RNA–Protein interactions for RNA: ENST00000431020.1

LINC00309-201, long intergenic non-protein coding RNA 309, humanhuman

TSL 1 (best) BASIC

Gene LINC00309, Length 3,307 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00309-201ENST00000431020 PPP1R1BQ9UD71 204 aaPredicted RBP7.88□□□□□ -1.15
LINC00309-201ENST00000431020 APAF1O14727 1248 aa7.87□□□□□ -1.15
LINC00309-201ENST00000431020 PIP4K2AP48426 406 aaPredicted RBP7.87□□□□□ -1.15
LINC00309-201ENST00000431020 GTF3C3Q9Y5Q9 886 aa7.87□□□□□ -1.15
LINC00309-201ENST00000431020 SPATA31A1Q5TZJ5 1347 aa7.87□□□□□ -1.15
LINC00309-201ENST00000431020 FLT4P35916 1363 aa7.87□□□□□ -1.15
LINC00309-201ENST00000431020 COL16A1Q07092 1604 aaPredicted RBP7.86□□□□□ -1.15
LINC00309-201ENST00000431020 SMG6Q86US8 1419 aaKnown RBP7.86□□□□□ -1.15
LINC00309-201ENST00000431020 NINLQ9Y2I6 1382 aa7.86□□□□□ -1.15
LINC00309-201ENST00000431020 HNRNPUQ00839 825 aaKnown RBP eCLIP7.86□□□□□ -1.15
LINC00309-201ENST00000431020 VPS72Q15906 364 aa7.86□□□□□ -1.15
LINC00309-201ENST00000431020 RTF1Q92541 710 aaKnown RBP7.86□□□□□ -1.15
LINC00309-201ENST00000431020 PUS7Q96PZ0 661 aaKnown RBP7.86□□□□□ -1.15
LINC00309-201ENST00000431020 CAMTA1Q9Y6Y1 1673 aa7.86□□□□□ -1.15
LINC00309-201ENST00000431020 MAPK8IP2Q13387 824 aaPredicted RBP7.86□□□□□ -1.15
LINC00309-201ENST00000431020 BCL11BQ9C0K0 894 aaPredicted RBP7.86□□□□□ -1.15
LINC00309-201ENST00000431020 LGR6Q9HBX8 967 aa7.86□□□□□ -1.15
LINC00309-201ENST00000431020 KNDC1Q76NI1 1749 aa7.86□□□□□ -1.15
LINC00309-201ENST00000431020 MARCH10Q8NA82 808 aaPredicted RBP7.85□□□□□ -1.15
LINC00309-201ENST00000431020 BCL9LQ86UU0 1499 aa7.85□□□□□ -1.15
LINC00309-201ENST00000431020 USP19O94966 1318 aa7.85□□□□□ -1.15
LINC00309-201ENST00000431020 SPATA31A5Q5VU36 1347 aa7.85□□□□□ -1.15
LINC00309-201ENST00000431020 SPATA31A7Q8IWB4 1347 aa7.85□□□□□ -1.15
LINC00309-201ENST00000431020 NFATC2IPQ8NCF5 419 aa7.85□□□□□ -1.15
LINC00309-201ENST00000431020 PHF14O94880 888 aa7.85□□□□□ -1.15
LINC00309-201ENST00000431020 TEFQ10587 303 aa7.85□□□□□ -1.15
LINC00309-201ENST00000431020 RALBP1Q15311 655 aa7.85□□□□□ -1.15
LINC00309-201ENST00000431020 MYBBP1AQ9BQG0 1328 aaKnown RBP7.84□□□□□ -1.15
LINC00309-201ENST00000431020 RIPK4P57078 832 aa7.84□□□□□ -1.15
LINC00309-201ENST00000431020 MTHFSDQ2M296 383 aaKnown RBP7.84□□□□□ -1.15
LINC00309-201ENST00000431020 CARD10Q9BWT7 1032 aa7.84□□□□□ -1.15
LINC00309-201ENST00000431020 MED1Q15648 1581 aaPredicted RBP7.84□□□□□ -1.15
LINC00309-201ENST00000431020 CABP4P57796 275 aa7.84□□□□□ -1.15
LINC00309-201ENST00000431020 SSH2Q76I76 1423 aa7.84□□□□□ -1.15
LINC00309-201ENST00000431020 CYP27B1O15528 508 aa7.83□□□□□ -1.16
LINC00309-201ENST00000431020 IL13P35225 146 aa7.83□□□□□ -1.16
LINC00309-201ENST00000431020 PKNOX2Q96KN3 472 aa7.83□□□□□ -1.16
LINC00309-201ENST00000431020 IQSEC2Q5JU85 1478 aa7.83□□□□□ -1.16
LINC00309-201ENST00000431020 EIF2S2P20042 333 aaKnown RBP7.83□□□□□ -1.16
LINC00309-201ENST00000431020 PLEKHO1Q53GL0 409 aaPredicted RBP7.83□□□□□ -1.16
LINC00309-201ENST00000431020 SPG7Q9UQ90 795 aa7.83□□□□□ -1.16
LINC00309-201ENST00000431020 AATKQ6ZMQ8 1374 aa7.83□□□□□ -1.16
LINC00309-201ENST00000431020 ITSN1Q15811 1721 aa7.83□□□□□ -1.16
LINC00309-201ENST00000431020 ANO8Q9HCE9 1232 aaPredicted RBP7.83□□□□□ -1.16
LINC00309-201ENST00000431020 OVOS2A0A0J9YW53 1432 aa7.83□□□□□ -1.16
LINC00309-201ENST00000431020 OVOS2Q6IE36 1432 aa7.83□□□□□ -1.16
LINC00309-201ENST00000431020 PDE4CQ08493 712 aa7.82□□□□□ -1.16
LINC00309-201ENST00000431020 FAM177BA6PVY3 158 aa7.82□□□□□ -1.16
LINC00309-201ENST00000431020 EZH2Q15910 746 aaKnown RBP7.82□□□□□ -1.16
LINC00309-201ENST00000431020 TMOD3Q9NYL9 352 aa7.82□□□□□ -1.16
LINC00309-201ENST00000431020 ASAP1Q9ULH1 1129 aa7.82□□□□□ -1.16
LINC00309-201ENST00000431020 ADGRB2O60241 1585 aa7.82□□□□□ -1.16
LINC00309-201ENST00000431020 FBXO3Q9UK99 471 aa7.81□□□□□ -1.16
LINC00309-201ENST00000431020 PIK3C2AO00443 1686 aa7.81□□□□□ -1.16
LINC00309-201ENST00000431020 AHDC1Q5TGY3 1603 aaPredicted RBP7.81□□□□□ -1.16
LINC00309-201ENST00000431020 CRB1P82279 1406 aa7.81□□□□□ -1.16
LINC00309-201ENST00000431020 COL5A2P05997 1499 aaPredicted RBP7.81□□□□□ -1.16
LINC00309-201ENST00000431020 MAP2P11137 1827 aaKnown RBP7.81□□□□□ -1.16
LINC00309-201ENST00000431020 KRT24Q2M2I5 525 aa7.81□□□□□ -1.16
LINC00309-201ENST00000431020 IFNL2Q8IZJ0 200 aa7.81□□□□□ -1.16
LINC00309-201ENST00000431020 INSRP06213 1382 aa7.8□□□□□ -1.16
LINC00309-201ENST00000431020 ANXA1P04083 346 aa7.8□□□□□ -1.16
LINC00309-201ENST00000431020 CHMP4AQ9BY43 222 aa7.8□□□□□ -1.16
LINC00309-201ENST00000431020 KCNQ3O43525 872 aa7.8□□□□□ -1.16
LINC00309-201ENST00000431020 R3HDM1Q15032 1099 aaKnown RBP7.8□□□□□ -1.16
LINC00309-201ENST00000431020 TSR2Q969E8 191 aaKnown RBP7.8□□□□□ -1.16
LINC00309-201ENST00000431020 KIF1AQ12756 1690 aa7.8□□□□□ -1.16
LINC00309-201ENST00000431020 NPHP1O15259 732 aa7.8□□□□□ -1.16
LINC00309-201ENST00000431020 FAM196AQ6ZSG2 479 aa7.8□□□□□ -1.16
LINC00309-201ENST00000431020 TTC5Q8N0Z6 440 aa7.8□□□□□ -1.16
LINC00309-201ENST00000431020 BCL2L13Q9BXK5 485 aa7.8□□□□□ -1.16
LINC00309-201ENST00000431020 USP31Q70CQ4 1352 aa7.79□□□□□ -1.16
LINC00309-201ENST00000431020 NHSL1Q5SYE7 1610 aa7.79□□□□□ -1.16
LINC00309-201ENST00000431020 CANXP27824 592 aaKnown RBP7.79□□□□□ -1.16
LINC00309-201ENST00000431020 MSL1Q68DK7 614 aa7.79□□□□□ -1.16
LINC00309-201ENST00000431020 ATF5Q9Y2D1 282 aaPredicted RBP7.79□□□□□ -1.16
LINC00309-201ENST00000431020 RGPD5Q99666 1765 aa7.79□□□□□ -1.16
LINC00309-201ENST00000431020 BICDL1Q6ZP65 573 aa7.79□□□□□ -1.16
LINC00309-201ENST00000431020 BBXQ8WY36 941 aaPredicted RBP7.79□□□□□ -1.16
LINC00309-201ENST00000431020 PDGFDQ9GZP0 370 aaPredicted RBP7.79□□□□□ -1.16
LINC00309-201ENST00000431020 BAG6P46379 1132 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 AIMP1Q12904 312 aaKnown RBP7.78□□□□□ -1.16
LINC00309-201ENST00000431020 RTL5Q5HYW3 569 aaPredicted RBP7.78□□□□□ -1.16
LINC00309-201ENST00000431020 DHX37Q8IY37 1157 aaKnown RBP7.78□□□□□ -1.16
LINC00309-201ENST00000431020 PRAMEF22A3QJZ6 481 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 GNAT3A8MTJ3 354 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 ATP6V1AP38606 617 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 UPF1Q92900 1129 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC00309-201ENST00000431020 TFCP2L1Q9NZI6 479 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 CPDO75976 1380 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 RGS12O14924 1447 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 MYL6BP14649 208 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 PHKG2P15735 406 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 PIGBQ92521 554 aa7.78□□□□□ -1.16
LINC00309-201ENST00000431020 BTBD11A6QL63 1104 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 ZBTB7AO95365 584 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 CCDC24Q8N4L8 307 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 CDCA7LQ96GN5 454 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 RSPH6AQ9H0K4 717 aa7.77□□□□□ -1.17
LINC00309-201ENST00000431020 TSPYL4Q9UJ04 414 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms