RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 MSH5O43196 834 aa14.54□□□□□ -0.08
ATG4B-212ENST00000430617 TOMM70O94826 608 aa14.54□□□□□ -0.08
ATG4B-212ENST00000430617 JMYQ8N9B5 988 aa14.54□□□□□ -0.08
ATG4B-212ENST00000430617 UBR3Q6ZT12 1888 aa14.54□□□□□ -0.08
ATG4B-212ENST00000430617 SLC34A2O95436 690 aa14.53□□□□□ -0.08
ATG4B-212ENST00000430617 IL2RBP14784 551 aa14.53□□□□□ -0.08
ATG4B-212ENST00000430617 KLRG1Q96E93 195 aa14.53□□□□□ -0.08
ATG4B-212ENST00000430617 NSD2O96028 1365 aa14.52□□□□□ -0.08
ATG4B-212ENST00000430617 KIF13BQ9NQT8 1826 aa14.52□□□□□ -0.09
ATG4B-212ENST00000430617 BRCA1P38398 1863 aaKnown RBP14.51□□□□□ -0.09
ATG4B-212ENST00000430617 CLSPNQ9HAW4 1339 aa14.51□□□□□ -0.09
ATG4B-212ENST00000430617 KCNH5Q8NCM2 988 aa14.51□□□□□ -0.09
ATG4B-212ENST00000430617 CCER1Q8TC90 406 aaPredicted RBP14.51□□□□□ -0.09
ATG4B-212ENST00000430617 NLRP2Q9NX02 1062 aa14.51□□□□□ -0.09
ATG4B-212ENST00000430617 MON2Q7Z3U7 1717 aa14.51□□□□□ -0.09
ATG4B-212ENST00000430617 PKD1L3Q7Z443 1732 aa14.5□□□□□ -0.09
ATG4B-212ENST00000430617 ERBB3P21860 1342 aa14.5□□□□□ -0.09
ATG4B-212ENST00000430617 IGSF1Q8N6C5 1336 aa14.5□□□□□ -0.09
ATG4B-212ENST00000430617 FAM208AQ9UK61 1670 aaKnown RBP14.49□□□□□ -0.09
ATG4B-212ENST00000430617 TTC21BQ7Z4L5 1316 aa14.49□□□□□ -0.09
ATG4B-212ENST00000430617 NMRK2Q9NPI5 230 aa14.49□□□□□ -0.09
ATG4B-212ENST00000430617 PRIM1P49642 420 aaKnown RBP14.48□□□□□ -0.09
ATG4B-212ENST00000430617 DDX54Q8TDD1 881 aaKnown RBP14.48□□□□□ -0.09
ATG4B-212ENST00000430617 SYTL4Q96C24 671 aaPredicted RBP14.48□□□□□ -0.09
ATG4B-212ENST00000430617 CCNL1Q9UK58 526 aaPredicted RBP14.48□□□□□ -0.09
ATG4B-212ENST00000430617 ITGB4P16144 1822 aa14.48□□□□□ -0.09
ATG4B-212ENST00000430617 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
ATG4B-212ENST00000430617 SBF1O95248 1867 aa14.47□□□□□ -0.09
ATG4B-212ENST00000430617 C4BP0C0L5 1744 aa14.46□□□□□ -0.09
ATG4B-212ENST00000430617 NBPF1Q3BBV0 1214 aa14.46□□□□□ -0.09
ATG4B-212ENST00000430617 ARFGEF1Q9Y6D6 1849 aa14.45□□□□□ -0.1
ATG4B-212ENST00000430617 STAC3Q96MF2 364 aa14.45□□□□□ -0.1
ATG4B-212ENST00000430617 CENPJQ9HC77 1338 aaPredicted RBP14.44□□□□□ -0.1
ATG4B-212ENST00000430617 ANKRD24Q8TF21 1146 aa14.44□□□□□ -0.1
ATG4B-212ENST00000430617 TNRC6CQ9HCJ0 1690 aaKnown RBP14.43□□□□□ -0.1
ATG4B-212ENST00000430617 AMIGO3Q86WK7 504 aa14.43□□□□□ -0.1
ATG4B-212ENST00000430617 RBM46Q8TBY0 533 aaKnown RBP14.43□□□□□ -0.1
ATG4B-212ENST00000430617 TTC21AQ8NDW8 1320 aa14.42□□□□□ -0.1
ATG4B-212ENST00000430617 SMIM5Q71RC9 77 aa14.42□□□□□ -0.1
ATG4B-212ENST00000430617 MAP2P11137 1827 aaKnown RBP14.41□□□□□ -0.1
ATG4B-212ENST00000430617 CCDC88AQ3V6T2 1871 aa14.4□□□□□ -0.1
ATG4B-212ENST00000430617 USP47Q96K76 1375 aa14.39□□□□□ -0.11
ATG4B-212ENST00000430617 HSPA1AP0DMV8 641 aaKnown RBP14.39□□□□□ -0.11
ATG4B-212ENST00000430617 HSPA1BP0DMV9 641 aaKnown RBP14.39□□□□□ -0.11
ATG4B-212ENST00000430617 ZNF692Q9BU19 519 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-212ENST00000430617 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
ATG4B-212ENST00000430617 KCPQ6ZWJ8 1503 aa14.38□□□□□ -0.11
ATG4B-212ENST00000430617 FSTL1Q12841 308 aa14.38□□□□□ -0.11
ATG4B-212ENST00000430617 KTN1Q86UP2 1357 aaKnown RBP14.37□□□□□ -0.11
ATG4B-212ENST00000430617 ZEB1P37275 1124 aaPredicted RBP14.37□□□□□ -0.11
ATG4B-212ENST00000430617 FLAD1Q8NFF5 587 aa14.37□□□□□ -0.11
ATG4B-212ENST00000430617 MEGF6O75095 1541 aa14.36□□□□□ -0.11
ATG4B-212ENST00000430617 USP31Q70CQ4 1352 aa14.36□□□□□ -0.11
ATG4B-212ENST00000430617 NME9Q86XW9 330 aa14.35□□□□□ -0.11
ATG4B-212ENST00000430617 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.35□□□□□ -0.111e-8■□□□□ 9.2
ATG4B-212ENST00000430617 C16orf71Q8IYS4 520 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-212ENST00000430617 PHF14O94880 888 aa14.34□□□□□ -0.11
ATG4B-212ENST00000430617 ARHGAP27Q6ZUM4 889 aa14.34□□□□□ -0.11
ATG4B-212ENST00000430617 LTV1Q96GA3 475 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-212ENST00000430617 BCS1LQ9Y276 419 aa14.34□□□□□ -0.11
ATG4B-212ENST00000430617 EVC2Q86UK5 1308 aa14.34□□□□□ -0.11
ATG4B-212ENST00000430617 ZCRB1Q8TBF4 217 aaKnown RBP14.33□□□□□ -0.12
ATG4B-212ENST00000430617 PALLDQ8WX93 1383 aa14.33□□□□□ -0.12
ATG4B-212ENST00000430617 CD163L1Q9NR16 1453 aa14.32□□□□□ -0.12
ATG4B-212ENST00000430617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.32□□□□□ -0.12
ATG4B-212ENST00000430617 A0A0G2JLW4 131 aa14.32□□□□□ -0.12
ATG4B-212ENST00000430617 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
ATG4B-212ENST00000430617 RRAGCQ9HB90 399 aa14.32□□□□□ -0.12
ATG4B-212ENST00000430617 C10orf71Q711Q0 1435 aa14.32□□□□□ -0.12
ATG4B-212ENST00000430617 SBNO2Q9Y2G9 1366 aa14.31□□□□□ -0.12
ATG4B-212ENST00000430617 C4AP0C0L4 1744 aa14.3□□□□□ -0.12
ATG4B-212ENST00000430617 AK7Q96M32 723 aa14.3□□□□□ -0.12
ATG4B-212ENST00000430617 SIN3AQ96ST3 1273 aa14.3□□□□□ -0.12
ATG4B-212ENST00000430617 IP6K1Q92551 441 aa14.29□□□□□ -0.12
ATG4B-212ENST00000430617 PLEKHG2Q9H7P9 1386 aa14.29□□□□□ -0.12
ATG4B-212ENST00000430617 SMC1BQ8NDV3 1235 aa14.28□□□□□ -0.12
ATG4B-212ENST00000430617 PCDH10Q9P2E7 1040 aa14.28□□□□□ -0.12
ATG4B-212ENST00000430617 TIAM2Q8IVF5 1701 aa14.27□□□□□ -0.12
ATG4B-212ENST00000430617 KDM2BQ8NHM5 1336 aa14.27□□□□□ -0.12
ATG4B-212ENST00000430617 MMP10P09238 476 aa14.27□□□□□ -0.13
ATG4B-212ENST00000430617 DPEP1P16444 411 aa14.27□□□□□ -0.13
ATG4B-212ENST00000430617 TGFB2P61812 414 aa14.27□□□□□ -0.13
ATG4B-212ENST00000430617 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.13
ATG4B-212ENST00000430617 FCHSD2O94868 740 aa14.26□□□□□ -0.13
ATG4B-212ENST00000430617 SSFA2P28290 1259 aa14.26□□□□□ -0.13
ATG4B-212ENST00000430617 VIRMAQ69YN4 1812 aaKnown RBP14.26□□□□□ -0.13
ATG4B-212ENST00000430617 NSD3Q9BZ95 1437 aa14.25□□□□□ -0.13
ATG4B-212ENST00000430617 LINC00116Q8NCU8 138 aa14.25□□□□□ -0.13
ATG4B-212ENST00000430617 COL5A3P25940 1745 aaPredicted RBP14.24□□□□□ -0.13
ATG4B-212ENST00000430617 TONSLQ96HA7 1378 aa14.24□□□□□ -0.13
ATG4B-212ENST00000430617 MYH14Q7Z406 1995 aaKnown RBP14.24□□□□□ -0.13
ATG4B-212ENST00000430617 KCNA3P22001 575 aa14.24□□□□□ -0.13
ATG4B-212ENST00000430617 FBLN1P23142 703 aa14.24□□□□□ -0.13
ATG4B-212ENST00000430617 TIMELESSQ9UNS1 1208 aa14.24□□□□□ -0.13
ATG4B-212ENST00000430617 FAM161AQ3B820 660 aa14.23□□□□□ -0.13
ATG4B-212ENST00000430617 USHBP1Q8N6Y0 703 aa14.23□□□□□ -0.13
ATG4B-212ENST00000430617 RNF181Q9P0P0 153 aa14.23□□□□□ -0.13
ATG4B-212ENST00000430617 DICER1Q9UPY3 1922 aaKnown RBP14.22□□□□□ -0.13
ATG4B-212ENST00000430617 HOXC9P31274 260 aa14.22□□□□□ -0.13
ATG4B-212ENST00000430617 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms