RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 BTBD11A6QL63 1104 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 SLC4A8Q2Y0W8 1093 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 AMER1Q5JTC6 1135 aaPredicted RBP5.39□□□□□ -1.55
LRRK2-204ENST00000430804 SPOUT1Q5T280 376 aaKnown RBP5.39□□□□□ -1.55
LRRK2-204ENST00000430804 RILPL2Q969X0 211 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 UQCRHLA0A096LP55 91 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 PRC1O43663 620 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 ZNF804AQ7Z570 1209 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 MIER1Q8N108 512 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 ZCRB1Q8TBF4 217 aaKnown RBP5.39□□□□□ -1.55
LRRK2-204ENST00000430804 FMNL2Q96PY5 1086 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 SEC63Q9UGP8 760 aaKnown RBP5.39□□□□□ -1.55
LRRK2-204ENST00000430804 ATP6V1DQ9Y5K8 247 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 MKNK2Q9HBH9 465 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 PDZRN3Q9UPQ7 1066 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 WDR7Q9Y4E6 1490 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 RIPK4P57078 832 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 CCDC70Q6NSX1 233 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 PPP2R3CQ969Q6 453 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 SENP3-EIF4A1A0A087X0R7 540 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 ALDH1B1P30837 517 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 CLASRPQ8N2M8 674 aaKnown RBP5.39□□□□□ -1.55
LRRK2-204ENST00000430804 FBXO3Q9UK99 471 aa5.39□□□□□ -1.55
LRRK2-204ENST00000430804 ELL2O00472 640 aaPredicted RBP5.38□□□□□ -1.55
LRRK2-204ENST00000430804 TNFAIP1Q13829 316 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 ACSBG1Q96GR2 724 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 LBHD1Q9BQE6 289 aaPredicted RBP5.38□□□□□ -1.55
LRRK2-204ENST00000430804 M0QZ92 97 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 IL2RBP14784 551 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 CCDC96Q2M329 555 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 KRT27Q7Z3Y8 459 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 ZNF444Q8N0Y2 327 aaPredicted RBP5.38□□□□□ -1.55
LRRK2-204ENST00000430804 FBXO41Q8TF61 875 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 NUDT16Q96DE0 195 aaKnown RBP5.38□□□□□ -1.55
LRRK2-204ENST00000430804 LRRCC1Q9C099 1032 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 CHMP5Q9NZZ3 219 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 COG6Q9Y2V7 657 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 ANKRD18BA2A2Z9 1011 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 RGS3P49796 1198 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 RBM6P78332 1123 aaKnown RBP5.38□□□□□ -1.55
LRRK2-204ENST00000430804 ARMC9Q7Z3E5 817 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 SMCR8Q8TEV9 937 aaPredicted RBP5.38□□□□□ -1.55
LRRK2-204ENST00000430804 STK25O00506 426 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 HDGFL1Q5TGJ6 251 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 LRRC45Q96CN5 670 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 RRP12Q5JTH9 1297 aaKnown RBP5.38□□□□□ -1.55
LRRK2-204ENST00000430804 TMEM132EQ6IEE7 984 aa5.38□□□□□ -1.55
LRRK2-204ENST00000430804 NINLQ9Y2I6 1382 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 PALM3A6NDB9 673 aaPredicted RBP5.37□□□□□ -1.55
LRRK2-204ENST00000430804 ST18O60284 1047 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 METTL24Q5JXM2 366 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 C2orf69Q8N8R5 385 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 FAM83GA6ND36 823 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 PPP1R12BO60237 982 aaPredicted RBP5.37□□□□□ -1.55
LRRK2-204ENST00000430804 MYL6BP14649 208 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 TDO2P48775 406 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 CCDC173Q0VFZ6 552 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 MCTP1Q6DN14 999 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 SMARCA4P51532 1647 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 ZEB2O60315 1214 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 CNKSR1Q969H4 720 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 ABCF2Q9UG63 623 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 MAST3O60307 1309 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 PTPRKQ15262 1439 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 GRIPAP1Q4V328 841 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 UBAC1Q9BSL1 405 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 RNF216Q9NWF9 866 aaPredicted RBP5.37□□□□□ -1.55
LRRK2-204ENST00000430804 SLAIN2Q9P270 581 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 NAIPQ13075 1403 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 UHRF1BP1LA0JNW5 1464 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 IQCA1LA6NCM1 817 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 NR1I2O75469 434 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 KCNA4P22459 653 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 ECE1P42892 770 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 CCDC125Q86Z20 511 aa5.37□□□□□ -1.55
LRRK2-204ENST00000430804 GNPATO15228 680 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 PLCG2P16885 1265 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 KCNA6P17658 529 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 IFIT5Q13325 482 aaKnown RBP5.36□□□□□ -1.55
LRRK2-204ENST00000430804 HSP90AB2PQ58FF8 381 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 TCP11L2Q8N4U5 519 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 CNBD1Q8NA66 436 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 GGNBP2Q9H3C7 697 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 ARHGEF10O15013 1369 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 E9PSI1 815 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 CAPN15O75808 1086 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 PLS1Q14651 629 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 FAM98CQ17RN3 349 aaKnown RBP5.36□□□□□ -1.55
LRRK2-204ENST00000430804 NLGN1Q8N2Q7 840 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 WWC3Q9ULE0 1092 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 USP48Q86UV5 1035 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 ANKRD18AQ8IVF6 992 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 BTG4Q9NY30 223 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 PRKCSHP14314 528 aaPredicted RBP5.36□□□□□ -1.55
LRRK2-204ENST00000430804 KMT5BQ4FZB7 885 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 CCDC178Q5BJE1 867 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 HACE1Q8IYU2 909 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 SPATA32Q96LK8 384 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 SSX2IPQ9Y2D8 614 aa5.36□□□□□ -1.55
LRRK2-204ENST00000430804 HMOX1P09601 288 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms