RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
SMPD4-206ENST00000433118 SETD1BQ9UPS6 1966 aaKnown RBP13.15□□□□□ -0.3
SMPD4-206ENST00000433118 CALD1Q05682 793 aaKnown RBP13.15□□□□□ -0.3
SMPD4-206ENST00000433118 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
SMPD4-206ENST00000433118 TTC21AQ8NDW8 1320 aa13.15□□□□□ -0.3
SMPD4-206ENST00000433118 ZBTB7BO15156 539 aaPredicted RBP13.15□□□□□ -0.31
SMPD4-206ENST00000433118 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.31
SMPD4-206ENST00000433118 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.31
SMPD4-206ENST00000433118 VAMP4O75379 141 aa13.14□□□□□ -0.31
SMPD4-206ENST00000433118 BMP2KLQ5H9B9 411 aa13.14□□□□□ -0.31
SMPD4-206ENST00000433118 NPHP4O75161 1426 aaPredicted RBP13.14□□□□□ -0.31
SMPD4-206ENST00000433118 DDX17Q92841 729 aaKnown RBP13.14□□□□□ -0.31
SMPD4-206ENST00000433118 GCC1Q96CN9 775 aa13.14□□□□□ -0.31
SMPD4-206ENST00000433118 EYA1Q99502 592 aa13.14□□□□□ -0.31
SMPD4-206ENST00000433118 SSH2Q76I76 1423 aa13.14□□□□□ -0.31
SMPD4-206ENST00000433118 XRCC6P12956 609 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMPD4-206ENST00000433118 GNAI1P63096 354 aa13.13□□□□□ -0.31
SMPD4-206ENST00000433118 MRPL50Q8N5N7 158 aaKnown RBP13.13□□□□□ -0.31
SMPD4-206ENST00000433118 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
SMPD4-206ENST00000433118 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
SMPD4-206ENST00000433118 ADAMTSL3P82987 1691 aa13.13□□□□□ -0.31
SMPD4-206ENST00000433118 DDX11L8A8MPP1 907 aa13.13□□□□□ -0.31
SMPD4-206ENST00000433118 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
SMPD4-206ENST00000433118 XRN1Q8IZH2 1706 aaKnown RBP13.12□□□□□ -0.31
SMPD4-206ENST00000433118 TOPAZ1Q8N9V7 1692 aa13.12□□□□□ -0.31
SMPD4-206ENST00000433118 ARHGAP45Q92619 1136 aa13.12□□□□□ -0.31
SMPD4-206ENST00000433118 IFT57Q9NWB7 429 aa13.12□□□□□ -0.31
SMPD4-206ENST00000433118 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
SMPD4-206ENST00000433118 TWISTNBQ3B726 338 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-206ENST00000433118 SNX21Q969T3 373 aa13.11□□□□□ -0.31
SMPD4-206ENST00000433118 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
SMPD4-206ENST00000433118 MTHFSDQ2M296 383 aaKnown RBP13.11□□□□□ -0.31
SMPD4-206ENST00000433118 PANK2Q9BZ23 570 aa13.11□□□□□ -0.31
SMPD4-206ENST00000433118 USP31Q70CQ4 1352 aa13.11□□□□□ -0.31
SMPD4-206ENST00000433118 HOXC9P31274 260 aa13.1□□□□□ -0.31
SMPD4-206ENST00000433118 NCOA3Q9Y6Q9 1424 aa13.1□□□□□ -0.31
SMPD4-206ENST00000433118 FLT4P35916 1363 aa13.1□□□□□ -0.31
SMPD4-206ENST00000433118 RRAGDQ9NQL2 400 aaPredicted RBP13.1□□□□□ -0.31
SMPD4-206ENST00000433118 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
SMPD4-206ENST00000433118 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
SMPD4-206ENST00000433118 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
SMPD4-206ENST00000433118 TBC1D9Q6ZT07 1266 aa13.1□□□□□ -0.31
SMPD4-206ENST00000433118 TNPO1Q92973 898 aaKnown RBP13.09□□□□□ -0.31
SMPD4-206ENST00000433118 CFAP44Q96MT7 982 aa13.09□□□□□ -0.31
SMPD4-206ENST00000433118 ABCC4O15439 1325 aa13.09□□□□□ -0.31
SMPD4-206ENST00000433118 LMOD3Q0VAK6 560 aa13.09□□□□□ -0.31
SMPD4-206ENST00000433118 SIRT2Q8IXJ6 389 aa13.09□□□□□ -0.31
SMPD4-206ENST00000433118 SBNO1A3KN83 1393 aa13.09□□□□□ -0.31
SMPD4-206ENST00000433118 DDIT3P35638 169 aa13.08□□□□□ -0.32
SMPD4-206ENST00000433118 GBP4Q96PP9 640 aa13.08□□□□□ -0.32
SMPD4-206ENST00000433118 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
SMPD4-206ENST00000433118 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
SMPD4-206ENST00000433118 NALCNQ8IZF0 1738 aa13.07□□□□□ -0.32
SMPD4-206ENST00000433118 ZNF853P0CG23 659 aa13.07□□□□□ -0.32
SMPD4-206ENST00000433118 MRE11P49959 708 aa13.07□□□□□ -0.32
SMPD4-206ENST00000433118 LRRC59Q96AG4 307 aaKnown RBP13.07□□□□□ -0.32
SMPD4-206ENST00000433118 KIF2CQ99661 725 aa13.07□□□□□ -0.32
SMPD4-206ENST00000433118 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-206ENST00000433118 ANKARQ7Z5J8 1434 aa13.07□□□□□ -0.32
SMPD4-206ENST00000433118 CD2BP2O95400 341 aaKnown RBP13.07□□□□□ -0.32
SMPD4-206ENST00000433118 CHD2O14647 1828 aaKnown RBP13.07□□□□□ -0.32
SMPD4-206ENST00000433118 PIK3C2AO00443 1686 aa13.07□□□□□ -0.32
SMPD4-206ENST00000433118 ADGRL3Q9HAR2 1447 aa13.07□□□□□ -0.32
SMPD4-206ENST00000433118 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
SMPD4-206ENST00000433118 RBM42Q9BTD8 480 aaKnown RBP13.06□□□□□ -0.32
SMPD4-206ENST00000433118 CDC45O75419 566 aa13.06□□□□□ -0.32
SMPD4-206ENST00000433118 DLG5Q8TDM6 1919 aa13.06□□□□□ -0.32
SMPD4-206ENST00000433118 K7ELQ4 463 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-206ENST00000433118 ZC3H6P61129 1189 aaKnown RBP13.05□□□□□ -0.32
SMPD4-206ENST00000433118 RAB3GAP1Q15042 981 aa13.05□□□□□ -0.32
SMPD4-206ENST00000433118 GRPEL1Q9HAV7 217 aa13.05□□□□□ -0.32
SMPD4-206ENST00000433118 FMN2Q9NZ56 1722 aa13.04□□□□□ -0.32
SMPD4-206ENST00000433118 KRT28Q7Z3Y7 464 aa13.04□□□□□ -0.32
SMPD4-206ENST00000433118 TSPYL4Q9UJ04 414 aa13.04□□□□□ -0.32
SMPD4-206ENST00000433118 ATF3P18847 181 aa13.04□□□□□ -0.32
SMPD4-206ENST00000433118 NBPF6Q5VWK0 638 aa13.04□□□□□ -0.32
SMPD4-206ENST00000433118 NBPF4Q96M43 638 aa13.04□□□□□ -0.32
SMPD4-206ENST00000433118 CABLES1Q8TDN4 633 aa13.03□□□□□ -0.32
SMPD4-206ENST00000433118 C19orf44Q9H6X5 657 aa13.03□□□□□ -0.32
SMPD4-206ENST00000433118 IGSF1Q8N6C5 1336 aa13.03□□□□□ -0.32
SMPD4-206ENST00000433118 GCP02774 474 aa13.03□□□□□ -0.32
SMPD4-206ENST00000433118 ZNF142P52746 1687 aaPredicted RBP13.03□□□□□ -0.32
SMPD4-206ENST00000433118 TMEM94Q12767 1356 aa13.03□□□□□ -0.32
SMPD4-206ENST00000433118 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
SMPD4-206ENST00000433118 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.32
SMPD4-206ENST00000433118 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
SMPD4-206ENST00000433118 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
SMPD4-206ENST00000433118 ISY1Q9ULR0 285 aaKnown RBP13.01□□□□□ -0.33
SMPD4-206ENST00000433118 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
SMPD4-206ENST00000433118 APBB1O00213 710 aa13.01□□□□□ -0.33
SMPD4-206ENST00000433118 CHL1O00533 1208 aa13.01□□□□□ -0.33
SMPD4-206ENST00000433118 DCTPP1Q9H773 170 aa13.01□□□□□ -0.33
SMPD4-206ENST00000433118 PTMSP20962 102 aa13.01□□□□□ -0.33
SMPD4-206ENST00000433118 GOLGA6L22H0YM25 854 aa13□□□□□ -0.33
SMPD4-206ENST00000433118 SSFA2P28290 1259 aa13□□□□□ -0.33
SMPD4-206ENST00000433118 IP6K1Q92551 441 aa13□□□□□ -0.33
SMPD4-206ENST00000433118 TTC22Q5TAA0 569 aa13□□□□□ -0.33
SMPD4-206ENST00000433118 C16orf71Q8IYS4 520 aaPredicted RBP13□□□□□ -0.33
SMPD4-206ENST00000433118 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
SMPD4-206ENST00000433118 GNAT3A8MTJ3 354 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms