RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 MEIS3Q99687 375 aa15.12■□□□□ 0.01
CLDN4-203ENST00000435050 G2E3Q7L622 706 aa15.12■□□□□ 0.01
CLDN4-203ENST00000435050 TAF7Q15545 349 aaPredicted RBP15.11■□□□□ 0.01
CLDN4-203ENST00000435050 SBNO1A3KN83 1393 aa15.1■□□□□ 0.01
CLDN4-203ENST00000435050 GCP02774 474 aa15.1■□□□□ 0.01
CLDN4-203ENST00000435050 RILPL2Q969X0 211 aa15.1■□□□□ 0.01
CLDN4-203ENST00000435050 GCC1Q96CN9 775 aa15.1■□□□□ 0.01
CLDN4-203ENST00000435050 EXOC6BQ9Y2D4 811 aa15.1■□□□□ 0.01
CLDN4-203ENST00000435050 BTBD11A6QL63 1104 aa15.1■□□□□ 0.01
CLDN4-203ENST00000435050 ZBTB7BO15156 539 aaPredicted RBP15.1■□□□□ 0.01
CLDN4-203ENST00000435050 HDAC1Q13547 482 aaPredicted RBP15.1■□□□□ 0.01
CLDN4-203ENST00000435050 CHL1O00533 1208 aa15.09■□□□□ 0.01
CLDN4-203ENST00000435050 ANKRD24Q8TF21 1146 aa15.09■□□□□ 0.01
CLDN4-203ENST00000435050 LRRC7Q96NW7 1537 aa15.09■□□□□ 0.01
CLDN4-203ENST00000435050 DLC1Q96QB1 1528 aa15.09■□□□□ 0.01
CLDN4-203ENST00000435050 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
CLDN4-203ENST00000435050 NBPF6Q5VWK0 638 aa15.09■□□□□ 0.01
CLDN4-203ENST00000435050 NBPF4Q96M43 638 aa15.09■□□□□ 0.01
CLDN4-203ENST00000435050 IQSEC2Q5JU85 1478 aa15.08■□□□□ 0.01
CLDN4-203ENST00000435050 UBTFL1P0CB47 393 aaPredicted RBP15.08■□□□□ 0.01
CLDN4-203ENST00000435050 FLIIQ13045 1269 aa15.08■□□□□ 0
CLDN4-203ENST00000435050 C9orf78Q9NZ63 289 aaPredicted RBP15.08■□□□□ 0
CLDN4-203ENST00000435050 ARHGAP45Q92619 1136 aa15.07■□□□□ 0
CLDN4-203ENST00000435050 NFKBIBQ15653 356 aa15.07■□□□□ 0
CLDN4-203ENST00000435050 STRN4Q9NRL3 753 aa15.07■□□□□ 0
CLDN4-203ENST00000435050 CDK12Q9NYV4 1490 aaPredicted RBP15.07■□□□□ 0
CLDN4-203ENST00000435050 MED14O60244 1454 aa15.07■□□□□ 0
CLDN4-203ENST00000435050 EIF5BO60841 1220 aaKnown RBP15.07■□□□□ 0
CLDN4-203ENST00000435050 GNAI2P04899 355 aa15.07■□□□□ 0
CLDN4-203ENST00000435050 C16orf71Q8IYS4 520 aaPredicted RBP15.07■□□□□ 0
CLDN4-203ENST00000435050 LGR6Q9HBX8 967 aa15.07■□□□□ 0
CLDN4-203ENST00000435050 NOL8Q76FK4 1167 aaKnown RBP15.06■□□□□ 0
CLDN4-203ENST00000435050 CCT4P50991 539 aaKnown RBP15.06■□□□□ 0
CLDN4-203ENST00000435050 EVA1CP58658 441 aa15.06■□□□□ 0
CLDN4-203ENST00000435050 IP6K1Q92551 441 aa15.06■□□□□ 0
CLDN4-203ENST00000435050 SMC5Q8IY18 1101 aa15.05■□□□□ 0
CLDN4-203ENST00000435050 ZNF853P0CG23 659 aa15.05■□□□□ -0
CLDN4-203ENST00000435050 NUCB1Q02818 461 aa15.05■□□□□ -0
CLDN4-203ENST00000435050 TTC5Q8N0Z6 440 aa15.05■□□□□ -0
CLDN4-203ENST00000435050 MYL6BP14649 208 aa15.05■□□□□ -0
CLDN4-203ENST00000435050 TSHZ3Q63HK5 1081 aa15.05■□□□□ -0
CLDN4-203ENST00000435050 GZF1Q9H116 711 aaPredicted RBP15.05■□□□□ -0
CLDN4-203ENST00000435050 C19orf44Q9H6X5 657 aa15.05■□□□□ -0
CLDN4-203ENST00000435050 IL1RAPL2Q9NP60 686 aa15.05■□□□□ -0
CLDN4-203ENST00000435050 FRAT2O75474 233 aaPredicted RBP15.04■□□□□ -0
CLDN4-203ENST00000435050 SURF6O75683 361 aaKnown RBP15.04■□□□□ -0
CLDN4-203ENST00000435050 SETD1BQ9UPS6 1966 aaKnown RBP15.04■□□□□ -0
CLDN4-203ENST00000435050 GNAI3P08754 354 aa15.04■□□□□ -0
CLDN4-203ENST00000435050 TATP17735 454 aaPredicted RBP15.04■□□□□ -0
CLDN4-203ENST00000435050 TPRNQ4KMQ1 711 aa15.04■□□□□ -0
CLDN4-203ENST00000435050 IL17REQ8NFR9 667 aa15.04■□□□□ -0
CLDN4-203ENST00000435050 CCDC9Q9Y3X0 531 aaKnown RBP15.04■□□□□ -0
CLDN4-203ENST00000435050 PRDM11Q9NQV5 511 aa15.04■□□□□ -0
CLDN4-203ENST00000435050 CHMP3Q9Y3E7 222 aa15.04■□□□□ -0
CLDN4-203ENST00000435050 REREQ9P2R6 1566 aa15.03■□□□□ -0
CLDN4-203ENST00000435050 RPAP2Q8IXW5 612 aaPredicted RBP15.03■□□□□ -0
CLDN4-203ENST00000435050 PHAXQ9H814 394 aaKnown RBP15.03■□□□□ -0
CLDN4-203ENST00000435050 COL3A1P02461 1466 aaPredicted RBP15.03■□□□□ -0
CLDN4-203ENST00000435050 SLC39A6Q13433 755 aa15.03■□□□□ -0
CLDN4-203ENST00000435050 LRRFIP2Q9Y608 721 aaKnown RBP15.03■□□□□ -0
CLDN4-203ENST00000435050 TECPR2O15040 1411 aa15.02■□□□□ -0
CLDN4-203ENST00000435050 SRCIN1Q9C0H9 1055 aa15.02■□□□□ -0
CLDN4-203ENST00000435050 CDC45O75419 566 aa15.02□□□□□ -0.01
CLDN4-203ENST00000435050 TOM1L2Q6ZVM7 507 aa15.02□□□□□ -0.01
CLDN4-203ENST00000435050 DDX54Q8TDD1 881 aaKnown RBP15.02□□□□□ -0.01
CLDN4-203ENST00000435050 CDC42BPGQ6DT37 1551 aa15.02□□□□□ -0.01
CLDN4-203ENST00000435050 PTPRCP08575 1304 aa15.02□□□□□ -0.01
CLDN4-203ENST00000435050 KIF13AQ9H1H9 1805 aa15.01□□□□□ -0.01
CLDN4-203ENST00000435050 KCNQ3O43525 872 aa15.01□□□□□ -0.01
CLDN4-203ENST00000435050 RIC3Q7Z5B4 369 aa15.01□□□□□ -0.01
CLDN4-203ENST00000435050 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
CLDN4-203ENST00000435050 MAP3K5Q99683 1374 aa15.01□□□□□ -0.01
CLDN4-203ENST00000435050 MSH6P52701 1360 aa15.01□□□□□ -0.01
CLDN4-203ENST00000435050 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
CLDN4-203ENST00000435050 MAP4K4O95819 1239 aaPredicted RBP15□□□□□ -0.01
CLDN4-203ENST00000435050 PIP4K2AP48426 406 aaPredicted RBP15□□□□□ -0.01
CLDN4-203ENST00000435050 OTUD7AQ8TE49 926 aaPredicted RBP15□□□□□ -0.01
CLDN4-203ENST00000435050 CHMP4AQ9BY43 222 aa15□□□□□ -0.01
CLDN4-203ENST00000435050 PI4KAP2A4QPH2 592 aa15□□□□□ -0.01
CLDN4-203ENST00000435050 PI4KAP1Q8N8J0 262 aa15□□□□□ -0.01
CLDN4-203ENST00000435050 ARHGEF10O15013 1369 aa15□□□□□ -0.01
CLDN4-203ENST00000435050 MAP2P11137 1827 aaKnown RBP15□□□□□ -0.01
CLDN4-203ENST00000435050 PIK3R4Q99570 1358 aa15□□□□□ -0.01
CLDN4-203ENST00000435050 SHPRHQ149N8 1683 aa15□□□□□ -0.01
CLDN4-203ENST00000435050 SRGAP3O43295 1099 aa14.99□□□□□ -0.01
CLDN4-203ENST00000435050 TBC1D32Q96NH3 1257 aa14.99□□□□□ -0.01
CLDN4-203ENST00000435050 NPHP4O75161 1426 aaPredicted RBP14.99□□□□□ -0.01
CLDN4-203ENST00000435050 CEP85Q6P2H3 762 aa14.99□□□□□ -0.01
CLDN4-203ENST00000435050 NCLP19338 710 aaKnown RBP14.98□□□□□ -0.01
CLDN4-203ENST00000435050 ANKRD44Q8N8A2 993 aa14.98□□□□□ -0.01
CLDN4-203ENST00000435050 TBC1D2Q9BYX2 928 aa14.98□□□□□ -0.01
CLDN4-203ENST00000435050 AMOTQ4VCS5 1084 aa14.98□□□□□ -0.01
CLDN4-203ENST00000435050 CADPS2Q86UW7 1296 aa14.98□□□□□ -0.01
CLDN4-203ENST00000435050 ABCC4O15439 1325 aa14.98□□□□□ -0.01
CLDN4-203ENST00000435050 KCNJ4P48050 445 aa14.98□□□□□ -0.01
CLDN4-203ENST00000435050 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
CLDN4-203ENST00000435050 OVOS2A0A0J9YW53 1432 aa14.97□□□□□ -0.01
CLDN4-203ENST00000435050 OVOS2Q6IE36 1432 aa14.97□□□□□ -0.01
CLDN4-203ENST00000435050 USP32Q8NFA0 1604 aa14.97□□□□□ -0.01
CLDN4-203ENST00000435050 SYTL4Q96C24 671 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms