RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ZNHIT6Q9NWK9 470 aaKnown RBP18.78■□□□□ 0.6
PTPN13-204ENST00000436978 CFAP65Q6ZU64 1925 aaKnown RBP18.78■□□□□ 0.6
PTPN13-204ENST00000436978 AKAP2Q9Y2D5 859 aa18.78■□□□□ 0.6
PTPN13-204ENST00000436978 ZNF771Q7L3S4 317 aaPredicted RBP18.78■□□□□ 0.6
PTPN13-204ENST00000436978 CHD1LQ86WJ1 897 aa18.78■□□□□ 0.6
PTPN13-204ENST00000436978 CDCA7LQ96GN5 454 aa18.78■□□□□ 0.6
PTPN13-204ENST00000436978 TRIM5Q9C035 493 aa18.78■□□□□ 0.6
PTPN13-204ENST00000436978 SLC26A8Q96RN1 970 aa18.77■□□□□ 0.6
PTPN13-204ENST00000436978 FKBP4Q02790 459 aaKnown RBP eCLIP18.77■□□□□ 0.6
PTPN13-204ENST00000436978 RAB11FIP3O75154 756 aa18.77■□□□□ 0.6
PTPN13-204ENST00000436978 NCOA1Q15788 1441 aa18.77■□□□□ 0.6
PTPN13-204ENST00000436978 SRGAP3O43295 1099 aa18.77■□□□□ 0.59
PTPN13-204ENST00000436978 TDO2P48775 406 aa18.77■□□□□ 0.59
PTPN13-204ENST00000436978 NSD2O96028 1365 aa18.77■□□□□ 0.59
PTPN13-204ENST00000436978 FAM43AQ8N2R8 423 aa18.77■□□□□ 0.59
PTPN13-204ENST00000436978 FAM13BQ9NYF5 915 aa18.76■□□□□ 0.59
PTPN13-204ENST00000436978 PLB1Q6P1J6 1458 aa18.76■□□□□ 0.59
PTPN13-204ENST00000436978 PBRM1Q86U86 1689 aa18.76■□□□□ 0.59
PTPN13-204ENST00000436978 PIP4K2BP78356 416 aa18.76■□□□□ 0.59
PTPN13-204ENST00000436978 PPP6R1Q9UPN7 881 aa18.76■□□□□ 0.59
PTPN13-204ENST00000436978 NKTRP30414 1462 aaKnown RBP18.76■□□□□ 0.59
PTPN13-204ENST00000436978 CEP126Q9P2H0 1117 aa18.76■□□□□ 0.59
PTPN13-204ENST00000436978 TMOD3Q9NYL9 352 aa18.76■□□□□ 0.59
PTPN13-204ENST00000436978 UBAC1Q9BSL1 405 aa18.76■□□□□ 0.59
PTPN13-204ENST00000436978 DENND4BO75064 1496 aaPredicted RBP18.75■□□□□ 0.59
PTPN13-204ENST00000436978 CFAP43Q8NDM7 1665 aa18.75■□□□□ 0.59
PTPN13-204ENST00000436978 CFAP45Q9UL16 551 aa18.75■□□□□ 0.59
PTPN13-204ENST00000436978 ZPR1O75312 459 aa18.75■□□□□ 0.59
PTPN13-204ENST00000436978 ZSCAN31Q96LW9 406 aaPredicted RBP18.75■□□□□ 0.59
PTPN13-204ENST00000436978 DUOX2Q9NRD8 1548 aa18.75■□□□□ 0.59
PTPN13-204ENST00000436978 CCDC192P0DO97 292 aa18.75■□□□□ 0.59
PTPN13-204ENST00000436978 DCTN1Q14203 1278 aa18.74■□□□□ 0.59
PTPN13-204ENST00000436978 CAVIN1Q6NZI2 390 aaKnown RBP18.74■□□□□ 0.59
PTPN13-204ENST00000436978 TEX14Q8IWB6 1497 aa18.74■□□□□ 0.59
PTPN13-204ENST00000436978 KDM4AO75164 1064 aa18.74■□□□□ 0.59
PTPN13-204ENST00000436978 KRT85P78386 507 aa18.73■□□□□ 0.59
PTPN13-204ENST00000436978 K7ELQ4 463 aaPredicted RBP18.73■□□□□ 0.59
PTPN13-204ENST00000436978 NOM1Q5C9Z4 860 aaKnown RBP18.73■□□□□ 0.59
PTPN13-204ENST00000436978 LRP2BPQ9P2M1 347 aa18.73■□□□□ 0.59
PTPN13-204ENST00000436978 BLOC1S2Q6QNY1 142 aa18.73■□□□□ 0.59
PTPN13-204ENST00000436978 TRAK2O60296 914 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 SCAF11Q99590 1463 aaKnown RBP18.72■□□□□ 0.59
PTPN13-204ENST00000436978 TMPOP42166 694 aaKnown RBP18.72■□□□□ 0.59
PTPN13-204ENST00000436978 NFKBIBQ15653 356 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 CEP131Q9UPN4 1083 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 BCAR3O75815 825 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 IMMTQ16891 758 aaKnown RBP18.72■□□□□ 0.59
PTPN13-204ENST00000436978 TMOD2Q9NZR1 351 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 ERLIN2O94905 339 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 HSP90AB3PQ58FF7 597 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 ABCC5O15440 1437 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 NBPF8Q3BBV2 869 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 ATP2B1P20020 1258 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 RPAP2Q8IXW5 612 aaPredicted RBP18.72■□□□□ 0.59
PTPN13-204ENST00000436978 CBFA2T2O43439 604 aa18.72■□□□□ 0.59
PTPN13-204ENST00000436978 ALDH1L2Q3SY69 923 aa18.71■□□□□ 0.59
PTPN13-204ENST00000436978 LARP1Q6PKG0 1096 aaKnown RBP18.71■□□□□ 0.59
PTPN13-204ENST00000436978 MTERF4Q7Z6M4 381 aaKnown RBP18.71■□□□□ 0.59
PTPN13-204ENST00000436978 NUP133Q8WUM0 1156 aa18.71■□□□□ 0.59
PTPN13-204ENST00000436978 TRIM21P19474 475 aaKnown RBP18.71■□□□□ 0.59
PTPN13-204ENST00000436978 ME1P48163 572 aa18.71■□□□□ 0.59
PTPN13-204ENST00000436978 TNMDQ9H2S6 317 aa18.71■□□□□ 0.59
PTPN13-204ENST00000436978 RAI14Q9P0K7 980 aa18.71■□□□□ 0.59
PTPN13-204ENST00000436978 BMP2KQ9NSY1 1161 aaPredicted RBP18.71■□□□□ 0.58
PTPN13-204ENST00000436978 TTC21BQ7Z4L5 1316 aa18.7■□□□□ 0.58
PTPN13-204ENST00000436978 FIBPO43427 364 aa18.7■□□□□ 0.58
PTPN13-204ENST00000436978 CAVIN4Q5BKX8 364 aa18.7■□□□□ 0.58
PTPN13-204ENST00000436978 PDRG1Q9NUG6 133 aa18.7■□□□□ 0.58
PTPN13-204ENST00000436978 DESP17661 470 aa18.7■□□□□ 0.58
PTPN13-204ENST00000436978 AIDAQ96BJ3 306 aa18.7■□□□□ 0.58
PTPN13-204ENST00000436978 PPFIBP1Q86W92 1011 aa18.7■□□□□ 0.58
PTPN13-204ENST00000436978 PRPF40AO75400 957 aaKnown RBP18.69■□□□□ 0.58
PTPN13-204ENST00000436978 ZSCAN29Q8IWY8 852 aaPredicted RBP18.69■□□□□ 0.58
PTPN13-204ENST00000436978 SERPINC1P01008 464 aa18.69■□□□□ 0.58
PTPN13-204ENST00000436978 KIF1BPQ96EK5 621 aa18.69■□□□□ 0.58
PTPN13-204ENST00000436978 MAP4K4O95819 1239 aaPredicted RBP18.69■□□□□ 0.58
PTPN13-204ENST00000436978 U3KPZ7 1027 aaPredicted RBP18.69■□□□□ 0.58
PTPN13-204ENST00000436978 DNAI2Q9GZS0 605 aa18.68■□□□□ 0.58
PTPN13-204ENST00000436978 CEBPZQ03701 1054 aaKnown RBP18.68■□□□□ 0.58
PTPN13-204ENST00000436978 LARP1BQ659C4 914 aaKnown RBP18.68■□□□□ 0.58
PTPN13-204ENST00000436978 STK3Q13188 491 aa18.68■□□□□ 0.58
PTPN13-204ENST00000436978 TAF7Q15545 349 aaPredicted RBP18.68■□□□□ 0.58
PTPN13-204ENST00000436978 SEC63Q9UGP8 760 aaKnown RBP18.68■□□□□ 0.58
PTPN13-204ENST00000436978 PATL2C9JE40 543 aaKnown RBP18.68■□□□□ 0.58
PTPN13-204ENST00000436978 METTL24Q5JXM2 366 aa18.68■□□□□ 0.58
PTPN13-204ENST00000436978 MPHOSPH10O00566 681 aaKnown RBP18.67■□□□□ 0.58
PTPN13-204ENST00000436978 HYPKQ9NX55 129 aa18.67■□□□□ 0.58
PTPN13-204ENST00000436978 KDM5BQ9UGL1 1544 aa18.67■□□□□ 0.58
PTPN13-204ENST00000436978 BRPF1P55201 1214 aaPredicted RBP18.67■□□□□ 0.58
PTPN13-204ENST00000436978 CWC27Q6UX04 472 aaKnown RBP18.67■□□□□ 0.58
PTPN13-204ENST00000436978 SLF2Q8IX21 1173 aa18.67■□□□□ 0.58
PTPN13-204ENST00000436978 TNIP1Q15025 636 aa18.66■□□□□ 0.58
PTPN13-204ENST00000436978 CEP57L1Q8IYX8 460 aa18.66■□□□□ 0.58
PTPN13-204ENST00000436978 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
PTPN13-204ENST00000436978 URB2Q14146 1524 aaKnown RBP18.66■□□□□ 0.58
PTPN13-204ENST00000436978 PLEKHH1Q9ULM0 1364 aa18.66■□□□□ 0.58
PTPN13-204ENST00000436978 ZNF76P36508 570 aa18.66■□□□□ 0.58
PTPN13-204ENST00000436978 DUSP27Q5VZP5 1158 aa18.66■□□□□ 0.58
PTPN13-204ENST00000436978 TTLL5Q6EMB2 1281 aa18.66■□□□□ 0.58
PTPN13-204ENST00000436978 DEF6Q9H4E7 631 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms