RNA–Protein interactions for RNA: ENST00000430789.1

AFF3-209, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 3

Gene AFF3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-209ENST00000430789 IP6K1Q92551 441 aa8.48□□□□□ -1.05
AFF3-209ENST00000430789 CCNL1Q9UK58 526 aaPredicted RBP8.48□□□□□ -1.05
AFF3-209ENST00000430789 CD163L1Q9NR16 1453 aa8.48□□□□□ -1.05
AFF3-209ENST00000430789 MSL1Q68DK7 614 aa8.47□□□□□ -1.05
AFF3-209ENST00000430789 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.47□□□□□ -1.05
AFF3-209ENST00000430789 USP54Q70EL1 1684 aa8.46□□□□□ -1.05
AFF3-209ENST00000430789 ZNF526Q8TF50 670 aaPredicted RBP8.46□□□□□ -1.06
AFF3-209ENST00000430789 L3MBTL2Q969R5 705 aa8.46□□□□□ -1.06
AFF3-209ENST00000430789 LY75O60449 1722 aa8.46□□□□□ -1.06
AFF3-209ENST00000430789 APLP1P51693 650 aa8.45□□□□□ -1.06
AFF3-209ENST00000430789 AMIGO3Q86WK7 504 aa8.45□□□□□ -1.06
AFF3-209ENST00000430789 ZCRB1Q8TBF4 217 aaKnown RBP8.45□□□□□ -1.06
AFF3-209ENST00000430789 SYTL4Q96C24 671 aaPredicted RBP8.45□□□□□ -1.06
AFF3-209ENST00000430789 FLAD1Q8NFF5 587 aa8.44□□□□□ -1.06
AFF3-209ENST00000430789 SLC12A5Q9H2X9 1139 aa8.44□□□□□ -1.06
AFF3-209ENST00000430789 MON2Q7Z3U7 1717 aa8.43□□□□□ -1.06
AFF3-209ENST00000430789 KAT6BQ8WYB5 2073 aa8.43□□□□□ -1.06
AFF3-209ENST00000430789 IGSF1Q8N6C5 1336 aa8.43□□□□□ -1.06
AFF3-209ENST00000430789 USP47Q96K76 1375 aa8.43□□□□□ -1.06
AFF3-209ENST00000430789 MEGF6O75095 1541 aa8.43□□□□□ -1.06
AFF3-209ENST00000430789 TOMM70O94826 608 aa8.42□□□□□ -1.06
AFF3-209ENST00000430789 FBLN1P23142 703 aa8.42□□□□□ -1.06
AFF3-209ENST00000430789 HOXC9P31274 260 aa8.42□□□□□ -1.06
AFF3-209ENST00000430789 SMIM5Q71RC9 77 aa8.42□□□□□ -1.06
AFF3-209ENST00000430789 LTV1Q96GA3 475 aaPredicted RBP8.42□□□□□ -1.06
AFF3-209ENST00000430789 MAP3K19Q56UN5 1328 aa8.42□□□□□ -1.06
AFF3-209ENST00000430789 EDC4Q6P2E9 1401 aaKnown RBP8.42□□□□□ -1.06
AFF3-209ENST00000430789 LTN1O94822 1766 aa8.41□□□□□ -1.06
AFF3-209ENST00000430789 FAM208AQ9UK61 1670 aaKnown RBP8.41□□□□□ -1.06
AFF3-209ENST00000430789 COL13A1Q5TAT6 717 aaPredicted RBP8.41□□□□□ -1.06
AFF3-209ENST00000430789 NBPF6Q5VWK0 638 aa8.41□□□□□ -1.06
AFF3-209ENST00000430789 JMYQ8N9B5 988 aa8.41□□□□□ -1.06
AFF3-209ENST00000430789 NBPF4Q96M43 638 aa8.41□□□□□ -1.06
AFF3-209ENST00000430789 DOT1LQ8TEK3 1739 aa8.4□□□□□ -1.06
AFF3-209ENST00000430789 ROCK2O75116 1388 aaKnown RBP8.4□□□□□ -1.06
AFF3-209ENST00000430789 CGNL1Q0VF96 1302 aa8.4□□□□□ -1.06
AFF3-209ENST00000430789 HMGB2P26583 209 aaKnown RBP8.4□□□□□ -1.06
AFF3-209ENST00000430789 HDGFL2Q7Z4V5 671 aaPredicted RBP8.4□□□□□ -1.06
AFF3-209ENST00000430789 PUS7Q96PZ0 661 aaKnown RBP8.4□□□□□ -1.06
AFF3-209ENST00000430789 WWC3Q9ULE0 1092 aa8.4□□□□□ -1.06
AFF3-209ENST00000430789 CICQ96RK0 1608 aaPredicted RBP8.4□□□□□ -1.07
AFF3-209ENST00000430789 A0A1W2PP64 1363 aa8.39□□□□□ -1.07
AFF3-209ENST00000430789 PALLDQ8WX93 1383 aa8.39□□□□□ -1.07
AFF3-209ENST00000430789 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
AFF3-209ENST00000430789 CYP27B1O15528 508 aa8.39□□□□□ -1.07
AFF3-209ENST00000430789 TMC1Q8TDI8 760 aa8.39□□□□□ -1.07
AFF3-209ENST00000430789 TOGARAM1Q9Y4F4 1720 aa8.38□□□□□ -1.07
AFF3-209ENST00000430789 SSFA2P28290 1259 aa8.38□□□□□ -1.07
AFF3-209ENST00000430789 MPRIPQ6WCQ1 1025 aa8.38□□□□□ -1.07
AFF3-209ENST00000430789 KLRG1Q96E93 195 aa8.38□□□□□ -1.07
AFF3-209ENST00000430789 SIN3AQ96ST3 1273 aa8.38□□□□□ -1.07
AFF3-209ENST00000430789 NMRK2Q9NPI5 230 aa8.38□□□□□ -1.07
AFF3-209ENST00000430789 TERF2IPQ9NYB0 399 aa8.38□□□□□ -1.07
AFF3-209ENST00000430789 C5P01031 1676 aa8.37□□□□□ -1.07
AFF3-209ENST00000430789 AMPHP49418 695 aa8.37□□□□□ -1.07
AFF3-209ENST00000430789 TGFB2P61812 414 aa8.37□□□□□ -1.07
AFF3-209ENST00000430789 HTRA3P83110 453 aa8.37□□□□□ -1.07
AFF3-209ENST00000430789 NKX1-1Q15270 411 aaPredicted RBP8.37□□□□□ -1.07
AFF3-209ENST00000430789 USHBP1Q8N6Y0 703 aa8.37□□□□□ -1.07
AFF3-209ENST00000430789 LINC00116Q8NCU8 138 aa8.37□□□□□ -1.07
AFF3-209ENST00000430789 RBM46Q8TBY0 533 aaKnown RBP8.37□□□□□ -1.07
AFF3-209ENST00000430789 PIGBQ92521 554 aa8.37□□□□□ -1.07
AFF3-209ENST00000430789 SMARCC1Q92922 1105 aaPredicted RBP8.37□□□□□ -1.07
AFF3-209ENST00000430789 AK7Q96M32 723 aa8.37□□□□□ -1.07
AFF3-209ENST00000430789 PHF14O94880 888 aa8.36□□□□□ -1.07
AFF3-209ENST00000430789 PRELPP51888 382 aa8.36□□□□□ -1.07
AFF3-209ENST00000430789 ITPK1Q13572 414 aa8.36□□□□□ -1.07
AFF3-209ENST00000430789 RAPGEF4Q8WZA2 1011 aa8.36□□□□□ -1.07
AFF3-209ENST00000430789 COG3Q96JB2 828 aa8.36□□□□□ -1.07
AFF3-209ENST00000430789 C4BP0C0L5 1744 aa8.36□□□□□ -1.07
AFF3-209ENST00000430789 PXDNLA1KZ92 1463 aa8.36□□□□□ -1.07
AFF3-209ENST00000430789 NSD3Q9BZ95 1437 aa8.36□□□□□ -1.07
AFF3-209ENST00000430789 TAF1LQ8IZX4 1826 aa8.36□□□□□ -1.07
AFF3-209ENST00000430789 RTL1A6NKG5 1358 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 PCDH11XQ9BZA7 1347 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 PCDH11YQ9BZA8 1340 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 LOC102724428A0A0B4J2F2 783 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 A0A0G2JLW4 131 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 MMP10P09238 476 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 TATP17735 454 aaPredicted RBP8.35□□□□□ -1.07
AFF3-209ENST00000430789 KCNA3P22001 575 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 SIK1P57059 783 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 FSTL1Q12841 308 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 RRS1Q15050 365 aaKnown RBP8.35□□□□□ -1.07
AFF3-209ENST00000430789 RGPD2P0DJD1 1756 aa8.35□□□□□ -1.07
AFF3-209ENST00000430789 UBR3Q6ZT12 1888 aa8.34□□□□□ -1.07
AFF3-209ENST00000430789 FYB1O15117 783 aa8.34□□□□□ -1.07
AFF3-209ENST00000430789 HSP90AB2PQ58FF8 381 aa8.34□□□□□ -1.07
AFF3-209ENST00000430789 TESK2Q96S53 571 aa8.34□□□□□ -1.07
AFF3-209ENST00000430789 BCS1LQ9Y276 419 aa8.34□□□□□ -1.07
AFF3-209ENST00000430789 KIAA1551Q9HCM1 1747 aa8.34□□□□□ -1.07
AFF3-209ENST00000430789 INSRP06213 1382 aa8.34□□□□□ -1.07
AFF3-209ENST00000430789 MAP2P11137 1827 aaKnown RBP8.33□□□□□ -1.08
AFF3-209ENST00000430789 DPEP1P16444 411 aa8.33□□□□□ -1.08
AFF3-209ENST00000430789 C9orf131Q5VYM1 1079 aa8.33□□□□□ -1.08
AFF3-209ENST00000430789 ARHGAP27Q6ZUM4 889 aa8.33□□□□□ -1.08
AFF3-209ENST00000430789 C10orf71Q711Q0 1435 aa8.33□□□□□ -1.08
AFF3-209ENST00000430789 CARD11Q9BXL7 1154 aa8.33□□□□□ -1.08
AFF3-209ENST00000430789 ASAP1Q9ULH1 1129 aa8.33□□□□□ -1.08
AFF3-209ENST00000430789 NCAPD2Q15021 1401 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms