RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 RGPD4Q7Z3J3 1758 aa22.12■■□□□ 1.13
SMPD4-207ENST00000435455 SHANK3Q9BYB0 1731 aa22.11■■□□□ 1.13
SMPD4-207ENST00000435455 NHSQ6T4R5 1651 aa22.11■■□□□ 1.13
SMPD4-207ENST00000435455 EZH2Q15910 746 aaKnown RBP22.1■■□□□ 1.13
SMPD4-207ENST00000435455 CC2D1BQ5T0F9 858 aaKnown RBP22.1■■□□□ 1.13
SMPD4-207ENST00000435455 EYA1Q99502 592 aa22.1■■□□□ 1.13
SMPD4-207ENST00000435455 RREB1Q92766 1687 aa22.09■■□□□ 1.13
SMPD4-207ENST00000435455 PLSCR1O15162 318 aa22.08■■□□□ 1.13
SMPD4-207ENST00000435455 PKD1L3Q7Z443 1732 aa22.06■■□□□ 1.12
SMPD4-207ENST00000435455 ZEB1P37275 1124 aaPredicted RBP22.06■■□□□ 1.12
SMPD4-207ENST00000435455 PTF1AQ7RTS3 328 aa22.06■■□□□ 1.12
SMPD4-207ENST00000435455 ACSBG1Q96GR2 724 aa22.06■■□□□ 1.12
SMPD4-207ENST00000435455 PCDH11XQ9BZA7 1347 aa22.06■■□□□ 1.12
SMPD4-207ENST00000435455 PCDH11YQ9BZA8 1340 aa22.06■■□□□ 1.12
SMPD4-207ENST00000435455 KCNQ2O43526 872 aa22.05■■□□□ 1.12
SMPD4-207ENST00000435455 IGSF1Q8N6C5 1336 aa22.05■■□□□ 1.12
SMPD4-207ENST00000435455 PLEKHG2Q9H7P9 1386 aa22.04■■□□□ 1.12
SMPD4-207ENST00000435455 NUP188Q5SRE5 1749 aa22.04■■□□□ 1.12
SMPD4-207ENST00000435455 BTAF1O14981 1849 aa22.03■■□□□ 1.12
SMPD4-207ENST00000435455 DOT1LQ8TEK3 1739 aa22.03■■□□□ 1.12
SMPD4-207ENST00000435455 MTHFSP49914 203 aa22.03■■□□□ 1.12
SMPD4-207ENST00000435455 CNGB1Q14028 1251 aaPredicted RBP22.02■■□□□ 1.12
SMPD4-207ENST00000435455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.02■■□□□ 1.12
SMPD4-207ENST00000435455 SPG7Q9UQ90 795 aa22.02■■□□□ 1.12
SMPD4-207ENST00000435455 NBPF14Q5TI25 921 aa21.99■■□□□ 1.11
SMPD4-207ENST00000435455 CYP27B1O15528 508 aa21.98■■□□□ 1.11
SMPD4-207ENST00000435455 IL13P35225 146 aa21.98■■□□□ 1.11
SMPD4-207ENST00000435455 PRIM1P49642 420 aaKnown RBP21.98■■□□□ 1.11
SMPD4-207ENST00000435455 SYTL4Q96C24 671 aaPredicted RBP21.97■■□□□ 1.11
SMPD4-207ENST00000435455 PSDA5PKW4 1024 aaPredicted RBP21.95■■□□□ 1.1
SMPD4-207ENST00000435455 R3HDM1Q15032 1099 aaKnown RBP21.95■■□□□ 1.1
SMPD4-207ENST00000435455 TXNRD1Q16881 649 aa21.95■■□□□ 1.1
SMPD4-207ENST00000435455 KDRP35968 1356 aa21.95■■□□□ 1.1
SMPD4-207ENST00000435455 DIAPH1O60610 1272 aaKnown RBP21.94■■□□□ 1.1
SMPD4-207ENST00000435455 NKX1-1Q15270 411 aaPredicted RBP21.94■■□□□ 1.1
SMPD4-207ENST00000435455 SULT6B1Q6IMI4 303 aa21.94■■□□□ 1.1
SMPD4-207ENST00000435455 PROM2Q8N271 834 aa21.94■■□□□ 1.1
SMPD4-207ENST00000435455 AMOTQ4VCS5 1084 aa21.93■■□□□ 1.1
SMPD4-207ENST00000435455 PLEKHO1Q53GL0 409 aaPredicted RBP21.93■■□□□ 1.1
SMPD4-207ENST00000435455 IFNL2Q8IZJ0 200 aa21.93■■□□□ 1.1
SMPD4-207ENST00000435455 AEBP1Q8IUX7 1158 aa21.92■■□□□ 1.1
SMPD4-207ENST00000435455 ITGB4P16144 1822 aa21.92■■□□□ 1.1
SMPD4-207ENST00000435455 TOGARAM1Q9Y4F4 1720 aa21.92■■□□□ 1.1
SMPD4-207ENST00000435455 COL3A1P02461 1466 aaPredicted RBP21.91■■□□□ 1.1
SMPD4-207ENST00000435455 PHKG2P15735 406 aa21.91■■□□□ 1.1
SMPD4-207ENST00000435455 CFAP53Q96M91 514 aa21.91■■□□□ 1.1
SMPD4-207ENST00000435455 SRCAPQ6ZRS2 3230 aa21.89■■□□□ 1.09
SMPD4-207ENST00000435455 LY75O60449 1722 aa21.89■■□□□ 1.09
SMPD4-207ENST00000435455 HSP90AB1P08238 724 aaKnown RBP21.88■■□□□ 1.09
SMPD4-207ENST00000435455 PPP2R1AP30153 589 aa21.88■■□□□ 1.09
SMPD4-207ENST00000435455 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
SMPD4-207ENST00000435455 ZNF530Q6P9A1 599 aaPredicted RBP21.88■■□□□ 1.09
SMPD4-207ENST00000435455 ANO8Q9HCE9 1232 aaPredicted RBP21.87■■□□□ 1.09
SMPD4-207ENST00000435455 DDX10Q13206 875 aaKnown RBP21.86■■□□□ 1.09
SMPD4-207ENST00000435455 MPRIPQ6WCQ1 1025 aa21.86■■□□□ 1.09
SMPD4-207ENST00000435455 STK32BQ9NY57 414 aa21.86■■□□□ 1.09
SMPD4-207ENST00000435455 HMOX1P09601 288 aa21.85■■□□□ 1.09
SMPD4-207ENST00000435455 C1orf141Q5JVX7 400 aa21.85■■□□□ 1.09
SMPD4-207ENST00000435455 LRP5O75197 1615 aa21.84■■□□□ 1.09
SMPD4-207ENST00000435455 PAPPAQ13219 1627 aa21.84■■□□□ 1.09
SMPD4-207ENST00000435455 U2SURPO15042 1029 aaKnown RBP21.84■■□□□ 1.09
SMPD4-207ENST00000435455 DCAF5Q96JK2 942 aa21.84■■□□□ 1.09
SMPD4-207ENST00000435455 PIGBQ92521 554 aa21.83■■□□□ 1.09
SMPD4-207ENST00000435455 SMARCC1Q92922 1105 aaPredicted RBP21.83■■□□□ 1.09
SMPD4-207ENST00000435455 LRRC4BQ9NT99 713 aa21.83■■□□□ 1.09
SMPD4-207ENST00000435455 TMOD3Q9NYL9 352 aa21.83■■□□□ 1.09
SMPD4-207ENST00000435455 NUDCQ9Y266 331 aa21.83■■□□□ 1.09
SMPD4-207ENST00000435455 ERVV-2B6SEH9 535 aa21.82■■□□□ 1.08
SMPD4-207ENST00000435455 SLC15A2Q16348 729 aa21.82■■□□□ 1.08
SMPD4-207ENST00000435455 HMGB2P26583 209 aaKnown RBP21.81■■□□□ 1.08
SMPD4-207ENST00000435455 PALLDQ8WX93 1383 aa21.81■■□□□ 1.08
SMPD4-207ENST00000435455 CCNL1Q9UK58 526 aaPredicted RBP21.8■■□□□ 1.08
SMPD4-207ENST00000435455 AKAP4Q5JQC9 854 aa21.79■■□□□ 1.08
SMPD4-207ENST00000435455 KDM6AO15550 1401 aaPredicted RBP21.79■■□□□ 1.08
SMPD4-207ENST00000435455 RALBP1Q15311 655 aa21.78■■□□□ 1.08
SMPD4-207ENST00000435455 CASZ1Q86V15 1759 aa21.78■■□□□ 1.08
SMPD4-207ENST00000435455 SCN11AQ9UI33 1791 aa21.78■■□□□ 1.08
SMPD4-207ENST00000435455 KCNQ4P56696 695 aa21.76■■□□□ 1.07
SMPD4-207ENST00000435455 CABP4P57796 275 aa21.76■■□□□ 1.07
SMPD4-207ENST00000435455 QSER1Q2KHR3 1735 aa21.76■■□□□ 1.07
SMPD4-207ENST00000435455 TAF1LQ8IZX4 1826 aa21.76■■□□□ 1.07
SMPD4-207ENST00000435455 C5P01031 1676 aa21.75■■□□□ 1.07
SMPD4-207ENST00000435455 ZNF827Q17R98 1081 aa21.75■■□□□ 1.07
SMPD4-207ENST00000435455 AKT1S1Q96B36 256 aa21.75■■□□□ 1.07
SMPD4-207ENST00000435455 VIRMAQ69YN4 1812 aaKnown RBP21.75■■□□□ 1.07
SMPD4-207ENST00000435455 U2AF1L5P0DN76 240 aaPredicted RBP21.74■■□□□ 1.07
SMPD4-207ENST00000435455 U2AF1Q01081 240 aaKnown RBP eCLIP21.74■■□□□ 1.07
SMPD4-207ENST00000435455 MTHFSDQ2M296 383 aaKnown RBP21.74■■□□□ 1.07
SMPD4-207ENST00000435455 ASAP1Q9ULH1 1129 aa21.74■■□□□ 1.07
SMPD4-207ENST00000435455 RSPH6AQ9H0K4 717 aa21.73■■□□□ 1.07
SMPD4-207ENST00000435455 SPON1Q9HCB6 807 aa21.73■■□□□ 1.07
SMPD4-207ENST00000435455 TUBGCP6Q96RT7 1819 aa21.72■■□□□ 1.07
SMPD4-207ENST00000435455 PRKAR2BP31323 418 aa21.72■■□□□ 1.07
SMPD4-207ENST00000435455 GAS2L2Q8NHY3 880 aa21.72■■□□□ 1.07
SMPD4-207ENST00000435455 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
SMPD4-207ENST00000435455 FCHSD2O94868 740 aa21.71■■□□□ 1.07
SMPD4-207ENST00000435455 SIK1P57059 783 aa21.71■■□□□ 1.07
SMPD4-207ENST00000435455 ATG3Q9NT62 314 aa21.71■■□□□ 1.07
SMPD4-207ENST00000435455 TFCP2L1Q9NZI6 479 aa21.71■■□□□ 1.07
SMPD4-207ENST00000435455 ADAMTS7Q9UKP4 1686 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms