RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 NUTM2FA1L443 756 aa19.08■□□□□ 0.64
APP-208ENST00000439274 TTC22Q5TAA0 569 aa19.08■□□□□ 0.64
APP-208ENST00000439274 GAS2L3Q86XJ1 694 aa19.08■□□□□ 0.64
APP-208ENST00000439274 RGS12O14924 1447 aa19.07■□□□□ 0.64
APP-208ENST00000439274 SMARCA5O60264 1052 aaPredicted RBP19.07■□□□□ 0.64
APP-208ENST00000439274 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
APP-208ENST00000439274 ADAMTSL3P82987 1691 aa19.07■□□□□ 0.64
APP-208ENST00000439274 ANKRD44Q8N8A2 993 aa19.06■□□□□ 0.64
APP-208ENST00000439274 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.06■□□□□ 0.64
APP-208ENST00000439274 SOX12O15370 315 aa19.06■□□□□ 0.64
APP-208ENST00000439274 MSH6P52701 1360 aa19.06■□□□□ 0.64
APP-208ENST00000439274 KIF24Q5T7B8 1368 aa19.06■□□□□ 0.64
APP-208ENST00000439274 CEP85Q6P2H3 762 aa19.05■□□□□ 0.64
APP-208ENST00000439274 CHL1O00533 1208 aa19.05■□□□□ 0.64
APP-208ENST00000439274 MEIS3Q99687 375 aa19.05■□□□□ 0.64
APP-208ENST00000439274 ARHGAP23Q9P227 1491 aa19.04■□□□□ 0.64
APP-208ENST00000439274 HSP90AB2PQ58FF8 381 aa19.04■□□□□ 0.64
APP-208ENST00000439274 MIS18AQ9NYP9 233 aa19.04■□□□□ 0.64
APP-208ENST00000439274 SLIT1O75093 1534 aa19.04■□□□□ 0.64
APP-208ENST00000439274 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
APP-208ENST00000439274 AKAP12Q02952 1782 aa19.04■□□□□ 0.64
APP-208ENST00000439274 ITSN1Q15811 1721 aa19.03■□□□□ 0.64
APP-208ENST00000439274 LTKP29376 864 aa19.03■□□□□ 0.64
APP-208ENST00000439274 TTC21BQ7Z4L5 1316 aa19.03■□□□□ 0.64
APP-208ENST00000439274 NRKQ7Z2Y5 1582 aa19.02■□□□□ 0.64
APP-208ENST00000439274 RTL1A6NKG5 1358 aa19.02■□□□□ 0.64
APP-208ENST00000439274 USP26Q9BXU7 913 aa19.02■□□□□ 0.64
APP-208ENST00000439274 ROBO2Q9HCK4 1378 aa19.02■□□□□ 0.64
APP-208ENST00000439274 SDSP20132 328 aa19.02■□□□□ 0.63
APP-208ENST00000439274 ACEP12821 1306 aa19.01■□□□□ 0.63
APP-208ENST00000439274 AK9Q5TCS8 1911 aa19.01■□□□□ 0.63
APP-208ENST00000439274 RABEP1Q15276 862 aa19.01■□□□□ 0.63
APP-208ENST00000439274 RPAP2Q8IXW5 612 aaPredicted RBP19.01■□□□□ 0.63
APP-208ENST00000439274 TECPR2O15040 1411 aa19■□□□□ 0.63
APP-208ENST00000439274 FOXO3O43524 673 aa19■□□□□ 0.63
APP-208ENST00000439274 SKOR2Q2VWA4 1001 aaPredicted RBP19■□□□□ 0.63
APP-208ENST00000439274 PLEKHG1Q9ULL1 1385 aa19■□□□□ 0.63
APP-208ENST00000439274 SLC4A2P04920 1241 aa19■□□□□ 0.63
APP-208ENST00000439274 CEP170BQ9Y4F5 1589 aaPredicted RBP18.99■□□□□ 0.63
APP-208ENST00000439274 BAG4O95429 457 aaKnown RBP18.99■□□□□ 0.63
APP-208ENST00000439274 G2E3Q7L622 706 aa18.98■□□□□ 0.63
APP-208ENST00000439274 SIRT1Q96EB6 747 aa18.98■□□□□ 0.63
APP-208ENST00000439274 ISY1Q9ULR0 285 aaKnown RBP18.98■□□□□ 0.63
APP-208ENST00000439274 PEAK1Q9H792 1746 aa18.98■□□□□ 0.63
APP-208ENST00000439274 KIAA0232Q92628 1395 aa18.98■□□□□ 0.63
APP-208ENST00000439274 F6X3S4 739 aa18.98■□□□□ 0.63
APP-208ENST00000439274 SLC4A10Q6U841 1118 aa18.98■□□□□ 0.63
APP-208ENST00000439274 PTPRCP08575 1304 aa18.97■□□□□ 0.63
APP-208ENST00000439274 OVOS2A0A0J9YW53 1432 aa18.97■□□□□ 0.63
APP-208ENST00000439274 CLCN1P35523 988 aa18.97■□□□□ 0.63
APP-208ENST00000439274 PKP1Q13835 747 aa18.97■□□□□ 0.63
APP-208ENST00000439274 OVOS2Q6IE36 1432 aa18.97■□□□□ 0.63
APP-208ENST00000439274 ERBB4Q15303 1308 aa18.97■□□□□ 0.63
APP-208ENST00000439274 CRB1P82279 1406 aa18.97■□□□□ 0.63
APP-208ENST00000439274 HDGFP51858 240 aaKnown RBP18.96■□□□□ 0.63
APP-208ENST00000439274 HAP1P54257 671 aaPredicted RBP18.96■□□□□ 0.63
APP-208ENST00000439274 PTMSP20962 102 aa18.96■□□□□ 0.63
APP-208ENST00000439274 ZNF142P52746 1687 aaPredicted RBP18.95■□□□□ 0.62
APP-208ENST00000439274 DDX49Q9Y6V7 483 aaKnown RBP18.95■□□□□ 0.62
APP-208ENST00000439274 MAP3K19Q56UN5 1328 aa18.95■□□□□ 0.62
APP-208ENST00000439274 GOLGA6L22H0YM25 854 aa18.95■□□□□ 0.62
APP-208ENST00000439274 PRKCSHP14314 528 aaPredicted RBP18.95■□□□□ 0.62
APP-208ENST00000439274 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
APP-208ENST00000439274 MTHFSDQ2M296 383 aaKnown RBP18.94■□□□□ 0.62
APP-208ENST00000439274 MCTP1Q6DN14 999 aa18.94■□□□□ 0.62
APP-208ENST00000439274 CLEC17AQ6ZS10 378 aa18.94■□□□□ 0.62
APP-208ENST00000439274 ZGPATQ8N5A5 531 aaKnown RBP18.94■□□□□ 0.62
APP-208ENST00000439274 TSPYL4Q9UJ04 414 aa18.94■□□□□ 0.62
APP-208ENST00000439274 PTPRUQ92729 1446 aa18.93■□□□□ 0.62
APP-208ENST00000439274 TSHZ3Q63HK5 1081 aa18.93■□□□□ 0.62
APP-208ENST00000439274 CASC1Q6TDU7 716 aa18.93■□□□□ 0.62
APP-208ENST00000439274 USP6P35125 1406 aa18.93■□□□□ 0.62
APP-208ENST00000439274 NAP1L5Q96NT1 182 aaPredicted RBP18.93■□□□□ 0.62
APP-208ENST00000439274 ESPNB1AK53 854 aa18.92■□□□□ 0.62
APP-208ENST00000439274 KLHL40Q2TBA0 621 aa18.92■□□□□ 0.62
APP-208ENST00000439274 RGPD1P0DJD0 1748 aa18.92■□□□□ 0.62
APP-208ENST00000439274 PLEKHG3A1L390 1219 aa18.91■□□□□ 0.62
APP-208ENST00000439274 EXOC6BQ9Y2D4 811 aa18.91■□□□□ 0.62
APP-208ENST00000439274 CYP2E1P05181 493 aaPredicted RBP18.91■□□□□ 0.62
APP-208ENST00000439274 RTF1Q92541 710 aaKnown RBP18.9■□□□□ 0.62
APP-208ENST00000439274 TRIM44Q96DX7 344 aaPredicted RBP18.9■□□□□ 0.62
APP-208ENST00000439274 HMMRO75330 724 aa18.9■□□□□ 0.62
APP-208ENST00000439274 NCLP19338 710 aaKnown RBP18.9■□□□□ 0.62
APP-208ENST00000439274 PDE1AP54750 535 aa18.9■□□□□ 0.62
APP-208ENST00000439274 NUCB2P80303 420 aa18.9■□□□□ 0.62
APP-208ENST00000439274 SLC26A8Q96RN1 970 aa18.9■□□□□ 0.62
APP-208ENST00000439274 USP31Q70CQ4 1352 aa18.89■□□□□ 0.62
APP-208ENST00000439274 ERC2O15083 957 aa18.89■□□□□ 0.61
APP-208ENST00000439274 ST18O60284 1047 aa18.89■□□□□ 0.61
APP-208ENST00000439274 NECTIN2Q92692 538 aa18.89■□□□□ 0.61
APP-208ENST00000439274 CHAMP1Q96JM3 812 aa18.89■□□□□ 0.61
APP-208ENST00000439274 TOPAZ1Q8N9V7 1692 aa18.89■□□□□ 0.61
APP-208ENST00000439274 REC8O95072 547 aa18.89■□□□□ 0.61
APP-208ENST00000439274 THEMISQ8N1K5 641 aaPredicted RBP18.89■□□□□ 0.61
APP-208ENST00000439274 EID1Q9Y6B2 187 aa18.89■□□□□ 0.61
APP-208ENST00000439274 DIP2AQ14689 1571 aa18.88■□□□□ 0.61
APP-208ENST00000439274 LMBRD1Q9NUN5 540 aa18.88■□□□□ 0.61
APP-208ENST00000439274 NALCNQ8IZF0 1738 aa18.88■□□□□ 0.61
APP-208ENST00000439274 NASPP49321 788 aaPredicted RBP18.88■□□□□ 0.61
APP-208ENST00000439274 CAVIN1Q6NZI2 390 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms