RNA–Protein interactions for RNA: ENST00000431311.1

LINC01343-201, Transcript of long intergenic non-protein coding RNA 1343, humanhuman

TSL 3 BASIC

Gene LINC01343, Length 2,283 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01343-201ENST00000431311 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
LINC01343-201ENST00000431311 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
LINC01343-201ENST00000431311 PUS7Q96PZ0 661 aaKnown RBP13.18□□□□□ -0.3
LINC01343-201ENST00000431311 STK26Q9P289 416 aa13.18□□□□□ -0.3
LINC01343-201ENST00000431311 PTPRMP28827 1452 aa13.18□□□□□ -0.3
LINC01343-201ENST00000431311 TRIM27P14373 513 aa13.18□□□□□ -0.3
LINC01343-201ENST00000431311 TNPO1Q92973 898 aaKnown RBP13.18□□□□□ -0.3
LINC01343-201ENST00000431311 GBP4Q96PP9 640 aa13.18□□□□□ -0.3
LINC01343-201ENST00000431311 SMC4Q9NTJ3 1288 aa13.18□□□□□ -0.3
LINC01343-201ENST00000431311 YTHDC2Q9H6S0 1430 aaKnown RBP13.17□□□□□ -0.3
LINC01343-201ENST00000431311 SKOR2Q2VWA4 1001 aaPredicted RBP13.17□□□□□ -0.3
LINC01343-201ENST00000431311 TRIM44Q96DX7 344 aaPredicted RBP13.17□□□□□ -0.3
LINC01343-201ENST00000431311 AK7Q96M32 723 aa13.17□□□□□ -0.3
LINC01343-201ENST00000431311 EVC2Q86UK5 1308 aa13.17□□□□□ -0.3
LINC01343-201ENST00000431311 NSD2O96028 1365 aa13.17□□□□□ -0.3
LINC01343-201ENST00000431311 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC01343-201ENST00000431311 RAB3GAP1Q15042 981 aa13.16□□□□□ -0.3
LINC01343-201ENST00000431311 ITPRIPQ8IWB1 547 aa13.16□□□□□ -0.3
LINC01343-201ENST00000431311 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
LINC01343-201ENST00000431311 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
LINC01343-201ENST00000431311 DPYSL4O14531 572 aa13.15□□□□□ -0.3
LINC01343-201ENST00000431311 ABCC11Q96J66 1382 aa13.15□□□□□ -0.3
LINC01343-201ENST00000431311 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.3
LINC01343-201ENST00000431311 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
LINC01343-201ENST00000431311 U2AF1L5P0DN76 240 aaPredicted RBP13.15□□□□□ -0.3
LINC01343-201ENST00000431311 U2AF1Q01081 240 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC01343-201ENST00000431311 EXOSC9Q06265 439 aaKnown RBP13.15□□□□□ -0.3
LINC01343-201ENST00000431311 GAS2L3Q86XJ1 694 aa13.15□□□□□ -0.3
LINC01343-201ENST00000431311 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
LINC01343-201ENST00000431311 ESF1Q9H501 851 aaKnown RBP13.15□□□□□ -0.3
LINC01343-201ENST00000431311 SSH1Q8WYL5 1049 aa13.14□□□□□ -0.31
LINC01343-201ENST00000431311 PRAM1Q96QH2 718 aa13.14□□□□□ -0.31
LINC01343-201ENST00000431311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC01343-201ENST00000431311 TTLL13PA6NNM8 815 aa13.14□□□□□ -0.31
LINC01343-201ENST00000431311 TPM2P07951 284 aa13.14□□□□□ -0.31
LINC01343-201ENST00000431311 NUCB1Q02818 461 aa13.14□□□□□ -0.31
LINC01343-201ENST00000431311 ZBTB40Q9NUA8 1239 aa13.13□□□□□ -0.31
LINC01343-201ENST00000431311 ANKRD26Q9UPS8 1709 aa13.13□□□□□ -0.31
LINC01343-201ENST00000431311 SETD1AO15047 1707 aaKnown RBP13.12□□□□□ -0.31
LINC01343-201ENST00000431311 ANKRD36BQ8N2N9 1353 aa13.12□□□□□ -0.31
LINC01343-201ENST00000431311 IL16Q14005 1332 aa13.12□□□□□ -0.31
LINC01343-201ENST00000431311 TMEM57Q8N5G2 664 aa13.12□□□□□ -0.31
LINC01343-201ENST00000431311 KRI1Q8N9T8 703 aaKnown RBP13.12□□□□□ -0.31
LINC01343-201ENST00000431311 NOB1Q9ULX3 412 aaKnown RBP13.12□□□□□ -0.31
LINC01343-201ENST00000431311 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
LINC01343-201ENST00000431311 DSG2Q14126 1118 aa13.11□□□□□ -0.31
LINC01343-201ENST00000431311 CCDC173Q0VFZ6 552 aa13.11□□□□□ -0.31
LINC01343-201ENST00000431311 BMP2KLQ5H9B9 411 aa13.11□□□□□ -0.31
LINC01343-201ENST00000431311 NRXN3Q9Y4C0 1643 aa13.11□□□□□ -0.31
LINC01343-201ENST00000431311 TNRQ92752 1358 aa13.11□□□□□ -0.31
LINC01343-201ENST00000431311 IBTKQ9P2D0 1353 aaPredicted RBP13.11□□□□□ -0.31
LINC01343-201ENST00000431311 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
LINC01343-201ENST00000431311 COL3A1P02461 1466 aaPredicted RBP13.1□□□□□ -0.31
LINC01343-201ENST00000431311 TIE1P35590 1138 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 TMPOP42166 694 aaKnown RBP13.1□□□□□ -0.31
LINC01343-201ENST00000431311 CHD1LQ86WJ1 897 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 PLEKHF1Q96S99 279 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 KIF2CQ99661 725 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 AK9Q5TCS8 1911 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 MED14O60244 1454 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 LNPKQ9C0E8 428 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 ZMYND15Q9H091 742 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
LINC01343-201ENST00000431311 K7ELQ4 463 aaPredicted RBP13.09□□□□□ -0.31
LINC01343-201ENST00000431311 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
LINC01343-201ENST00000431311 SRPK2P78362 688 aaKnown RBP13.09□□□□□ -0.31
LINC01343-201ENST00000431311 PDIA6Q15084 440 aa13.09□□□□□ -0.31
LINC01343-201ENST00000431311 DLC1Q96QB1 1528 aa13.08□□□□□ -0.32
LINC01343-201ENST00000431311 CLEC17AQ6ZS10 378 aa13.08□□□□□ -0.32
LINC01343-201ENST00000431311 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC01343-201ENST00000431311 A0A1W2PP64 1363 aa13.08□□□□□ -0.32
LINC01343-201ENST00000431311 METP08581 1390 aa13.08□□□□□ -0.32
LINC01343-201ENST00000431311 GOLGA6L22H0YM25 854 aa13.08□□□□□ -0.32
LINC01343-201ENST00000431311 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
LINC01343-201ENST00000431311 WAPLQ7Z5K2 1190 aa13.08□□□□□ -0.32
LINC01343-201ENST00000431311 HOMEZQ8IX15 550 aa13.08□□□□□ -0.32
LINC01343-201ENST00000431311 CD163L1Q9NR16 1453 aa13.07□□□□□ -0.32
LINC01343-201ENST00000431311 CD2BP2O95400 341 aaKnown RBP13.07□□□□□ -0.32
LINC01343-201ENST00000431311 NASPP49321 788 aaPredicted RBP13.07□□□□□ -0.32
LINC01343-201ENST00000431311 KDM4CQ9H3R0 1056 aa13.07□□□□□ -0.32
LINC01343-201ENST00000431311 BMP2KQ9NSY1 1161 aaPredicted RBP13.07□□□□□ -0.32
LINC01343-201ENST00000431311 UBR1Q8IWV7 1749 aa13.07□□□□□ -0.32
LINC01343-201ENST00000431311 ATAD2Q6PL18 1390 aa13.06□□□□□ -0.32
LINC01343-201ENST00000431311 ZSCAN30Q86W11 494 aa13.06□□□□□ -0.32
LINC01343-201ENST00000431311 CDK19Q9BWU1 502 aa13.06□□□□□ -0.32
LINC01343-201ENST00000431311 TMEM2Q9UHN6 1383 aa13.06□□□□□ -0.32
LINC01343-201ENST00000431311 TRIM66O15016 1216 aa13.06□□□□□ -0.32
LINC01343-201ENST00000431311 CEBPAP49715 358 aaPredicted RBP13.06□□□□□ -0.32
LINC01343-201ENST00000431311 KLHL40Q2TBA0 621 aa13.06□□□□□ -0.32
LINC01343-201ENST00000431311 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
LINC01343-201ENST00000431311 U2SURPO15042 1029 aaKnown RBP13.05□□□□□ -0.32
LINC01343-201ENST00000431311 SSFA2P28290 1259 aa13.05□□□□□ -0.32
LINC01343-201ENST00000431311 ANP32BQ92688 251 aaKnown RBP13.05□□□□□ -0.32
LINC01343-201ENST00000431311 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
LINC01343-201ENST00000431311 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
LINC01343-201ENST00000431311 KIAA1211Q6ZU35 1233 aa13.05□□□□□ -0.32
LINC01343-201ENST00000431311 PDCL3Q9H2J4 239 aa13.05□□□□□ -0.32
LINC01343-201ENST00000431311 SPDYE16A6NNV3 312 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms