RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 QSER1Q2KHR3 1735 aa20.13■□□□□ 0.81
TNFRSF1A-203ENST00000437813 STK32BQ9NY57 414 aa20.13■□□□□ 0.81
TNFRSF1A-203ENST00000437813 NSD3Q9BZ95 1437 aa20.12■□□□□ 0.81
TNFRSF1A-203ENST00000437813 FLT4P35916 1363 aa20.12■□□□□ 0.81
TNFRSF1A-203ENST00000437813 HSP90AB2PQ58FF8 381 aa20.12■□□□□ 0.81
TNFRSF1A-203ENST00000437813 DDX54Q8TDD1 881 aaKnown RBP20.12■□□□□ 0.81
TNFRSF1A-203ENST00000437813 COL24A1Q17RW2 1714 aa20.11■□□□□ 0.81
TNFRSF1A-203ENST00000437813 ZNF827Q17R98 1081 aa20.11■□□□□ 0.81
TNFRSF1A-203ENST00000437813 ZCRB1Q8TBF4 217 aaKnown RBP20.11■□□□□ 0.81
TNFRSF1A-203ENST00000437813 ZBTB7AO95365 584 aa20.1■□□□□ 0.81
TNFRSF1A-203ENST00000437813 TUBGCP6Q96RT7 1819 aa20.1■□□□□ 0.81
TNFRSF1A-203ENST00000437813 CGNL1Q0VF96 1302 aa20.09■□□□□ 0.81
TNFRSF1A-203ENST00000437813 AKT1S1Q96B36 256 aa20.09■□□□□ 0.81
TNFRSF1A-203ENST00000437813 PKD1L3Q7Z443 1732 aa20.08■□□□□ 0.81
TNFRSF1A-203ENST00000437813 PRIM1P49642 420 aaKnown RBP20.08■□□□□ 0.81
TNFRSF1A-203ENST00000437813 USHBP1Q8N6Y0 703 aa20.08■□□□□ 0.81
TNFRSF1A-203ENST00000437813 SLC27A3Q5K4L6 730 aa20.07■□□□□ 0.8
TNFRSF1A-203ENST00000437813 PCGF6Q9BYE7 350 aa20.07■□□□□ 0.8
TNFRSF1A-203ENST00000437813 MTFR1LQ9H019 292 aa20.07■□□□□ 0.8
TNFRSF1A-203ENST00000437813 PPP1R1BQ9UD71 204 aaPredicted RBP20.07■□□□□ 0.8
TNFRSF1A-203ENST00000437813 EMILIN1Q9Y6C2 1016 aa20.07■□□□□ 0.8
TNFRSF1A-203ENST00000437813 SMG6Q86US8 1419 aaKnown RBP20.07■□□□□ 0.8
TNFRSF1A-203ENST00000437813 MAP2P11137 1827 aaKnown RBP20.06■□□□□ 0.8
TNFRSF1A-203ENST00000437813 ATF5Q9Y2D1 282 aaPredicted RBP20.06■□□□□ 0.8
TNFRSF1A-203ENST00000437813 TOGARAM1Q9Y4F4 1720 aa20.05■□□□□ 0.8
TNFRSF1A-203ENST00000437813 WASHC2AQ641Q2 1341 aa20.02■□□□□ 0.8
TNFRSF1A-203ENST00000437813 CYP27B1O15528 508 aa20.02■□□□□ 0.8
TNFRSF1A-203ENST00000437813 KCNQ4P56696 695 aa20.02■□□□□ 0.8
TNFRSF1A-203ENST00000437813 RAPGEF4Q8WZA2 1011 aa20.02■□□□□ 0.8
TNFRSF1A-203ENST00000437813 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.79
TNFRSF1A-203ENST00000437813 MAP3K5Q99683 1374 aa20.01■□□□□ 0.79
TNFRSF1A-203ENST00000437813 ITGB4P16144 1822 aa20.01■□□□□ 0.79
TNFRSF1A-203ENST00000437813 TATP17735 454 aaPredicted RBP20■□□□□ 0.79
TNFRSF1A-203ENST00000437813 SYTL4Q96C24 671 aaPredicted RBP20■□□□□ 0.79
TNFRSF1A-203ENST00000437813 POLKQ9UBT6 870 aa20■□□□□ 0.79
TNFRSF1A-203ENST00000437813 PCDH11XQ9BZA7 1347 aa20■□□□□ 0.79
TNFRSF1A-203ENST00000437813 PCDH11YQ9BZA8 1340 aa20■□□□□ 0.79
TNFRSF1A-203ENST00000437813 HSPA5P11021 654 aaKnown RBP19.99■□□□□ 0.79
TNFRSF1A-203ENST00000437813 SYT17Q9BSW7 474 aa19.99■□□□□ 0.79
TNFRSF1A-203ENST00000437813 FHDC1Q9C0D6 1143 aaPredicted RBP19.99■□□□□ 0.79
TNFRSF1A-203ENST00000437813 TAF1LQ8IZX4 1826 aa19.99■□□□□ 0.79
TNFRSF1A-203ENST00000437813 C5P01031 1676 aa19.97■□□□□ 0.79
TNFRSF1A-203ENST00000437813 SLC16A10Q8TF71 515 aa19.97■□□□□ 0.79
TNFRSF1A-203ENST00000437813 EIF4G2P78344 907 aaKnown RBP eCLIP19.96■□□□□ 0.79
TNFRSF1A-203ENST00000437813 NKX1-1Q15270 411 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1A-203ENST00000437813 EYA1Q99502 592 aa19.96■□□□□ 0.79
TNFRSF1A-203ENST00000437813 ARXQ96QS3 562 aa19.95■□□□□ 0.78
TNFRSF1A-203ENST00000437813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.94■□□□□ 0.78
TNFRSF1A-203ENST00000437813 CCNL1Q9UK58 526 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1A-203ENST00000437813 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
TNFRSF1A-203ENST00000437813 UTRNP46939 3433 aa19.93■□□□□ 0.78
TNFRSF1A-203ENST00000437813 PPM1GO15355 546 aaPredicted RBP19.92■□□□□ 0.78
TNFRSF1A-203ENST00000437813 YY1P25490 414 aa19.92■□□□□ 0.78
TNFRSF1A-203ENST00000437813 PANK3Q9H999 370 aa19.92■□□□□ 0.78
TNFRSF1A-203ENST00000437813 PALLDQ8WX93 1383 aa19.92■□□□□ 0.78
TNFRSF1A-203ENST00000437813 EIF4A2Q14240 407 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1A-203ENST00000437813 TFCP2L1Q9NZI6 479 aa19.91■□□□□ 0.78
TNFRSF1A-203ENST00000437813 IGSF1Q8N6C5 1336 aa19.9■□□□□ 0.78
TNFRSF1A-203ENST00000437813 C4BP0C0L5 1744 aa19.9■□□□□ 0.78
TNFRSF1A-203ENST00000437813 COL23A1Q86Y22 540 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1A-203ENST00000437813 PIGBQ92521 554 aa19.89■□□□□ 0.77
TNFRSF1A-203ENST00000437813 UBR3Q6ZT12 1888 aa19.88■□□□□ 0.77
TNFRSF1A-203ENST00000437813 MPRIPQ6WCQ1 1025 aa19.88■□□□□ 0.77
TNFRSF1A-203ENST00000437813 CCER1Q8TC90 406 aaPredicted RBP19.88■□□□□ 0.77
TNFRSF1A-203ENST00000437813 SPG7Q9UQ90 795 aa19.88■□□□□ 0.77
TNFRSF1A-203ENST00000437813 CHD4Q14839 1912 aa19.87■□□□□ 0.77
TNFRSF1A-203ENST00000437813 AMIGO3Q86WK7 504 aa19.87■□□□□ 0.77
TNFRSF1A-203ENST00000437813 PHKG2P15735 406 aa19.86■□□□□ 0.77
TNFRSF1A-203ENST00000437813 TNNT2P45379 298 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1A-203ENST00000437813 POLR3GLQ9BT43 218 aa19.86■□□□□ 0.77
TNFRSF1A-203ENST00000437813 DCAF8L1A6NGE4 600 aa19.85■□□□□ 0.77
TNFRSF1A-203ENST00000437813 SMARCC1Q92922 1105 aaPredicted RBP19.84■□□□□ 0.77
TNFRSF1A-203ENST00000437813 GOLGB1Q14789 3259 aaKnown RBP19.84■□□□□ 0.77
TNFRSF1A-203ENST00000437813 ZNF831Q5JPB2 1677 aa19.83■□□□□ 0.76
TNFRSF1A-203ENST00000437813 POLD1P28340 1107 aa19.82■□□□□ 0.76
TNFRSF1A-203ENST00000437813 AMER1Q5JTC6 1135 aaPredicted RBP19.82■□□□□ 0.76
TNFRSF1A-203ENST00000437813 IFNL2Q8IZJ0 200 aa19.82■□□□□ 0.76
TNFRSF1A-203ENST00000437813 NLGN2Q8NFZ4 835 aa19.81■□□□□ 0.76
TNFRSF1A-203ENST00000437813 ASAP1Q9ULH1 1129 aa19.81■□□□□ 0.76
TNFRSF1A-203ENST00000437813 KDRP35968 1356 aa19.81■□□□□ 0.76
TNFRSF1A-203ENST00000437813 KIF7Q2M1P5 1343 aa19.8■□□□□ 0.76
TNFRSF1A-203ENST00000437813 KDM6AO15550 1401 aaPredicted RBP19.8■□□□□ 0.76
TNFRSF1A-203ENST00000437813 LOC102724428A0A0B4J2F2 783 aa19.8■□□□□ 0.76
TNFRSF1A-203ENST00000437813 SIK1P57059 783 aa19.8■□□□□ 0.76
TNFRSF1A-203ENST00000437813 HMGB2P26583 209 aaKnown RBP19.79■□□□□ 0.76
TNFRSF1A-203ENST00000437813 ITPK1Q13572 414 aa19.79■□□□□ 0.76
TNFRSF1A-203ENST00000437813 LINC00116Q8NCU8 138 aa19.79■□□□□ 0.76
TNFRSF1A-203ENST00000437813 FLAD1Q8NFF5 587 aa19.78■□□□□ 0.76
TNFRSF1A-203ENST00000437813 ATG3Q9NT62 314 aa19.78■□□□□ 0.76
TNFRSF1A-203ENST00000437813 TMOD3Q9NYL9 352 aa19.78■□□□□ 0.76
TNFRSF1A-203ENST00000437813 PER1O15534 1290 aaPredicted RBP19.77■□□□□ 0.76
TNFRSF1A-203ENST00000437813 SMIM5Q71RC9 77 aa19.77■□□□□ 0.76
TNFRSF1A-203ENST00000437813 MORC1Q86VD1 984 aa19.77■□□□□ 0.76
TNFRSF1A-203ENST00000437813 AEBP1Q8IUX7 1158 aa19.77■□□□□ 0.76
TNFRSF1A-203ENST00000437813 SLC4A9Q96Q91 983 aa19.77■□□□□ 0.76
TNFRSF1A-203ENST00000437813 COL5A3P25940 1745 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF1A-203ENST00000437813 MSL1Q68DK7 614 aa19.76■□□□□ 0.75
TNFRSF1A-203ENST00000437813 ZNF784Q8NCA9 323 aaPredicted RBP19.76■□□□□ 0.75
TNFRSF1A-203ENST00000437813 ERVV-2B6SEH9 535 aa19.75■□□□□ 0.75
TNFRSF1A-203ENST00000437813 IL13P35225 146 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms