RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 AIMP1Q12904 312 aaKnown RBP19.36■□□□□ 0.69
SCARF1-203ENST00000434376 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
SCARF1-203ENST00000434376 FOXD4L6Q3SYB3 417 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-203ENST00000434376 FOXD4L3Q6VB84 417 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-203ENST00000434376 ADAMTS13Q76LX8 1427 aa19.35■□□□□ 0.69
SCARF1-203ENST00000434376 UBE2Q2Q8WVN8 375 aa19.35■□□□□ 0.69
SCARF1-203ENST00000434376 RILPL2Q969X0 211 aa19.35■□□□□ 0.69
SCARF1-203ENST00000434376 PHAXQ9H814 394 aaKnown RBP19.35■□□□□ 0.69
SCARF1-203ENST00000434376 TRIM6-TRIM34B2RNG4 842 aa19.34■□□□□ 0.69
SCARF1-203ENST00000434376 ANKLE2Q86XL3 938 aa19.34■□□□□ 0.69
SCARF1-203ENST00000434376 FAM43AQ8N2R8 423 aa19.34■□□□□ 0.69
SCARF1-203ENST00000434376 TBC1D9Q6ZT07 1266 aa19.33■□□□□ 0.69
SCARF1-203ENST00000434376 PLEKHG3A1L390 1219 aa19.33■□□□□ 0.69
SCARF1-203ENST00000434376 ZNF853P0CG23 659 aa19.33■□□□□ 0.69
SCARF1-203ENST00000434376 CCDC9Q9Y3X0 531 aaKnown RBP19.33■□□□□ 0.68
SCARF1-203ENST00000434376 HOXC9P31274 260 aa19.32■□□□□ 0.68
SCARF1-203ENST00000434376 CHL1O00533 1208 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 HDGFL1Q5TGJ6 251 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 RRAGDQ9NQL2 400 aaPredicted RBP19.31■□□□□ 0.68
SCARF1-203ENST00000434376 ATP7BP35670 1465 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 MSH6P52701 1360 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 NBPF6Q5VWK0 638 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 PROSER2Q86WR7 435 aaPredicted RBP19.31■□□□□ 0.68
SCARF1-203ENST00000434376 JARID2Q92833 1246 aaPredicted RBP19.31■□□□□ 0.68
SCARF1-203ENST00000434376 NBPF4Q96M43 638 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 TBX22Q9Y458 520 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 A0A0G2JS52 829 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 CD2BP2O95400 341 aaKnown RBP19.31■□□□□ 0.68
SCARF1-203ENST00000434376 CSB-PGBD3P0DP91 1061 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 IL17REQ8NFR9 667 aa19.31■□□□□ 0.68
SCARF1-203ENST00000434376 HSPA2P54652 639 aa19.3■□□□□ 0.68
SCARF1-203ENST00000434376 USP6P35125 1406 aa19.3■□□□□ 0.68
SCARF1-203ENST00000434376 GNAT3A8MTJ3 354 aa19.3■□□□□ 0.68
SCARF1-203ENST00000434376 TEFQ10587 303 aa19.3■□□□□ 0.68
SCARF1-203ENST00000434376 CHRNA2Q15822 529 aa19.3■□□□□ 0.68
SCARF1-203ENST00000434376 ZNF530Q6P9A1 599 aaPredicted RBP19.29■□□□□ 0.68
SCARF1-203ENST00000434376 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
SCARF1-203ENST00000434376 NLRP2Q9NX02 1062 aa19.28■□□□□ 0.68
SCARF1-203ENST00000434376 PRAMEF22A3QJZ6 481 aa19.28■□□□□ 0.68
SCARF1-203ENST00000434376 FLIIQ13045 1269 aa19.28■□□□□ 0.68
SCARF1-203ENST00000434376 GSPT1P15170 499 aaKnown RBP19.27■□□□□ 0.68
SCARF1-203ENST00000434376 OS9Q13438 667 aaPredicted RBP19.27■□□□□ 0.68
SCARF1-203ENST00000434376 GAS2L2Q8NHY3 880 aa19.27■□□□□ 0.68
SCARF1-203ENST00000434376 LRRFIP2Q9Y608 721 aaKnown RBP19.27■□□□□ 0.68
SCARF1-203ENST00000434376 SLC39A6Q13433 755 aa19.27■□□□□ 0.67
SCARF1-203ENST00000434376 NCLP19338 710 aaKnown RBP19.26■□□□□ 0.67
SCARF1-203ENST00000434376 CEP85Q6P2H3 762 aa19.26■□□□□ 0.67
SCARF1-203ENST00000434376 NUTM1Q86Y26 1132 aa19.26■□□□□ 0.67
SCARF1-203ENST00000434376 ZNF330Q9Y3S2 320 aaPredicted RBP19.26■□□□□ 0.67
SCARF1-203ENST00000434376 GOLGA6L3A6NEY3 463 aa19.26■□□□□ 0.67
SCARF1-203ENST00000434376 L1TD1Q5T7N2 865 aaKnown RBP19.26■□□□□ 0.67
SCARF1-203ENST00000434376 SPATA31D1Q6ZQQ2 1576 aa19.26■□□□□ 0.67
SCARF1-203ENST00000434376 GCC1Q96CN9 775 aa19.25■□□□□ 0.67
SCARF1-203ENST00000434376 PNMA6EA0A0J9YXQ4 647 aa19.25■□□□□ 0.67
SCARF1-203ENST00000434376 LARP6Q9BRS8 491 aaKnown RBP19.25■□□□□ 0.67
SCARF1-203ENST00000434376 CHAMP1Q96JM3 812 aa19.25■□□□□ 0.67
SCARF1-203ENST00000434376 FLT4P35916 1363 aa19.24■□□□□ 0.67
SCARF1-203ENST00000434376 PLEKHG1Q9ULL1 1385 aa19.24■□□□□ 0.67
SCARF1-203ENST00000434376 AAMPQ13685 434 aa19.24■□□□□ 0.67
SCARF1-203ENST00000434376 PLEKHM2Q8IWE5 1019 aa19.24■□□□□ 0.67
SCARF1-203ENST00000434376 ABCC4O15439 1325 aa19.24■□□□□ 0.67
SCARF1-203ENST00000434376 MYL6BP14649 208 aa19.23■□□□□ 0.67
SCARF1-203ENST00000434376 DDX54Q8TDD1 881 aaKnown RBP19.23■□□□□ 0.67
SCARF1-203ENST00000434376 CHPF2Q9P2E5 772 aa19.23■□□□□ 0.67
SCARF1-203ENST00000434376 AATKQ6ZMQ8 1374 aa19.22■□□□□ 0.67
SCARF1-203ENST00000434376 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
SCARF1-203ENST00000434376 SDSP20132 328 aa19.22■□□□□ 0.67
SCARF1-203ENST00000434376 HAP1P54257 671 aaPredicted RBP19.22■□□□□ 0.67
SCARF1-203ENST00000434376 TAF7Q15545 349 aaPredicted RBP19.21■□□□□ 0.67
SCARF1-203ENST00000434376 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
SCARF1-203ENST00000434376 PI4KAP2A4QPH2 592 aa19.21■□□□□ 0.67
SCARF1-203ENST00000434376 PI4KAP1Q8N8J0 262 aa19.21■□□□□ 0.67
SCARF1-203ENST00000434376 AGLP35573 1532 aa19.21■□□□□ 0.67
SCARF1-203ENST00000434376 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.66
SCARF1-203ENST00000434376 DLC1Q96QB1 1528 aa19.2■□□□□ 0.66
SCARF1-203ENST00000434376 CCDC30Q5VVM6 783 aa19.2■□□□□ 0.66
SCARF1-203ENST00000434376 ARHGAP45Q92619 1136 aa19.2■□□□□ 0.66
SCARF1-203ENST00000434376 VSIG10Q8N0Z9 540 aa19.2■□□□□ 0.66
SCARF1-203ENST00000434376 BTBD11A6QL63 1104 aa19.2■□□□□ 0.66
SCARF1-203ENST00000434376 CDC45O75419 566 aa19.2■□□□□ 0.66
SCARF1-203ENST00000434376 GNAI2P04899 355 aa19.19■□□□□ 0.66
SCARF1-203ENST00000434376 C1orf141Q5JVX7 400 aa19.19■□□□□ 0.66
SCARF1-203ENST00000434376 ANKRD44Q8N8A2 993 aa19.19■□□□□ 0.66
SCARF1-203ENST00000434376 GCP02774 474 aa19.19■□□□□ 0.66
SCARF1-203ENST00000434376 UBTFL1P0CB47 393 aaPredicted RBP19.19■□□□□ 0.66
SCARF1-203ENST00000434376 BMP2KLQ5H9B9 411 aa19.19■□□□□ 0.66
SCARF1-203ENST00000434376 ANO2Q9NQ90 1003 aa19.19■□□□□ 0.66
SCARF1-203ENST00000434376 XRCC6P12956 609 aaKnown RBP eCLIP19.18■□□□□ 0.66
SCARF1-203ENST00000434376 SIL1Q9H173 461 aa19.18■□□□□ 0.66
SCARF1-203ENST00000434376 AXIN2Q9Y2T1 843 aa19.18■□□□□ 0.66
SCARF1-203ENST00000434376 MED14O60244 1454 aa19.18■□□□□ 0.66
SCARF1-203ENST00000434376 ADGRB2O60241 1585 aa19.18■□□□□ 0.66
SCARF1-203ENST00000434376 DCTPP1Q9H773 170 aa19.18■□□□□ 0.66
SCARF1-203ENST00000434376 HMMRO75330 724 aa19.17■□□□□ 0.66
SCARF1-203ENST00000434376 TTC21AQ8NDW8 1320 aa19.17■□□□□ 0.66
SCARF1-203ENST00000434376 SBNO1A3KN83 1393 aa19.17■□□□□ 0.66
SCARF1-203ENST00000434376 NBPF7P0C2Y1 421 aaPredicted RBP19.17■□□□□ 0.66
SCARF1-203ENST00000434376 SIRT1Q96EB6 747 aa19.17■□□□□ 0.66
SCARF1-203ENST00000434376 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
SCARF1-203ENST00000434376 CWF19L2Q2TBE0 894 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms