RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 TOMM70O94826 608 aa14.15□□□□□ -0.14
SMPD4-208ENST00000439029 SMIM5Q71RC9 77 aa14.15□□□□□ -0.14
SMPD4-208ENST00000439029 NMRK2Q9NPI5 230 aa14.15□□□□□ -0.14
SMPD4-208ENST00000439029 NSD2O96028 1365 aa14.14□□□□□ -0.15
SMPD4-208ENST00000439029 ANKRD36BQ8N2N9 1353 aa14.13□□□□□ -0.15
SMPD4-208ENST00000439029 RAB3GAP2Q9H2M9 1393 aa14.13□□□□□ -0.15
SMPD4-208ENST00000439029 KLRG1Q96E93 195 aa14.13□□□□□ -0.15
SMPD4-208ENST00000439029 TTC21AQ8NDW8 1320 aa14.13□□□□□ -0.15
SMPD4-208ENST00000439029 NME9Q86XW9 330 aa14.12□□□□□ -0.15
SMPD4-208ENST00000439029 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
SMPD4-208ENST00000439029 LY75O60449 1722 aa14.12□□□□□ -0.15
SMPD4-208ENST00000439029 DOT1LQ8TEK3 1739 aa14.12□□□□□ -0.15
SMPD4-208ENST00000439029 EVC2Q86UK5 1308 aa14.11□□□□□ -0.15
SMPD4-208ENST00000439029 KTN1Q86UP2 1357 aaKnown RBP14.1□□□□□ -0.15
SMPD4-208ENST00000439029 WDR90Q96KV7 1748 aa14.1□□□□□ -0.15
SMPD4-208ENST00000439029 PHF14O94880 888 aa14.1□□□□□ -0.15
SMPD4-208ENST00000439029 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
SMPD4-208ENST00000439029 USP47Q96K76 1375 aa14.09□□□□□ -0.15
SMPD4-208ENST00000439029 JMYQ8N9B5 988 aa14.09□□□□□ -0.15
SMPD4-208ENST00000439029 LTN1O94822 1766 aa14.09□□□□□ -0.15
SMPD4-208ENST00000439029 KIAA1210Q9ULL0 1709 aa14.08□□□□□ -0.16
SMPD4-208ENST00000439029 ZCRB1Q8TBF4 217 aaKnown RBP14.07□□□□□ -0.16
SMPD4-208ENST00000439029 ARHGAP27Q6ZUM4 889 aa14.06□□□□□ -0.16
SMPD4-208ENST00000439029 C16orf71Q8IYS4 520 aaPredicted RBP14.06□□□□□ -0.16
SMPD4-208ENST00000439029 BCS1LQ9Y276 419 aa14.06□□□□□ -0.16
SMPD4-208ENST00000439029 C5P01031 1676 aa14.05□□□□□ -0.16
SMPD4-208ENST00000439029 FLAD1Q8NFF5 587 aa14.05□□□□□ -0.16
SMPD4-208ENST00000439029 RBM46Q8TBY0 533 aaKnown RBP14.05□□□□□ -0.16
SMPD4-208ENST00000439029 AK7Q96M32 723 aa14.05□□□□□ -0.16
SMPD4-208ENST00000439029 USP31Q70CQ4 1352 aa14.05□□□□□ -0.16
SMPD4-208ENST00000439029 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.03□□□□□ -0.16
SMPD4-208ENST00000439029 IP6K1Q92551 441 aa14.03□□□□□ -0.16
SMPD4-208ENST00000439029 MEGF6O75095 1541 aa14.02□□□□□ -0.16
SMPD4-208ENST00000439029 PALLDQ8WX93 1383 aa14.02□□□□□ -0.17
SMPD4-208ENST00000439029 A0A0G2JLW4 131 aa14.02□□□□□ -0.17
SMPD4-208ENST00000439029 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
SMPD4-208ENST00000439029 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
SMPD4-208ENST00000439029 FBLN1P23142 703 aa14.02□□□□□ -0.17
SMPD4-208ENST00000439029 MPRIPQ6WCQ1 1025 aa14.02□□□□□ -0.17
SMPD4-208ENST00000439029 USHBP1Q8N6Y0 703 aa14.02□□□□□ -0.17
SMPD4-208ENST00000439029 USP54Q70EL1 1684 aa14.01□□□□□ -0.17
SMPD4-208ENST00000439029 C9orf131Q5VYM1 1079 aa14.01□□□□□ -0.17
SMPD4-208ENST00000439029 TMC1Q8TDI8 760 aa14.01□□□□□ -0.17
SMPD4-208ENST00000439029 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
SMPD4-208ENST00000439029 SBNO2Q9Y2G9 1366 aa14□□□□□ -0.17
SMPD4-208ENST00000439029 TAF1LQ8IZX4 1826 aa14□□□□□ -0.17
SMPD4-208ENST00000439029 SLC34A2O95436 690 aa14□□□□□ -0.17
SMPD4-208ENST00000439029 RRAGCQ9HB90 399 aa14□□□□□ -0.17
SMPD4-208ENST00000439029 RGPD2P0DJD1 1756 aa14□□□□□ -0.17
SMPD4-208ENST00000439029 MON2Q7Z3U7 1717 aa14□□□□□ -0.17
SMPD4-208ENST00000439029 TOGARAM1Q9Y4F4 1720 aa14□□□□□ -0.17
SMPD4-208ENST00000439029 PXDNLA1KZ92 1463 aa13.99□□□□□ -0.17
SMPD4-208ENST00000439029 N4BP2Q86UW6 1770 aaPredicted RBP13.99□□□□□ -0.17
SMPD4-208ENST00000439029 MMP10P09238 476 aa13.99□□□□□ -0.17
SMPD4-208ENST00000439029 FSTL1Q12841 308 aa13.99□□□□□ -0.17
SMPD4-208ENST00000439029 C4BP0C0L5 1744 aa13.98□□□□□ -0.17
SMPD4-208ENST00000439029 FCHSD2O94868 740 aa13.98□□□□□ -0.17
SMPD4-208ENST00000439029 KCPQ6ZWJ8 1503 aa13.98□□□□□ -0.17
SMPD4-208ENST00000439029 FAM208AQ9UK61 1670 aaKnown RBP13.98□□□□□ -0.17
SMPD4-208ENST00000439029 DPEP1P16444 411 aa13.97□□□□□ -0.17
SMPD4-208ENST00000439029 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
SMPD4-208ENST00000439029 MAP3K19Q56UN5 1328 aa13.96□□□□□ -0.17
SMPD4-208ENST00000439029 UBR3Q6ZT12 1888 aa13.96□□□□□ -0.17
SMPD4-208ENST00000439029 CD163L1Q9NR16 1453 aa13.96□□□□□ -0.17
SMPD4-208ENST00000439029 HOXC9P31274 260 aa13.96□□□□□ -0.17
SMPD4-208ENST00000439029 AMPHP49418 695 aa13.96□□□□□ -0.17
SMPD4-208ENST00000439029 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
SMPD4-208ENST00000439029 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
SMPD4-208ENST00000439029 SLC12A5Q9H2X9 1139 aa13.96□□□□□ -0.17
SMPD4-208ENST00000439029 PCNTO95613 3336 aa13.95□□□□□ -0.18
SMPD4-208ENST00000439029 GNPATO15228 680 aa13.95□□□□□ -0.18
SMPD4-208ENST00000439029 HDGFL2Q7Z4V5 671 aaPredicted RBP13.95□□□□□ -0.18
SMPD4-208ENST00000439029 SSFA2P28290 1259 aa13.94□□□□□ -0.18
SMPD4-208ENST00000439029 KIAA1551Q9HCM1 1747 aa13.94□□□□□ -0.18
SMPD4-208ENST00000439029 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
SMPD4-208ENST00000439029 KDM2BQ8NHM5 1336 aa13.93□□□□□ -0.18
SMPD4-208ENST00000439029 TGFB2P61812 414 aa13.93□□□□□ -0.18
SMPD4-208ENST00000439029 SMC1BQ8NDV3 1235 aa13.93□□□□□ -0.18
SMPD4-208ENST00000439029 RAPGEF4Q8WZA2 1011 aa13.93□□□□□ -0.18
SMPD4-208ENST00000439029 SMARCC1Q92922 1105 aaPredicted RBP13.93□□□□□ -0.18
SMPD4-208ENST00000439029 TATP17735 454 aaPredicted RBP13.92□□□□□ -0.18
SMPD4-208ENST00000439029 ITPK1Q13572 414 aa13.92□□□□□ -0.18
SMPD4-208ENST00000439029 PIGBQ92521 554 aa13.92□□□□□ -0.18
SMPD4-208ENST00000439029 LOC102724428A0A0B4J2F2 783 aa13.91□□□□□ -0.18
SMPD4-208ENST00000439029 CYP27B1O15528 508 aa13.91□□□□□ -0.18
SMPD4-208ENST00000439029 SIK1P57059 783 aa13.91□□□□□ -0.18
SMPD4-208ENST00000439029 L3MBTL2Q969R5 705 aa13.91□□□□□ -0.18
SMPD4-208ENST00000439029 PLEKHG2Q9H7P9 1386 aa13.91□□□□□ -0.18
SMPD4-208ENST00000439029 EDC4Q6P2E9 1401 aaKnown RBP13.9□□□□□ -0.18
SMPD4-208ENST00000439029 NSD3Q9BZ95 1437 aa13.9□□□□□ -0.18
SMPD4-208ENST00000439029 HMGB2P26583 209 aaKnown RBP13.9□□□□□ -0.18
SMPD4-208ENST00000439029 RRS1Q15050 365 aaKnown RBP13.9□□□□□ -0.18
SMPD4-208ENST00000439029 A0A1W2PP64 1363 aa13.9□□□□□ -0.18
SMPD4-208ENST00000439029 ROCK2O75116 1388 aaKnown RBP13.9□□□□□ -0.18
SMPD4-208ENST00000439029 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.19
SMPD4-208ENST00000439029 PCDH11XQ9BZA7 1347 aa13.9□□□□□ -0.19
SMPD4-208ENST00000439029 PCDH11YQ9BZA8 1340 aa13.9□□□□□ -0.19
SMPD4-208ENST00000439029 ATP6V1AP38606 617 aa13.89□□□□□ -0.19
SMPD4-208ENST00000439029 COG3Q96JB2 828 aa13.89□□□□□ -0.19
SMPD4-208ENST00000439029 ITGB4P16144 1822 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms