RNA–Protein interactions for RNA: ENST00000438015.5

CHEK1-204, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHEK1, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-204ENST00000438015 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
CHEK1-204ENST00000438015 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-204ENST00000438015 AIMP1Q12904 312 aaKnown RBP13.18□□□□□ -0.3
CHEK1-204ENST00000438015 FAM173BQ6P4H8 233 aa13.18□□□□□ -0.3
CHEK1-204ENST00000438015 FAM177A1Q8N128 213 aaPredicted RBP13.18□□□□□ -0.3
CHEK1-204ENST00000438015 JAKMIP1Q96N16 626 aaKnown RBP13.18□□□□□ -0.3
CHEK1-204ENST00000438015 MBD5Q9P267 1494 aa13.18□□□□□ -0.3
CHEK1-204ENST00000438015 NCKAP5LQ9HCH0 1330 aa13.18□□□□□ -0.3
CHEK1-204ENST00000438015 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
CHEK1-204ENST00000438015 SKIDA1Q1XH10 827 aa13.18□□□□□ -0.3
CHEK1-204ENST00000438015 STK11IPQ8N1F8 1099 aa13.18□□□□□ -0.3
CHEK1-204ENST00000438015 MRPL50Q8N5N7 158 aaKnown RBP13.18□□□□□ -0.3
CHEK1-204ENST00000438015 NECAB1Q8N987 351 aa13.18□□□□□ -0.3
CHEK1-204ENST00000438015 MX1P20591 662 aa13.17□□□□□ -0.3
CHEK1-204ENST00000438015 SF3A1Q15459 793 aaKnown RBP13.17□□□□□ -0.3
CHEK1-204ENST00000438015 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
CHEK1-204ENST00000438015 LARP1BQ659C4 914 aaKnown RBP13.17□□□□□ -0.3
CHEK1-204ENST00000438015 DDX11Q96FC9 970 aa13.17□□□□□ -0.3
CHEK1-204ENST00000438015 SIL1Q9H173 461 aa13.17□□□□□ -0.3
CHEK1-204ENST00000438015 IFIT2P09913 472 aaKnown RBP13.17□□□□□ -0.3
CHEK1-204ENST00000438015 NRDCO43847 1150 aa13.17□□□□□ -0.3
CHEK1-204ENST00000438015 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.31e-9■■□□□ 14.5
CHEK1-204ENST00000438015 RPAP2Q8IXW5 612 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-204ENST00000438015 SAMD9Q5K651 1589 aa13.16□□□□□ -0.3
CHEK1-204ENST00000438015 WDR7Q9Y4E6 1490 aa13.16□□□□□ -0.3
CHEK1-204ENST00000438015 CCDC112Q8NEF3 446 aa13.16□□□□□ -0.3
CHEK1-204ENST00000438015 TNMDQ9H2S6 317 aa13.16□□□□□ -0.3
CHEK1-204ENST00000438015 CCDC192P0DO97 292 aa13.16□□□□□ -0.3
CHEK1-204ENST00000438015 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.16□□□□□ -0.3
CHEK1-204ENST00000438015 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
CHEK1-204ENST00000438015 RAPGEF6Q8TEU7 1601 aa13.15□□□□□ -0.3
CHEK1-204ENST00000438015 SYCP2Q9BX26 1530 aa13.15□□□□□ -0.3
CHEK1-204ENST00000438015 PRPF40BQ6NWY9 871 aaKnown RBP13.15□□□□□ -0.3
CHEK1-204ENST00000438015 LRRFIP2Q9Y608 721 aaKnown RBP13.15□□□□□ -0.3
CHEK1-204ENST00000438015 DISP1Q96F81 1524 aa13.14□□□□□ -0.31
CHEK1-204ENST00000438015 ANXA1P04083 346 aa13.14□□□□□ -0.31
CHEK1-204ENST00000438015 PDE1AP54750 535 aa13.14□□□□□ -0.31
CHEK1-204ENST00000438015 DNM1Q05193 864 aaKnown RBP13.14□□□□□ -0.31
CHEK1-204ENST00000438015 PPP1R9BQ96SB3 815 aa13.14□□□□□ -0.31
CHEK1-204ENST00000438015 MCM2P49736 904 aa13.14□□□□□ -0.31
CHEK1-204ENST00000438015 ZFP91Q96JP5 570 aaPredicted RBP13.14□□□□□ -0.31
CHEK1-204ENST00000438015 PALD1Q9ULE6 856 aa13.14□□□□□ -0.31
CHEK1-204ENST00000438015 CCDC183Q5T5S1 534 aa13.13□□□□□ -0.31
CHEK1-204ENST00000438015 SIRT2Q8IXJ6 389 aa13.13□□□□□ -0.31
CHEK1-204ENST00000438015 ZNF445P59923 1031 aa13.13□□□□□ -0.31
CHEK1-204ENST00000438015 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
CHEK1-204ENST00000438015 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
CHEK1-204ENST00000438015 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
CHEK1-204ENST00000438015 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
CHEK1-204ENST00000438015 SDF4Q9BRK5 362 aa13.13□□□□□ -0.31
CHEK1-204ENST00000438015 TNNT1P13805 278 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 PTGS1P23219 599 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 NUP62CLQ9H1M0 184 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 DCTPP1Q9H773 170 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 MRC2Q9UBG0 1479 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 FOXO3O43524 673 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 STX6O43752 255 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 IDI1Q13907 227 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 G2E3Q7L622 706 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 GPATCH3Q96I76 525 aa13.12□□□□□ -0.31
CHEK1-204ENST00000438015 VGLL3A8MV65 326 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 CEP85Q6P2H3 762 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 CCDC94Q9BW85 323 aaPredicted RBP13.11□□□□□ -0.31
CHEK1-204ENST00000438015 TMX1Q9H3N1 280 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 C14orf93Q9H972 538 aaKnown RBP13.11□□□□□ -0.31
CHEK1-204ENST00000438015 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 LUZP1Q86V48 1076 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 CNTROBQ8N137 903 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 BBXQ8WY36 941 aaPredicted RBP13.11□□□□□ -0.31
CHEK1-204ENST00000438015 TRAPPC8Q9Y2L5 1435 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 PLA2R1Q13018 1463 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 GNAI3P08754 354 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 GUCY1B3Q02153 619 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 KIF2CQ99661 725 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 PDRG1Q9NUG6 133 aa13.11□□□□□ -0.31
CHEK1-204ENST00000438015 SMC2O95347 1197 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 GJB2P29033 226 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 ANKRD44Q8N8A2 993 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 SPATA32Q96LK8 384 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 KRT85P78386 507 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 HDGFL1Q5TGJ6 251 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 CYP46A1Q9Y6A2 500 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 CLASRPQ8N2M8 674 aaKnown RBP13.1□□□□□ -0.31
CHEK1-204ENST00000438015 ESYT1Q9BSJ8 1104 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 SRCIN1Q9C0H9 1055 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 RIOK3O14730 519 aaKnown RBP13.1□□□□□ -0.31
CHEK1-204ENST00000438015 RUFY2Q8WXA3 655 aa13.1□□□□□ -0.31
CHEK1-204ENST00000438015 MAP3K11Q16584 847 aa13.09□□□□□ -0.31
CHEK1-204ENST00000438015 CFAP65Q6ZU64 1925 aaKnown RBP13.09□□□□□ -0.31
CHEK1-204ENST00000438015 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
CHEK1-204ENST00000438015 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.32
CHEK1-204ENST00000438015 ISM2Q6H9L7 571 aa13.08□□□□□ -0.32
CHEK1-204ENST00000438015 IFT140Q96RY7 1462 aa13.08□□□□□ -0.32
CHEK1-204ENST00000438015 HTATSF1O43719 755 aaKnown RBP13.08□□□□□ -0.32
CHEK1-204ENST00000438015 MCM5P33992 734 aa13.08□□□□□ -0.32
CHEK1-204ENST00000438015 HSP90AB2PQ58FF8 381 aa13.08□□□□□ -0.32
CHEK1-204ENST00000438015 PLCD3Q8N3E9 789 aa13.08□□□□□ -0.32
CHEK1-204ENST00000438015 PPIP5K1Q6PFW1 1433 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms