RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 RIMBP3Q9UFD9 1639 aa15.29■□□□□ 0.04
TMEM116-202ENST00000437003 EDC4Q6P2E9 1401 aaKnown RBP15.28■□□□□ 0.04
TMEM116-202ENST00000437003 NCKAP5LQ9HCH0 1330 aa15.28■□□□□ 0.04
TMEM116-202ENST00000437003 CDC42BPGQ6DT37 1551 aa15.28■□□□□ 0.04
TMEM116-202ENST00000437003 KLHL40Q2TBA0 621 aa15.28■□□□□ 0.04
TMEM116-202ENST00000437003 SETD1AO15047 1707 aaKnown RBP15.28■□□□□ 0.04
TMEM116-202ENST00000437003 CCDC61Q9Y6R9 512 aa15.28■□□□□ 0.04
TMEM116-202ENST00000437003 CPSF1Q10570 1443 aaKnown RBP15.28■□□□□ 0.04
TMEM116-202ENST00000437003 IL13P35225 146 aa15.27■□□□□ 0.04
TMEM116-202ENST00000437003 COG3Q96JB2 828 aa15.27■□□□□ 0.04
TMEM116-202ENST00000437003 CALD1Q05682 793 aaKnown RBP15.27■□□□□ 0.03
TMEM116-202ENST00000437003 RRS1Q15050 365 aaKnown RBP15.27■□□□□ 0.03
TMEM116-202ENST00000437003 ZBTB7CA1YPR0 619 aa15.26■□□□□ 0.03
TMEM116-202ENST00000437003 HDGFP51858 240 aaKnown RBP15.26■□□□□ 0.03
TMEM116-202ENST00000437003 TBC1D9Q6ZT07 1266 aa15.26■□□□□ 0.03
TMEM116-202ENST00000437003 UQCRHLA0A096LP55 91 aa15.26■□□□□ 0.03
TMEM116-202ENST00000437003 UQCRHP07919 91 aa15.26■□□□□ 0.03
TMEM116-202ENST00000437003 ZNF428Q96B54 188 aa15.26■□□□□ 0.03
TMEM116-202ENST00000437003 FAM83GA6ND36 823 aa15.25■□□□□ 0.03
TMEM116-202ENST00000437003 DCTN1Q14203 1278 aa15.25■□□□□ 0.03
TMEM116-202ENST00000437003 VAMP4O75379 141 aa15.25■□□□□ 0.03
TMEM116-202ENST00000437003 BMP2KLQ5H9B9 411 aa15.25■□□□□ 0.03
TMEM116-202ENST00000437003 RBSNQ9H1K0 784 aa15.25■□□□□ 0.03
TMEM116-202ENST00000437003 MBIPQ9NS73 344 aa15.25■□□□□ 0.03
TMEM116-202ENST00000437003 GNAI1P63096 354 aa15.24■□□□□ 0.03
TMEM116-202ENST00000437003 ZSCAN23Q3MJ62 389 aa15.24■□□□□ 0.03
TMEM116-202ENST00000437003 PKP1Q13835 747 aa15.24■□□□□ 0.03
TMEM116-202ENST00000437003 PRDM4Q9UKN5 801 aa15.24■□□□□ 0.03
TMEM116-202ENST00000437003 NRXN3Q9Y4C0 1643 aa15.24■□□□□ 0.03
TMEM116-202ENST00000437003 ZBTB7BO15156 539 aaPredicted RBP15.24■□□□□ 0.03
TMEM116-202ENST00000437003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.24■□□□□ 0.03
TMEM116-202ENST00000437003 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
TMEM116-202ENST00000437003 MRPL50Q8N5N7 158 aaKnown RBP15.23■□□□□ 0.03
TMEM116-202ENST00000437003 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
TMEM116-202ENST00000437003 RBM27Q9P2N5 1060 aaKnown RBP15.23■□□□□ 0.03
TMEM116-202ENST00000437003 CDK12Q9NYV4 1490 aaPredicted RBP15.23■□□□□ 0.03
TMEM116-202ENST00000437003 AATKQ6ZMQ8 1374 aa15.23■□□□□ 0.03
TMEM116-202ENST00000437003 PRIM1P49642 420 aaKnown RBP15.23■□□□□ 0.03
TMEM116-202ENST00000437003 TWISTNBQ3B726 338 aaPredicted RBP15.23■□□□□ 0.03
TMEM116-202ENST00000437003 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.23■□□□□ 0.03
TMEM116-202ENST00000437003 C8orf58Q8NAV2 365 aa15.22■□□□□ 0.03
TMEM116-202ENST00000437003 CHAMP1Q96JM3 812 aa15.22■□□□□ 0.03
TMEM116-202ENST00000437003 PRDM10Q9NQV6 1147 aa15.22■□□□□ 0.03
TMEM116-202ENST00000437003 NOL7Q9UMY1 257 aaKnown RBP15.22■□□□□ 0.03
TMEM116-202ENST00000437003 SIRT1Q96EB6 747 aa15.21■□□□□ 0.03
TMEM116-202ENST00000437003 NUTM2FA1L443 756 aa15.21■□□□□ 0.03
TMEM116-202ENST00000437003 ZNF445P59923 1031 aa15.21■□□□□ 0.03
TMEM116-202ENST00000437003 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
TMEM116-202ENST00000437003 IBTKQ9P2D0 1353 aaPredicted RBP15.21■□□□□ 0.02
TMEM116-202ENST00000437003 CPS1P31327 1500 aa15.2■□□□□ 0.02
TMEM116-202ENST00000437003 SOX12O15370 315 aa15.2■□□□□ 0.02
TMEM116-202ENST00000437003 PRPF40AO75400 957 aaKnown RBP15.2■□□□□ 0.02
TMEM116-202ENST00000437003 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
TMEM116-202ENST00000437003 HSP90B1P14625 803 aaKnown RBP15.2■□□□□ 0.02
TMEM116-202ENST00000437003 ARHGAP45Q92619 1136 aa15.2■□□□□ 0.02
TMEM116-202ENST00000437003 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
TMEM116-202ENST00000437003 SIRT2Q8IXJ6 389 aa15.19■□□□□ 0.02
TMEM116-202ENST00000437003 CHMP4BQ9H444 224 aaKnown RBP15.19■□□□□ 0.02
TMEM116-202ENST00000437003 LMBRD1Q9NUN5 540 aa15.19■□□□□ 0.02
TMEM116-202ENST00000437003 PRR36Q9H6K5 1346 aa15.19■□□□□ 0.02
TMEM116-202ENST00000437003 TERF1P54274 439 aa15.19■□□□□ 0.02
TMEM116-202ENST00000437003 FOXD4L5Q5VV16 416 aaPredicted RBP15.19■□□□□ 0.02
TMEM116-202ENST00000437003 FOXD4L4Q8WXT5 416 aaPredicted RBP15.19■□□□□ 0.02
TMEM116-202ENST00000437003 MAP7D2Q96T17 732 aa15.19■□□□□ 0.02
TMEM116-202ENST00000437003 TNRQ92752 1358 aa15.18■□□□□ 0.02
TMEM116-202ENST00000437003 APBB1O00213 710 aa15.18■□□□□ 0.02
TMEM116-202ENST00000437003 ZNF500O60304 480 aaPredicted RBP15.18■□□□□ 0.02
TMEM116-202ENST00000437003 KRT24Q2M2I5 525 aa15.18■□□□□ 0.02
TMEM116-202ENST00000437003 RNF214Q8ND24 703 aa15.18■□□□□ 0.02
TMEM116-202ENST00000437003 GCC1Q96CN9 775 aa15.18■□□□□ 0.02
TMEM116-202ENST00000437003 TECPR2O15040 1411 aa15.18■□□□□ 0.02
TMEM116-202ENST00000437003 CLEC17AQ6ZS10 378 aa15.18■□□□□ 0.02
TMEM116-202ENST00000437003 ZKSCAN5Q9Y2L8 839 aa15.18■□□□□ 0.02
TMEM116-202ENST00000437003 TMEM2Q9UHN6 1383 aa15.17■□□□□ 0.02
TMEM116-202ENST00000437003 ROBO2Q9HCK4 1378 aa15.17■□□□□ 0.02
TMEM116-202ENST00000437003 AEBP1Q8IUX7 1158 aa15.17■□□□□ 0.02
TMEM116-202ENST00000437003 PDLIM2Q96JY6 352 aa15.17■□□□□ 0.02
TMEM116-202ENST00000437003 SYCE3A1L190 88 aa15.16■□□□□ 0.02
TMEM116-202ENST00000437003 HS1BP3Q53T59 392 aa15.16■□□□□ 0.02
TMEM116-202ENST00000437003 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
TMEM116-202ENST00000437003 GPT2Q8TD30 523 aa15.16■□□□□ 0.02
TMEM116-202ENST00000437003 MON2Q7Z3U7 1717 aa15.16■□□□□ 0.02
TMEM116-202ENST00000437003 CDC45O75419 566 aa15.16■□□□□ 0.02
TMEM116-202ENST00000437003 NUCB2P80303 420 aa15.16■□□□□ 0.02
TMEM116-202ENST00000437003 SULT6B1Q6IMI4 303 aa15.16■□□□□ 0.02
TMEM116-202ENST00000437003 ZHX1Q9UKY1 873 aaPredicted RBP15.16■□□□□ 0.02
TMEM116-202ENST00000437003 PTCH1Q13635 1447 aa15.15■□□□□ 0.02
TMEM116-202ENST00000437003 MPNDQ8N594 471 aa15.15■□□□□ 0.02
TMEM116-202ENST00000437003 DLG5Q8TDM6 1919 aa15.15■□□□□ 0.02
TMEM116-202ENST00000437003 ABCC4O15439 1325 aa15.15■□□□□ 0.02
TMEM116-202ENST00000437003 KNDC1Q76NI1 1749 aa15.15■□□□□ 0.02
TMEM116-202ENST00000437003 BCCIPQ9P287 314 aaKnown RBP eCLIP15.15■□□□□ 0.02
TMEM116-202ENST00000437003 ACEP12821 1306 aa15.15■□□□□ 0.02
TMEM116-202ENST00000437003 EIF4A2Q14240 407 aaKnown RBP15.14■□□□□ 0.01
TMEM116-202ENST00000437003 JARID2Q92833 1246 aaPredicted RBP15.14■□□□□ 0.01
TMEM116-202ENST00000437003 NSFL1CQ9UNZ2 370 aaKnown RBP15.14■□□□□ 0.01
TMEM116-202ENST00000437003 TTC21BQ7Z4L5 1316 aa15.14■□□□□ 0.01
TMEM116-202ENST00000437003 ITSN1Q15811 1721 aa15.14■□□□□ 0.01
TMEM116-202ENST00000437003 GSPT1P15170 499 aaKnown RBP15.14■□□□□ 0.01
TMEM116-202ENST00000437003 PIK3R4Q99570 1358 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms