RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 LTV1Q96GA3 475 aaPredicted RBP12.41□□□□□ -0.42
SCRN1-208ENST00000438497 HMGB2P26583 209 aaKnown RBP12.4□□□□□ -0.42
SCRN1-208ENST00000438497 NME9Q86XW9 330 aa12.4□□□□□ -0.42
SCRN1-208ENST00000438497 ZCRB1Q8TBF4 217 aaKnown RBP12.4□□□□□ -0.42
SCRN1-208ENST00000438497 WWC3Q9ULE0 1092 aa12.4□□□□□ -0.42
SCRN1-208ENST00000438497 ADCY9O60503 1353 aa12.4□□□□□ -0.42
SCRN1-208ENST00000438497 ANKRD36BQ8N2N9 1353 aa12.4□□□□□ -0.42
SCRN1-208ENST00000438497 USP31Q70CQ4 1352 aa12.39□□□□□ -0.43
SCRN1-208ENST00000438497 TOMM70O94826 608 aa12.38□□□□□ -0.43
SCRN1-208ENST00000438497 IP6K1Q92551 441 aa12.38□□□□□ -0.43
SCRN1-208ENST00000438497 LY75O60449 1722 aa12.37□□□□□ -0.43
SCRN1-208ENST00000438497 CAPN15O75808 1086 aa12.37□□□□□ -0.43
SCRN1-208ENST00000438497 USP47Q96K76 1375 aa12.37□□□□□ -0.43
SCRN1-208ENST00000438497 LTN1O94822 1766 aa12.37□□□□□ -0.43
SCRN1-208ENST00000438497 IGSF1Q8N6C5 1336 aa12.37□□□□□ -0.43
SCRN1-208ENST00000438497 COL13A1Q5TAT6 717 aaPredicted RBP12.36□□□□□ -0.43
SCRN1-208ENST00000438497 TMC1Q8TDI8 760 aa12.36□□□□□ -0.43
SCRN1-208ENST00000438497 HDGFL2Q7Z4V5 671 aaPredicted RBP12.35□□□□□ -0.43
SCRN1-208ENST00000438497 NSD2O96028 1365 aa12.34□□□□□ -0.43
SCRN1-208ENST00000438497 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
SCRN1-208ENST00000438497 AMPHP49418 695 aa12.32□□□□□ -0.44
SCRN1-208ENST00000438497 TNS4Q8IZW8 715 aa12.32□□□□□ -0.44
SCRN1-208ENST00000438497 L3MBTL2Q969R5 705 aa12.32□□□□□ -0.44
SCRN1-208ENST00000438497 AK7Q96M32 723 aa12.32□□□□□ -0.44
SCRN1-208ENST00000438497 SLC12A5Q9H2X9 1139 aa12.32□□□□□ -0.44
SCRN1-208ENST00000438497 SBNO2Q9Y2G9 1366 aa12.31□□□□□ -0.44
SCRN1-208ENST00000438497 MPRIPQ6WCQ1 1025 aa12.31□□□□□ -0.44
SCRN1-208ENST00000438497 SMIM5Q71RC9 77 aa12.31□□□□□ -0.44
SCRN1-208ENST00000438497 KLRG1Q96E93 195 aa12.31□□□□□ -0.44
SCRN1-208ENST00000438497 PHF14O94880 888 aa12.3□□□□□ -0.44
SCRN1-208ENST00000438497 PRELPP51888 382 aa12.3□□□□□ -0.44
SCRN1-208ENST00000438497 ARHGAP27Q6ZUM4 889 aa12.3□□□□□ -0.44
SCRN1-208ENST00000438497 C16orf71Q8IYS4 520 aaPredicted RBP12.3□□□□□ -0.44
SCRN1-208ENST00000438497 NMRK2Q9NPI5 230 aa12.3□□□□□ -0.44
SCRN1-208ENST00000438497 TERF2IPQ9NYB0 399 aa12.3□□□□□ -0.44
SCRN1-208ENST00000438497 MON2Q7Z3U7 1717 aa12.3□□□□□ -0.44
SCRN1-208ENST00000438497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.29□□□□□ -0.44
SCRN1-208ENST00000438497 FBLN1P23142 703 aa12.29□□□□□ -0.44
SCRN1-208ENST00000438497 HOXC9P31274 260 aa12.29□□□□□ -0.44
SCRN1-208ENST00000438497 HTRA3P83110 453 aa12.29□□□□□ -0.44
SCRN1-208ENST00000438497 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
SCRN1-208ENST00000438497 RBM46Q8TBY0 533 aaKnown RBP12.29□□□□□ -0.44
SCRN1-208ENST00000438497 RAPGEF4Q8WZA2 1011 aa12.29□□□□□ -0.44
SCRN1-208ENST00000438497 SMARCC1Q92922 1105 aaPredicted RBP12.29□□□□□ -0.44
SCRN1-208ENST00000438497 TATP17735 454 aaPredicted RBP12.28□□□□□ -0.44
SCRN1-208ENST00000438497 NBPF6Q5VWK0 638 aa12.28□□□□□ -0.44
SCRN1-208ENST00000438497 AMIGO3Q86WK7 504 aa12.28□□□□□ -0.44
SCRN1-208ENST00000438497 NBPF4Q96M43 638 aa12.28□□□□□ -0.44
SCRN1-208ENST00000438497 BCS1LQ9Y276 419 aa12.28□□□□□ -0.44
SCRN1-208ENST00000438497 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
SCRN1-208ENST00000438497 C5P01031 1676 aa12.28□□□□□ -0.44
SCRN1-208ENST00000438497 USP54Q70EL1 1684 aa12.28□□□□□ -0.44
SCRN1-208ENST00000438497 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
SCRN1-208ENST00000438497 A0A0G2JLW4 131 aa12.27□□□□□ -0.45
SCRN1-208ENST00000438497 TGFB2P61812 414 aa12.27□□□□□ -0.45
SCRN1-208ENST00000438497 COG3Q96JB2 828 aa12.27□□□□□ -0.45
SCRN1-208ENST00000438497 MAP3K19Q56UN5 1328 aa12.27□□□□□ -0.45
SCRN1-208ENST00000438497 RGPD2P0DJD1 1756 aa12.27□□□□□ -0.45
SCRN1-208ENST00000438497 TAF1LQ8IZX4 1826 aa12.27□□□□□ -0.45
SCRN1-208ENST00000438497 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
SCRN1-208ENST00000438497 FAM208AQ9UK61 1670 aaKnown RBP12.26□□□□□ -0.45
SCRN1-208ENST00000438497 SSFA2P28290 1259 aa12.26□□□□□ -0.45
SCRN1-208ENST00000438497 FSTL1Q12841 308 aa12.26□□□□□ -0.45
SCRN1-208ENST00000438497 USHBP1Q8N6Y0 703 aa12.26□□□□□ -0.45
SCRN1-208ENST00000438497 EDC4Q6P2E9 1401 aaKnown RBP12.26□□□□□ -0.45
SCRN1-208ENST00000438497 CD163L1Q9NR16 1453 aa12.26□□□□□ -0.45
SCRN1-208ENST00000438497 MEGF6O75095 1541 aa12.25□□□□□ -0.45
SCRN1-208ENST00000438497 WDR90Q96KV7 1748 aa12.25□□□□□ -0.45
SCRN1-208ENST00000438497 FCHSD2O94868 740 aa12.24□□□□□ -0.45
SCRN1-208ENST00000438497 MMP10P09238 476 aa12.24□□□□□ -0.45
SCRN1-208ENST00000438497 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
SCRN1-208ENST00000438497 NSD3Q9BZ95 1437 aa12.23□□□□□ -0.45
SCRN1-208ENST00000438497 PCDH11XQ9BZA7 1347 aa12.23□□□□□ -0.45
SCRN1-208ENST00000438497 PCDH11YQ9BZA8 1340 aa12.23□□□□□ -0.45
SCRN1-208ENST00000438497 C9orf131Q5VYM1 1079 aa12.23□□□□□ -0.45
SCRN1-208ENST00000438497 PIGBQ92521 554 aa12.23□□□□□ -0.45
SCRN1-208ENST00000438497 RRAGCQ9HB90 399 aa12.23□□□□□ -0.45
SCRN1-208ENST00000438497 GNPATO15228 680 aa12.22□□□□□ -0.45
SCRN1-208ENST00000438497 CYP27B1O15528 508 aa12.22□□□□□ -0.45
SCRN1-208ENST00000438497 NEUROD1Q13562 356 aa12.22□□□□□ -0.45
SCRN1-208ENST00000438497 NLGN1Q8N2Q7 840 aa12.22□□□□□ -0.45
SCRN1-208ENST00000438497 SIN3AQ96ST3 1273 aa12.22□□□□□ -0.45
SCRN1-208ENST00000438497 UBR3Q6ZT12 1888 aa12.22□□□□□ -0.45
SCRN1-208ENST00000438497 A0A1W2PP64 1363 aa12.21□□□□□ -0.45
SCRN1-208ENST00000438497 N4BP2Q86UW6 1770 aaPredicted RBP12.21□□□□□ -0.45
SCRN1-208ENST00000438497 KDM2BQ8NHM5 1336 aa12.21□□□□□ -0.45
SCRN1-208ENST00000438497 LOC102724428A0A0B4J2F2 783 aa12.21□□□□□ -0.45
SCRN1-208ENST00000438497 DPEP1P16444 411 aa12.21□□□□□ -0.45
SCRN1-208ENST00000438497 ATP6V1AP38606 617 aa12.21□□□□□ -0.45
SCRN1-208ENST00000438497 SIK1P57059 783 aa12.21□□□□□ -0.45
SCRN1-208ENST00000438497 TMF1P82094 1093 aa12.21□□□□□ -0.45
SCRN1-208ENST00000438497 RRS1Q15050 365 aaKnown RBP12.21□□□□□ -0.45
SCRN1-208ENST00000438497 TRAPPC3LQ5T215 181 aa12.21□□□□□ -0.45
SCRN1-208ENST00000438497 LINC00116Q8NCU8 138 aa12.21□□□□□ -0.45
SCRN1-208ENST00000438497 PUS7Q96PZ0 661 aaKnown RBP12.21□□□□□ -0.45
SCRN1-208ENST00000438497 CARD11Q9BXL7 1154 aa12.2□□□□□ -0.46
SCRN1-208ENST00000438497 CCDC87Q9NVE4 849 aa12.2□□□□□ -0.46
SCRN1-208ENST00000438497 ITGB4P16144 1822 aa12.2□□□□□ -0.46
SCRN1-208ENST00000438497 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
SCRN1-208ENST00000438497 PIM2Q9P1W9 311 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms