RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
HLA-DQB2-231ENST00000435145 PTPRCP08575 1304 aa20.1■□□□□ 0.81
HLA-DQB2-231ENST00000435145 FLT4P35916 1363 aa20.1■□□□□ 0.81
HLA-DQB2-231ENST00000435145 XRN1Q8IZH2 1706 aaKnown RBP20.09■□□□□ 0.81
HLA-DQB2-231ENST00000435145 DDIT3P35638 169 aa20.09■□□□□ 0.81
HLA-DQB2-231ENST00000435145 CEBPAP49715 358 aaPredicted RBP20.09■□□□□ 0.81
HLA-DQB2-231ENST00000435145 HSCBQ8IWL3 235 aa20.09■□□□□ 0.81
HLA-DQB2-231ENST00000435145 ANKRD44Q8N8A2 993 aa20.09■□□□□ 0.81
HLA-DQB2-231ENST00000435145 TBC1D9Q6ZT07 1266 aa20.08■□□□□ 0.8
HLA-DQB2-231ENST00000435145 KIF2CQ99661 725 aa20.08■□□□□ 0.8
HLA-DQB2-231ENST00000435145 PIK3C2AO00443 1686 aa20.07■□□□□ 0.8
HLA-DQB2-231ENST00000435145 ANKARQ7Z5J8 1434 aa20.06■□□□□ 0.8
HLA-DQB2-231ENST00000435145 IGSF1Q8N6C5 1336 aa20.06■□□□□ 0.8
HLA-DQB2-231ENST00000435145 RPAP2Q8IXW5 612 aaPredicted RBP20.06■□□□□ 0.8
HLA-DQB2-231ENST00000435145 PLEKHM2Q8IWE5 1019 aa20.05■□□□□ 0.8
HLA-DQB2-231ENST00000435145 BRPF3Q9ULD4 1205 aa20.05■□□□□ 0.8
HLA-DQB2-231ENST00000435145 USP54Q70EL1 1684 aa20.05■□□□□ 0.8
HLA-DQB2-231ENST00000435145 RTL1A6NKG5 1358 aa20.05■□□□□ 0.8
HLA-DQB2-231ENST00000435145 MCM4P33991 863 aa20.05■□□□□ 0.8
HLA-DQB2-231ENST00000435145 MSH6P52701 1360 aa20.04■□□□□ 0.8
HLA-DQB2-231ENST00000435145 CEP170BQ9Y4F5 1589 aaPredicted RBP20.04■□□□□ 0.8
HLA-DQB2-231ENST00000435145 MTHFSDQ2M296 383 aaKnown RBP20.04■□□□□ 0.8
HLA-DQB2-231ENST00000435145 LRRC37A3O60309 1634 aa20.04■□□□□ 0.8
HLA-DQB2-231ENST00000435145 RGPD8O14715 1765 aaPredicted RBP20.04■□□□□ 0.8
HLA-DQB2-231ENST00000435145 CDC45O75419 566 aa20.03■□□□□ 0.8
HLA-DQB2-231ENST00000435145 GSPT1P15170 499 aaKnown RBP20.03■□□□□ 0.8
HLA-DQB2-231ENST00000435145 CEP85Q6P2H3 762 aa20.03■□□□□ 0.8
HLA-DQB2-231ENST00000435145 SPRYD3Q8NCJ5 442 aa20.03■□□□□ 0.8
HLA-DQB2-231ENST00000435145 EYA1Q99502 592 aa20.02■□□□□ 0.79
HLA-DQB2-231ENST00000435145 MARF1Q9Y4F3 1742 aaKnown RBP20.02■□□□□ 0.79
HLA-DQB2-231ENST00000435145 FOXO3O43524 673 aa20.01■□□□□ 0.79
HLA-DQB2-231ENST00000435145 THEMISQ8N1K5 641 aaPredicted RBP20.01■□□□□ 0.79
HLA-DQB2-231ENST00000435145 NGDNQ8NEJ9 315 aaKnown RBP20.01■□□□□ 0.79
HLA-DQB2-231ENST00000435145 FER1L4A9Z1Z3 1794 aa20■□□□□ 0.79
HLA-DQB2-231ENST00000435145 HTATSF1O43719 755 aaKnown RBP20■□□□□ 0.79
HLA-DQB2-231ENST00000435145 EIF5BO60841 1220 aaKnown RBP20■□□□□ 0.79
HLA-DQB2-231ENST00000435145 TTC22Q5TAA0 569 aa20■□□□□ 0.79
HLA-DQB2-231ENST00000435145 GAS2L2Q8NHY3 880 aa20■□□□□ 0.79
HLA-DQB2-231ENST00000435145 NWD1Q149M9 1564 aa20■□□□□ 0.79
HLA-DQB2-231ENST00000435145 SOX12O15370 315 aa20■□□□□ 0.79
HLA-DQB2-231ENST00000435145 CIZ1Q9ULV3 898 aaPredicted RBP20■□□□□ 0.79
HLA-DQB2-231ENST00000435145 SLC4A2P04920 1241 aa19.99■□□□□ 0.79
HLA-DQB2-231ENST00000435145 MEIS3Q99687 375 aa19.99■□□□□ 0.79
HLA-DQB2-231ENST00000435145 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
HLA-DQB2-231ENST00000435145 TSPYL4Q9UJ04 414 aa19.98■□□□□ 0.79
HLA-DQB2-231ENST00000435145 AMPHP49418 695 aa19.97■□□□□ 0.79
HLA-DQB2-231ENST00000435145 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
HLA-DQB2-231ENST00000435145 CCT4P50991 539 aaKnown RBP19.95■□□□□ 0.78
HLA-DQB2-231ENST00000435145 G2E3Q7L622 706 aa19.95■□□□□ 0.78
HLA-DQB2-231ENST00000435145 C16orf71Q8IYS4 520 aaPredicted RBP19.95■□□□□ 0.78
HLA-DQB2-231ENST00000435145 CD2BP2O95400 341 aaKnown RBP19.95■□□□□ 0.78
HLA-DQB2-231ENST00000435145 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
HLA-DQB2-231ENST00000435145 HOXC9P31274 260 aa19.94■□□□□ 0.78
HLA-DQB2-231ENST00000435145 SOS1Q07889 1333 aaPredicted RBP19.94■□□□□ 0.78
HLA-DQB2-231ENST00000435145 FAM208AQ9UK61 1670 aaKnown RBP19.94■□□□□ 0.78
HLA-DQB2-231ENST00000435145 K7ELQ4 463 aaPredicted RBP19.93■□□□□ 0.78
HLA-DQB2-231ENST00000435145 NLRP6P59044 892 aa19.93■□□□□ 0.78
HLA-DQB2-231ENST00000435145 OTUD7AQ8TE49 926 aaPredicted RBP19.93■□□□□ 0.78
HLA-DQB2-231ENST00000435145 DDX11L8A8MPP1 907 aa19.93■□□□□ 0.78
HLA-DQB2-231ENST00000435145 HSP90AB1P08238 724 aaKnown RBP19.93■□□□□ 0.78
HLA-DQB2-231ENST00000435145 KCNA6P17658 529 aa19.93■□□□□ 0.78
HLA-DQB2-231ENST00000435145 L1TD1Q5T7N2 865 aaKnown RBP19.93■□□□□ 0.78
HLA-DQB2-231ENST00000435145 FSD2A1L4K1 749 aa19.92■□□□□ 0.78
HLA-DQB2-231ENST00000435145 BABAM1Q9NWV8 329 aa19.92■□□□□ 0.78
HLA-DQB2-231ENST00000435145 HMMRO75330 724 aa19.92■□□□□ 0.78
HLA-DQB2-231ENST00000435145 RAB3GAP1Q15042 981 aa19.92■□□□□ 0.78
HLA-DQB2-231ENST00000435145 GNAT3A8MTJ3 354 aa19.91■□□□□ 0.78
HLA-DQB2-231ENST00000435145 TRAK2O60296 914 aa19.91■□□□□ 0.78
HLA-DQB2-231ENST00000435145 SDSP20132 328 aa19.9■□□□□ 0.78
HLA-DQB2-231ENST00000435145 RBM42Q9BTD8 480 aaKnown RBP19.9■□□□□ 0.78
HLA-DQB2-231ENST00000435145 USP26Q9BXU7 913 aa19.9■□□□□ 0.78
HLA-DQB2-231ENST00000435145 OSBPL3Q9H4L5 887 aa19.9■□□□□ 0.78
HLA-DQB2-231ENST00000435145 N4BP2Q86UW6 1770 aaPredicted RBP19.9■□□□□ 0.78
HLA-DQB2-231ENST00000435145 MAP3K5Q99683 1374 aa19.9■□□□□ 0.78
HLA-DQB2-231ENST00000435145 F6X3S4 739 aa19.9■□□□□ 0.78
HLA-DQB2-231ENST00000435145 RABEP1Q15276 862 aa19.89■□□□□ 0.77
HLA-DQB2-231ENST00000435145 TNPO1Q92973 898 aaKnown RBP19.89■□□□□ 0.77
HLA-DQB2-231ENST00000435145 SMARCA5O60264 1052 aaPredicted RBP19.88■□□□□ 0.77
HLA-DQB2-231ENST00000435145 STK31Q9BXU1 1019 aa19.88■□□□□ 0.77
HLA-DQB2-231ENST00000435145 CCDC30Q5VVM6 783 aa19.88■□□□□ 0.77
HLA-DQB2-231ENST00000435145 IL17REQ8NFR9 667 aa19.87■□□□□ 0.77
HLA-DQB2-231ENST00000435145 RTN4Q9NQC3 1192 aaKnown RBP19.87■□□□□ 0.77
HLA-DQB2-231ENST00000435145 PXDNLA1KZ92 1463 aa19.87■□□□□ 0.77
HLA-DQB2-231ENST00000435145 GNAI2P04899 355 aa19.86■□□□□ 0.77
HLA-DQB2-231ENST00000435145 FLIIQ13045 1269 aa19.86■□□□□ 0.77
HLA-DQB2-231ENST00000435145 CACNA1FO60840 1977 aa19.86■□□□□ 0.77
HLA-DQB2-231ENST00000435145 SALL3Q9BXA9 1300 aa19.86■□□□□ 0.77
HLA-DQB2-231ENST00000435145 SLC4A10Q6U841 1118 aa19.86■□□□□ 0.77
HLA-DQB2-231ENST00000435145 CLEC17AQ6ZS10 378 aa19.85■□□□□ 0.77
HLA-DQB2-231ENST00000435145 ABTB2Q8N961 1025 aa19.85■□□□□ 0.77
HLA-DQB2-231ENST00000435145 NFAT5O94916 1531 aa19.85■□□□□ 0.77
HLA-DQB2-231ENST00000435145 MED1Q15648 1581 aaPredicted RBP19.84■□□□□ 0.77
HLA-DQB2-231ENST00000435145 GNAI3P08754 354 aa19.84■□□□□ 0.77
HLA-DQB2-231ENST00000435145 TAF7Q15545 349 aaPredicted RBP19.84■□□□□ 0.77
HLA-DQB2-231ENST00000435145 CASC1Q6TDU7 716 aa19.84■□□□□ 0.77
HLA-DQB2-231ENST00000435145 GBP4Q96PP9 640 aa19.84■□□□□ 0.77
HLA-DQB2-231ENST00000435145 CHD2O14647 1828 aaKnown RBP19.83■□□□□ 0.77
HLA-DQB2-231ENST00000435145 GOLGA6L3A6NEY3 463 aa19.83■□□□□ 0.77
HLA-DQB2-231ENST00000435145 PDE1AP54750 535 aa19.83■□□□□ 0.77
HLA-DQB2-231ENST00000435145 NUTM2GQ5VZR2 741 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms