RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ATF7IPQ6VMQ6 1270 aa17.75■□□□□ 0.43
TSC2-206ENST00000439117 NME9Q86XW9 330 aa17.75■□□□□ 0.43
TSC2-206ENST00000439117 TNMDQ9H2S6 317 aa17.75■□□□□ 0.43
TSC2-206ENST00000439117 TMCO3Q6UWJ1 677 aa17.74■□□□□ 0.43
TSC2-206ENST00000439117 ZNF428Q96B54 188 aa17.74■□□□□ 0.43
TSC2-206ENST00000439117 CGNQ9P2M7 1197 aaKnown RBP17.74■□□□□ 0.43
TSC2-206ENST00000439117 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
TSC2-206ENST00000439117 PTPRKQ15262 1439 aa17.74■□□□□ 0.43
TSC2-206ENST00000439117 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
TSC2-206ENST00000439117 MPNDQ8N594 471 aa17.74■□□□□ 0.43
TSC2-206ENST00000439117 KRT85P78386 507 aa17.73■□□□□ 0.43
TSC2-206ENST00000439117 SRCIN1Q9C0H9 1055 aa17.73■□□□□ 0.43
TSC2-206ENST00000439117 ZNF396Q96N95 335 aaPredicted RBP17.73■□□□□ 0.43
TSC2-206ENST00000439117 FMNL2Q96PY5 1086 aa17.73■□□□□ 0.43
TSC2-206ENST00000439117 FAM177BA6PVY3 158 aa17.73■□□□□ 0.43
TSC2-206ENST00000439117 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
TSC2-206ENST00000439117 KIAA0556O60303 1618 aa17.73■□□□□ 0.43
TSC2-206ENST00000439117 TNRQ92752 1358 aa17.73■□□□□ 0.43
TSC2-206ENST00000439117 A2MP01023 1474 aa17.73■□□□□ 0.43
TSC2-206ENST00000439117 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
TSC2-206ENST00000439117 DUOX2Q9NRD8 1548 aa17.72■□□□□ 0.43
TSC2-206ENST00000439117 FOXO3O43524 673 aa17.72■□□□□ 0.43
TSC2-206ENST00000439117 PDIA4P13667 645 aaKnown RBP17.72■□□□□ 0.43
TSC2-206ENST00000439117 CNTROBQ8N137 903 aa17.72■□□□□ 0.43
TSC2-206ENST00000439117 WASHC4Q2M389 1173 aa17.72■□□□□ 0.43
TSC2-206ENST00000439117 ZNF518AQ6AHZ1 1483 aa17.72■□□□□ 0.43
TSC2-206ENST00000439117 PIP4K2AP48426 406 aaPredicted RBP17.71■□□□□ 0.43
TSC2-206ENST00000439117 GNAT3A8MTJ3 354 aa17.71■□□□□ 0.43
TSC2-206ENST00000439117 PIP4K2BP78356 416 aa17.71■□□□□ 0.43
TSC2-206ENST00000439117 SYCP2Q9BX26 1530 aa17.71■□□□□ 0.43
TSC2-206ENST00000439117 GOLGA6L10A6NI86 522 aa17.71■□□□□ 0.43
TSC2-206ENST00000439117 BTBD11A6QL63 1104 aa17.71■□□□□ 0.43
TSC2-206ENST00000439117 ERC1Q8IUD2 1116 aa17.71■□□□□ 0.43
TSC2-206ENST00000439117 TTLL5Q6EMB2 1281 aa17.71■□□□□ 0.43
TSC2-206ENST00000439117 MAPK8IP2Q13387 824 aaPredicted RBP17.7■□□□□ 0.42
TSC2-206ENST00000439117 SLFN5Q08AF3 891 aa17.7■□□□□ 0.42
TSC2-206ENST00000439117 ZHX1Q9UKY1 873 aaPredicted RBP17.7■□□□□ 0.42
TSC2-206ENST00000439117 CTTNBP2Q8WZ74 1663 aa17.7■□□□□ 0.42
TSC2-206ENST00000439117 OFD1O75665 1012 aa17.7■□□□□ 0.42
TSC2-206ENST00000439117 VPS53Q5VIR6 699 aa17.7■□□□□ 0.42
TSC2-206ENST00000439117 GIMAP7Q8NHV1 300 aa17.7■□□□□ 0.42
TSC2-206ENST00000439117 FSD1Q9BTV5 496 aa17.7■□□□□ 0.42
TSC2-206ENST00000439117 GBP3Q9H0R5 595 aa17.7■□□□□ 0.42
TSC2-206ENST00000439117 RALYLQ86SE5 291 aaKnown RBP17.69■□□□□ 0.42
TSC2-206ENST00000439117 SERPINC1P01008 464 aa17.69■□□□□ 0.42
TSC2-206ENST00000439117 ITSN2Q9NZM3 1697 aa17.69■□□□□ 0.42
TSC2-206ENST00000439117 CBFA2T2O43439 604 aa17.69■□□□□ 0.42
TSC2-206ENST00000439117 MVPQ14764 893 aaKnown RBP17.69■□□□□ 0.42
TSC2-206ENST00000439117 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
TSC2-206ENST00000439117 TRAPPC8Q9Y2L5 1435 aa17.69■□□□□ 0.42
TSC2-206ENST00000439117 SYCE3A1L190 88 aa17.68■□□□□ 0.42
TSC2-206ENST00000439117 SKIDA1Q1XH10 827 aa17.68■□□□□ 0.42
TSC2-206ENST00000439117 NFXL1Q6ZNB6 911 aa17.68■□□□□ 0.42
TSC2-206ENST00000439117 PRIMPOLQ96LW4 560 aa17.68■□□□□ 0.42
TSC2-206ENST00000439117 PLCD4Q9BRC7 762 aa17.68■□□□□ 0.42
TSC2-206ENST00000439117 ERICH2A1L162 156 aa17.68■□□□□ 0.42
TSC2-206ENST00000439117 PTPN14Q15678 1187 aa17.68■□□□□ 0.42
TSC2-206ENST00000439117 MYL6BP14649 208 aa17.67■□□□□ 0.42
TSC2-206ENST00000439117 NUP62CLQ9H1M0 184 aa17.67■□□□□ 0.42
TSC2-206ENST00000439117 FOSBP53539 338 aa17.67■□□□□ 0.42
TSC2-206ENST00000439117 CEP57L1Q8IYX8 460 aa17.67■□□□□ 0.42
TSC2-206ENST00000439117 JMYQ8N9B5 988 aa17.67■□□□□ 0.42
TSC2-206ENST00000439117 KIF18AQ8NI77 898 aa17.67■□□□□ 0.42
TSC2-206ENST00000439117 FAM107BQ9H098 131 aa17.67■□□□□ 0.42
TSC2-206ENST00000439117 FILIP1Q7Z7B0 1213 aa17.67■□□□□ 0.42
TSC2-206ENST00000439117 RAD21O60216 631 aa17.67■□□□□ 0.42
TSC2-206ENST00000439117 HIP1O00291 1037 aa17.66■□□□□ 0.42
TSC2-206ENST00000439117 ZRSR2Q15696 482 aaKnown RBP17.66■□□□□ 0.42
TSC2-206ENST00000439117 EIF4G3O43432 1585 aaKnown RBP17.66■□□□□ 0.42
TSC2-206ENST00000439117 WDR62O43379 1518 aa17.66■□□□□ 0.42
TSC2-206ENST00000439117 STK38Q15208 465 aa17.66■□□□□ 0.42
TSC2-206ENST00000439117 CCDC102AQ96A19 550 aa17.66■□□□□ 0.42
TSC2-206ENST00000439117 TBC1D2BQ9UPU7 963 aa17.66■□□□□ 0.42
TSC2-206ENST00000439117 PPFIBP1Q86W92 1011 aa17.66■□□□□ 0.42
TSC2-206ENST00000439117 THUMPD2Q9BTF0 503 aaKnown RBP17.66■□□□□ 0.42
TSC2-206ENST00000439117 NUP160Q12769 1436 aa17.66■□□□□ 0.42
TSC2-206ENST00000439117 INCENPQ9NQS7 918 aa17.66■□□□□ 0.42
TSC2-206ENST00000439117 KIF21AQ7Z4S6 1674 aa17.65■□□□□ 0.42
TSC2-206ENST00000439117 PRM3Q9NNZ6 103 aa17.65■□□□□ 0.42
TSC2-206ENST00000439117 ANKRD1Q15327 319 aa17.65■□□□□ 0.42
TSC2-206ENST00000439117 NSD2O96028 1365 aa17.65■□□□□ 0.42
TSC2-206ENST00000439117 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
TSC2-206ENST00000439117 ZNHIT6Q9NWK9 470 aaKnown RBP17.65■□□□□ 0.42
TSC2-206ENST00000439117 ERLIN2O94905 339 aa17.65■□□□□ 0.42
TSC2-206ENST00000439117 MCM10Q7L590 875 aa17.65■□□□□ 0.42
TSC2-206ENST00000439117 DACH1Q9UI36 760 aa17.65■□□□□ 0.42
TSC2-206ENST00000439117 UHRF1BP1LA0JNW5 1464 aa17.64■□□□□ 0.42
TSC2-206ENST00000439117 ABCC10Q5T3U5 1492 aa17.64■□□□□ 0.41
TSC2-206ENST00000439117 DHX16O60231 1041 aaKnown RBP17.64■□□□□ 0.41
TSC2-206ENST00000439117 AMOTQ4VCS5 1084 aa17.64■□□□□ 0.41
TSC2-206ENST00000439117 IQCEQ6IPM2 695 aa17.64■□□□□ 0.41
TSC2-206ENST00000439117 TIGD1Q96MW7 591 aa17.64■□□□□ 0.41
TSC2-206ENST00000439117 LRRCC1Q9C099 1032 aa17.64■□□□□ 0.41
TSC2-206ENST00000439117 CNNM1Q9NRU3 951 aa17.64■□□□□ 0.41
TSC2-206ENST00000439117 PPP4R3BQ5MIZ7 849 aa17.64■□□□□ 0.41
TSC2-206ENST00000439117 DNAJC2Q99543 621 aaKnown RBP17.64■□□□□ 0.41
TSC2-206ENST00000439117 DISP3Q9P2K9 1392 aa17.64■□□□□ 0.41
TSC2-206ENST00000439117 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
TSC2-206ENST00000439117 CYP46A1Q9Y6A2 500 aa17.63■□□□□ 0.41
TSC2-206ENST00000439117 XBP1P17861 261 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms