RNA–Protein interactions for RNA: ENST00000434054.6

CLCN2-204, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCN2, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-204ENST00000434054 PLEKHG1Q9ULL1 1385 aa21.31■■□□□ 1
CLCN2-204ENST00000434054 RBM10P98175 930 aaKnown RBP21.3■■□□□ 1
CLCN2-204ENST00000434054 CALD1Q05682 793 aaKnown RBP21.3■■□□□ 1
CLCN2-204ENST00000434054 RRS1Q15050 365 aaKnown RBP21.3■■□□□ 1
CLCN2-204ENST00000434054 ZSCAN23Q3MJ62 389 aa21.3■■□□□ 1
CLCN2-204ENST00000434054 MED14O60244 1454 aa21.29■■□□□ 1
CLCN2-204ENST00000434054 ZBTB7CA1YPR0 619 aa21.29■■□□□ 1
CLCN2-204ENST00000434054 GNAI1P63096 354 aa21.29■■□□□ 1
CLCN2-204ENST00000434054 RBSNQ9H1K0 784 aa21.29■■□□□ 1
CLCN2-204ENST00000434054 ABCC4O15439 1325 aa21.29■■□□□ 1
CLCN2-204ENST00000434054 PNPLA6Q8IY17 1366 aa21.29■■□□□ 1
CLCN2-204ENST00000434054 MSNP26038 577 aaKnown RBP21.29■■□□□ 1
CLCN2-204ENST00000434054 PRIM1P49642 420 aaKnown RBP21.29■■□□□ 1
CLCN2-204ENST00000434054 ZSCAN30Q86W11 494 aa21.29■■□□□ 1
CLCN2-204ENST00000434054 USP26Q9BXU7 913 aa21.29■■□□□ 1
CLCN2-204ENST00000434054 LMBRD1Q9NUN5 540 aa21.28■■□□□ 1
CLCN2-204ENST00000434054 WASLO00401 505 aaPredicted RBP21.28■■□□□ 1
CLCN2-204ENST00000434054 TTC22Q5TAA0 569 aa21.28■■□□□ 1
CLCN2-204ENST00000434054 ANKLE2Q86XL3 938 aa21.28■■□□□ 1
CLCN2-204ENST00000434054 NME9Q86XW9 330 aa21.27■■□□□ 1
CLCN2-204ENST00000434054 ARHGAP45Q92619 1136 aa21.27■■□□□ 1
CLCN2-204ENST00000434054 PKNOX2Q96KN3 472 aa21.27■■□□□ 1
CLCN2-204ENST00000434054 PPP1R9BQ96SB3 815 aa21.27■■□□□ 1
CLCN2-204ENST00000434054 SDSP20132 328 aa21.26■□□□□ 0.99
CLCN2-204ENST00000434054 BRPF1P55201 1214 aaPredicted RBP21.26■□□□□ 0.99
CLCN2-204ENST00000434054 RABEP1Q15276 862 aa21.26■□□□□ 0.99
CLCN2-204ENST00000434054 FOXD4L6Q3SYB3 417 aaPredicted RBP21.26■□□□□ 0.99
CLCN2-204ENST00000434054 FAM135BQ49AJ0 1406 aa21.26■□□□□ 0.99
CLCN2-204ENST00000434054 FOXD4L3Q6VB84 417 aaPredicted RBP21.26■□□□□ 0.99
CLCN2-204ENST00000434054 NOL8Q76FK4 1167 aaKnown RBP21.26■□□□□ 0.99
CLCN2-204ENST00000434054 ARID3AQ99856 593 aa21.26■□□□□ 0.99
CLCN2-204ENST00000434054 NSFL1CQ9UNZ2 370 aaKnown RBP21.26■□□□□ 0.99
CLCN2-204ENST00000434054 IFT57Q9NWB7 429 aa21.26■□□□□ 0.99
CLCN2-204ENST00000434054 XPCQ01831 940 aaPredicted RBP21.25■□□□□ 0.99
CLCN2-204ENST00000434054 TSHZ3Q63HK5 1081 aa21.25■□□□□ 0.99
CLCN2-204ENST00000434054 KCNA6P17658 529 aa21.25■□□□□ 0.99
CLCN2-204ENST00000434054 PTMSP20962 102 aa21.25■□□□□ 0.99
CLCN2-204ENST00000434054 GPT2Q8TD30 523 aa21.25■□□□□ 0.99
CLCN2-204ENST00000434054 ZNF428Q96B54 188 aa21.25■□□□□ 0.99
CLCN2-204ENST00000434054 DCTPP1Q9H773 170 aa21.25■□□□□ 0.99
CLCN2-204ENST00000434054 NUDT16Q96DE0 195 aaKnown RBP21.24■□□□□ 0.99
CLCN2-204ENST00000434054 CHMP4BQ9H444 224 aaKnown RBP21.24■□□□□ 0.99
CLCN2-204ENST00000434054 R3HCC1Q9Y3T6 440 aaKnown RBP21.24■□□□□ 0.99
CLCN2-204ENST00000434054 PTCH1Q13635 1447 aa21.24■□□□□ 0.99
CLCN2-204ENST00000434054 PTPRUQ92729 1446 aa21.24■□□□□ 0.99
CLCN2-204ENST00000434054 CEP170BQ9Y4F5 1589 aaPredicted RBP21.24■□□□□ 0.99
CLCN2-204ENST00000434054 TPRNQ4KMQ1 711 aa21.23■□□□□ 0.99
CLCN2-204ENST00000434054 RNF214Q8ND24 703 aa21.23■□□□□ 0.99
CLCN2-204ENST00000434054 ZDHHC9Q9Y397 364 aa21.23■□□□□ 0.99
CLCN2-204ENST00000434054 ZNF853P0CG23 659 aa21.22■□□□□ 0.99
CLCN2-204ENST00000434054 CFAP44Q96MT7 982 aa21.22■□□□□ 0.99
CLCN2-204ENST00000434054 API5Q9BZZ5 524 aaKnown RBP21.22■□□□□ 0.99
CLCN2-204ENST00000434054 SETD1AO15047 1707 aaKnown RBP21.22■□□□□ 0.99
CLCN2-204ENST00000434054 IL13P35225 146 aa21.22■□□□□ 0.99
CLCN2-204ENST00000434054 NUCB2P80303 420 aa21.22■□□□□ 0.99
CLCN2-204ENST00000434054 TBX22Q9Y458 520 aa21.22■□□□□ 0.99
CLCN2-204ENST00000434054 SYCE3A1L190 88 aa21.22■□□□□ 0.99
CLCN2-204ENST00000434054 INTS3Q68E01 1043 aaKnown RBP21.22■□□□□ 0.99
CLCN2-204ENST00000434054 CLEC17AQ6ZS10 378 aa21.22■□□□□ 0.99
CLCN2-204ENST00000434054 PIK3R4Q99570 1358 aa21.22■□□□□ 0.99
CLCN2-204ENST00000434054 MEIS3Q99687 375 aa21.21■□□□□ 0.99
CLCN2-204ENST00000434054 HSPA2P54652 639 aa21.21■□□□□ 0.99
CLCN2-204ENST00000434054 MPNDQ8N594 471 aa21.21■□□□□ 0.99
CLCN2-204ENST00000434054 ADAMTSL3P82987 1691 aa21.2■□□□□ 0.98
CLCN2-204ENST00000434054 AEBP1Q8IUX7 1158 aa21.2■□□□□ 0.98
CLCN2-204ENST00000434054 ARHGAP23Q9P227 1491 aa21.2■□□□□ 0.98
CLCN2-204ENST00000434054 CYP2E1P05181 493 aaPredicted RBP21.2■□□□□ 0.98
CLCN2-204ENST00000434054 FAM13BQ9NYF5 915 aa21.2■□□□□ 0.98
CLCN2-204ENST00000434054 MIS18AQ9NYP9 233 aa21.2■□□□□ 0.98
CLCN2-204ENST00000434054 ZNF445P59923 1031 aa21.19■□□□□ 0.98
CLCN2-204ENST00000434054 MCM10Q7L590 875 aa21.19■□□□□ 0.98
CLCN2-204ENST00000434054 TMEM63CQ9P1W3 806 aa21.19■□□□□ 0.98
CLCN2-204ENST00000434054 SLIT1O75093 1534 aa21.19■□□□□ 0.98
CLCN2-204ENST00000434054 OFD1O75665 1012 aa21.19■□□□□ 0.98
CLCN2-204ENST00000434054 TPM2P07951 284 aa21.19■□□□□ 0.98
CLCN2-204ENST00000434054 CEP85Q6P2H3 762 aa21.18■□□□□ 0.98
CLCN2-204ENST00000434054 SLC4A10Q6U841 1118 aa21.18■□□□□ 0.98
CLCN2-204ENST00000434054 ST18O60284 1047 aa21.18■□□□□ 0.98
CLCN2-204ENST00000434054 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
CLCN2-204ENST00000434054 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.18■□□□□ 0.98
CLCN2-204ENST00000434054 PRR36Q9H6K5 1346 aa21.18■□□□□ 0.98
CLCN2-204ENST00000434054 SOX12O15370 315 aa21.17■□□□□ 0.98
CLCN2-204ENST00000434054 NEK4P51957 841 aa21.17■□□□□ 0.98
CLCN2-204ENST00000434054 ANKRD44Q8N8A2 993 aa21.17■□□□□ 0.98
CLCN2-204ENST00000434054 CCDC61Q9Y6R9 512 aa21.16■□□□□ 0.98
CLCN2-204ENST00000434054 DLC1Q96QB1 1528 aa21.16■□□□□ 0.98
CLCN2-204ENST00000434054 F6X3S4 739 aa21.15■□□□□ 0.98
CLCN2-204ENST00000434054 KNDC1Q76NI1 1749 aa21.15■□□□□ 0.98
CLCN2-204ENST00000434054 MSH6P52701 1360 aa21.15■□□□□ 0.98
CLCN2-204ENST00000434054 IBTKQ9P2D0 1353 aaPredicted RBP21.14■□□□□ 0.97
CLCN2-204ENST00000434054 GDPD2Q9HCC8 539 aa21.14■□□□□ 0.97
CLCN2-204ENST00000434054 CASC1Q6TDU7 716 aa21.14■□□□□ 0.97
CLCN2-204ENST00000434054 MAP2P11137 1827 aaKnown RBP21.13■□□□□ 0.97
CLCN2-204ENST00000434054 PLEKHG5O94827 1062 aa21.13■□□□□ 0.97
CLCN2-204ENST00000434054 SULT6B1Q6IMI4 303 aa21.13■□□□□ 0.97
CLCN2-204ENST00000434054 EXOC6BQ9Y2D4 811 aa21.13■□□□□ 0.97
CLCN2-204ENST00000434054 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.12■□□□□ 0.97
CLCN2-204ENST00000434054 TECPR2O15040 1411 aa21.12■□□□□ 0.97
CLCN2-204ENST00000434054 ATP10DQ9P241 1426 aa21.12■□□□□ 0.97
CLCN2-204ENST00000434054 SLC4A2P04920 1241 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms