RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 IL17REQ8NFR9 667 aa14.35□□□□□ -0.11
SMPD4-205ENST00000431183 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.35□□□□□ -0.11
SMPD4-205ENST00000431183 CDC42BPGQ6DT37 1551 aa14.34□□□□□ -0.11
SMPD4-205ENST00000431183 MYL6BP14649 208 aa14.34□□□□□ -0.11
SMPD4-205ENST00000431183 PLEKHO1Q53GL0 409 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-205ENST00000431183 TATP17735 454 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-205ENST00000431183 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
SMPD4-205ENST00000431183 STK31Q9BXU1 1019 aa14.34□□□□□ -0.11
SMPD4-205ENST00000431183 MAP2P11137 1827 aaKnown RBP14.34□□□□□ -0.11
SMPD4-205ENST00000431183 PRAMEF22A3QJZ6 481 aa14.34□□□□□ -0.11
SMPD4-205ENST00000431183 BTBD11A6QL63 1104 aa14.34□□□□□ -0.11
SMPD4-205ENST00000431183 CFAP44Q96MT7 982 aa14.33□□□□□ -0.11
SMPD4-205ENST00000431183 NFATC2IPQ8NCF5 419 aa14.33□□□□□ -0.12
SMPD4-205ENST00000431183 FAM182BQ5T319 152 aa14.33□□□□□ -0.12
SMPD4-205ENST00000431183 G2E3Q7L622 706 aa14.33□□□□□ -0.12
SMPD4-205ENST00000431183 C8orf37Q96NL8 207 aa14.32□□□□□ -0.12
SMPD4-205ENST00000431183 IGHDP01880 384 aa14.32□□□□□ -0.12
SMPD4-205ENST00000431183 JARID2Q92833 1246 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-205ENST00000431183 VAMP4O75379 141 aa14.32□□□□□ -0.12
SMPD4-205ENST00000431183 HDGFL1Q5TGJ6 251 aa14.32□□□□□ -0.12
SMPD4-205ENST00000431183 ATF7IPQ6VMQ6 1270 aa14.32□□□□□ -0.12
SMPD4-205ENST00000431183 OVOS2A0A0J9YW53 1432 aa14.31□□□□□ -0.12
SMPD4-205ENST00000431183 OVOS2Q6IE36 1432 aa14.31□□□□□ -0.12
SMPD4-205ENST00000431183 IPO8O15397 1037 aaKnown RBP14.31□□□□□ -0.12
SMPD4-205ENST00000431183 AATKQ6ZMQ8 1374 aa14.3□□□□□ -0.12
SMPD4-205ENST00000431183 PNPLA6Q8IY17 1366 aa14.3□□□□□ -0.12
SMPD4-205ENST00000431183 SETD1AO15047 1707 aaKnown RBP14.3□□□□□ -0.12
SMPD4-205ENST00000431183 IFT57Q9NWB7 429 aa14.3□□□□□ -0.12
SMPD4-205ENST00000431183 PCDHB15Q9Y5E8 787 aa14.3□□□□□ -0.12
SMPD4-205ENST00000431183 LRRC7Q96NW7 1537 aa14.29□□□□□ -0.12
SMPD4-205ENST00000431183 ACSBG1Q96GR2 724 aa14.29□□□□□ -0.12
SMPD4-205ENST00000431183 NGLY1Q96IV0 654 aa14.29□□□□□ -0.12
SMPD4-205ENST00000431183 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-205ENST00000431183 NOP58Q9Y2X3 529 aaKnown RBP14.29□□□□□ -0.12
SMPD4-205ENST00000431183 TRMT2AQ8IZ69 625 aaKnown RBP14.28□□□□□ -0.12
SMPD4-205ENST00000431183 RBM42Q9BTD8 480 aaKnown RBP14.28□□□□□ -0.12
SMPD4-205ENST00000431183 SPATA31A3Q5VYP0 1347 aa14.28□□□□□ -0.12
SMPD4-205ENST00000431183 TAF7Q15545 349 aaPredicted RBP14.28□□□□□ -0.12
SMPD4-205ENST00000431183 CCDC27Q2M243 656 aa14.28□□□□□ -0.12
SMPD4-205ENST00000431183 TTC5Q8N0Z6 440 aa14.28□□□□□ -0.12
SMPD4-205ENST00000431183 PHAXQ9H814 394 aaKnown RBP14.28□□□□□ -0.12
SMPD4-205ENST00000431183 IGSF1Q8N6C5 1336 aa14.28□□□□□ -0.12
SMPD4-205ENST00000431183 INSRP06213 1382 aa14.28□□□□□ -0.12
SMPD4-205ENST00000431183 MEX3CQ5U5Q3 659 aaKnown RBP14.27□□□□□ -0.12
SMPD4-205ENST00000431183 ERBB3P21860 1342 aa14.27□□□□□ -0.12
SMPD4-205ENST00000431183 ANKARQ7Z5J8 1434 aa14.27□□□□□ -0.12
SMPD4-205ENST00000431183 CABP4P57796 275 aa14.27□□□□□ -0.13
SMPD4-205ENST00000431183 LNPKQ9C0E8 428 aa14.27□□□□□ -0.13
SMPD4-205ENST00000431183 MST1RQ04912 1400 aa14.26□□□□□ -0.13
SMPD4-205ENST00000431183 FAM177BA6PVY3 158 aa14.25□□□□□ -0.13
SMPD4-205ENST00000431183 TOM1O60784 492 aa14.25□□□□□ -0.13
SMPD4-205ENST00000431183 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
SMPD4-205ENST00000431183 CDK12Q9NYV4 1490 aaPredicted RBP14.25□□□□□ -0.13
SMPD4-205ENST00000431183 CHPF2Q9P2E5 772 aa14.24□□□□□ -0.13
SMPD4-205ENST00000431183 KCNQ4P56696 695 aa14.24□□□□□ -0.13
SMPD4-205ENST00000431183 USP31Q70CQ4 1352 aa14.24□□□□□ -0.13
SMPD4-205ENST00000431183 ANKRD45Q5TZF3 282 aa14.24□□□□□ -0.13
SMPD4-205ENST00000431183 PHF23Q9BUL5 403 aaPredicted RBP14.23□□□□□ -0.13
SMPD4-205ENST00000431183 SPG7Q9UQ90 795 aa14.23□□□□□ -0.13
SMPD4-205ENST00000431183 COL3A1P02461 1466 aaPredicted RBP14.23□□□□□ -0.13
SMPD4-205ENST00000431183 CHL1O00533 1208 aa14.23□□□□□ -0.13
SMPD4-205ENST00000431183 USP32Q8NFA0 1604 aa14.23□□□□□ -0.13
SMPD4-205ENST00000431183 KIF16BQ96L93 1317 aa14.23□□□□□ -0.13
SMPD4-205ENST00000431183 SSH2Q76I76 1423 aa14.22□□□□□ -0.13
SMPD4-205ENST00000431183 MRPL50Q8N5N7 158 aaKnown RBP14.22□□□□□ -0.13
SMPD4-205ENST00000431183 ITSN1Q15811 1721 aa14.22□□□□□ -0.13
SMPD4-205ENST00000431183 NALCNQ8IZF0 1738 aa14.22□□□□□ -0.13
SMPD4-205ENST00000431183 GOLGB1Q14789 3259 aaKnown RBP14.22□□□□□ -0.13
SMPD4-205ENST00000431183 RNMTO43148 476 aaKnown RBP14.22□□□□□ -0.13
SMPD4-205ENST00000431183 MAP3K5Q99683 1374 aa14.22□□□□□ -0.13
SMPD4-205ENST00000431183 RNF123Q5XPI4 1314 aa14.22□□□□□ -0.13
SMPD4-205ENST00000431183 PDE3AQ14432 1141 aa14.21□□□□□ -0.13
SMPD4-205ENST00000431183 ZCRB1Q8TBF4 217 aaKnown RBP14.21□□□□□ -0.13
SMPD4-205ENST00000431183 SRCAPQ6ZRS2 3230 aa14.21□□□□□ -0.13
SMPD4-205ENST00000431183 CCDC85AQ96PX6 553 aaPredicted RBP14.21□□□□□ -0.13
SMPD4-205ENST00000431183 MEIS3Q99687 375 aa14.21□□□□□ -0.13
SMPD4-205ENST00000431183 CHMP3Q9Y3E7 222 aa14.21□□□□□ -0.13
SMPD4-205ENST00000431183 IL27Q8NEV9 243 aa14.21□□□□□ -0.14
SMPD4-205ENST00000431183 DDX19BQ9UMR2 479 aa14.21□□□□□ -0.14
SMPD4-205ENST00000431183 CYP27B1O15528 508 aa14.2□□□□□ -0.14
SMPD4-205ENST00000431183 PROSER3Q2NL68 480 aa14.2□□□□□ -0.14
SMPD4-205ENST00000431183 ERICH6BQ5W0A0 696 aa14.2□□□□□ -0.14
SMPD4-205ENST00000431183 EIF5BO60841 1220 aaKnown RBP14.2□□□□□ -0.14
SMPD4-205ENST00000431183 AKAP4Q5JQC9 854 aa14.2□□□□□ -0.14
SMPD4-205ENST00000431183 IFNL2Q8IZJ0 200 aa14.2□□□□□ -0.14
SMPD4-205ENST00000431183 RWDD1Q9H446 243 aaPredicted RBP14.2□□□□□ -0.14
SMPD4-205ENST00000431183 CCDC30Q5VVM6 783 aa14.2□□□□□ -0.14
SMPD4-205ENST00000431183 FLIIQ13045 1269 aa14.19□□□□□ -0.14
SMPD4-205ENST00000431183 FAM98CQ17RN3 349 aaKnown RBP14.19□□□□□ -0.14
SMPD4-205ENST00000431183 PI4KAP2A4QPH2 592 aa14.19□□□□□ -0.14
SMPD4-205ENST00000431183 SMARCA5O60264 1052 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-205ENST00000431183 SLC4A3P48751 1232 aa14.19□□□□□ -0.14
SMPD4-205ENST00000431183 AMOTQ4VCS5 1084 aa14.19□□□□□ -0.14
SMPD4-205ENST00000431183 PI4KAP1Q8N8J0 262 aa14.19□□□□□ -0.14
SMPD4-205ENST00000431183 PDZRN3Q9UPQ7 1066 aa14.19□□□□□ -0.14
SMPD4-205ENST00000431183 KIF20BQ96Q89 1820 aa14.19□□□□□ -0.14
SMPD4-205ENST00000431183 ATP5J2-PTCD1G3V325 749 aa14.19□□□□□ -0.14
SMPD4-205ENST00000431183 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-205ENST00000431183 ARHGEF10O15013 1369 aa14.18□□□□□ -0.14
SMPD4-205ENST00000431183 CHD2O14647 1828 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms