RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SLFNL1Q499Z3 407 aa8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 NUTM2DQ5VT03 806 aaPredicted RBP8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 CEP112Q8N8E3 955 aa8.86□□□□□ -0.99
SYNPO2-202ENST00000429713 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 GON4LQ3T8J9 2241 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 ARHGAP25P42331 645 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 K7ELQ4 463 aaPredicted RBP8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 MAP2K2P36507 400 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 RNF168Q8IYW5 571 aaPredicted RBP8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 CCDC141Q6ZP82 1450 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 CTAGE5O15320 804 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 MNAT1P51948 309 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 H3BQV1 296 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 APLFQ8IW19 511 aaPredicted RBP8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 WDR66Q8TBY9 1149 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 ELL2O00472 640 aaPredicted RBP8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 CCDC83Q8IWF9 413 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 PPP1R9BQ96SB3 815 aa8.85□□□□□ -0.99
SYNPO2-202ENST00000429713 CCDC183Q5T5S1 534 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 LRCH2Q5VUJ6 765 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 ANKRD18AQ8IVF6 992 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 RNF214Q8ND24 703 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 RSRC1Q96IZ7 334 aaKnown RBP8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 NCAPGQ9BPX3 1015 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 MYO1BO43795 1136 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 A0A0G2JS52 829 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 GPRASP1Q5JY77 1395 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 GBP6Q6ZN66 633 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 ARFGAP3Q9NP61 516 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 LUC7LQ9NQ29 371 aaKnown RBP8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 TROQ12816 1431 aaPredicted RBP8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 RUFY2Q8WXA3 655 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
SYNPO2-202ENST00000429713 ZNF445P59923 1031 aa8.83□□□□□ -1
SYNPO2-202ENST00000429713 TBC1D32Q96NH3 1257 aa8.83□□□□□ -1
SYNPO2-202ENST00000429713 PDZRN3Q9UPQ7 1066 aa8.83□□□□□ -1
SYNPO2-202ENST00000429713 TPD52L1Q16890 204 aaPredicted RBP8.83□□□□□ -1
SYNPO2-202ENST00000429713 PTPRGP23470 1445 aa8.83□□□□□ -1
SYNPO2-202ENST00000429713 PDCD2Q16342 344 aaPredicted RBP8.83□□□□□ -1
SYNPO2-202ENST00000429713 SMC2O95347 1197 aa8.83□□□□□ -1
SYNPO2-202ENST00000429713 DIAPH1O60610 1272 aaKnown RBP8.83□□□□□ -1
SYNPO2-202ENST00000429713 LRPPRCP42704 1394 aaKnown RBP8.83□□□□□ -1
SYNPO2-202ENST00000429713 LMOD2Q6P5Q4 547 aa8.83□□□□□ -1
SYNPO2-202ENST00000429713 EHBP1Q8NDI1 1231 aa8.83□□□□□ -1
SYNPO2-202ENST00000429713 PIBF1Q8WXW3 757 aa8.83□□□□□ -1
SYNPO2-202ENST00000429713 SPC24Q8NBT2 197 aa8.83□□□□□ -1
SYNPO2-202ENST00000429713 ZKSCAN8Q15776 578 aaPredicted RBP8.83□□□□□ -1
SYNPO2-202ENST00000429713 PTPN14Q15678 1187 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 ZNF592Q92610 1267 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 CCDC30Q5VVM6 783 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 CCDC73Q6ZRK6 1079 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 NUCKS1Q9H1E3 243 aaKnown RBP8.82□□□□□ -1
SYNPO2-202ENST00000429713 GOLIM4O00461 696 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 AP1ARQ63HQ0 302 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 RALGAPBQ86X10 1494 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 ZNF853P0CG23 659 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 GCC1Q96CN9 775 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 LUC7L3O95232 432 aaKnown RBP8.82□□□□□ -1
SYNPO2-202ENST00000429713 CCDC172P0C7W6 258 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 MTHFSP49914 203 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 ICE2Q659A1 982 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 CCDC150Q8NCX0 1101 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 SMC5Q8IY18 1101 aa8.82□□□□□ -1
SYNPO2-202ENST00000429713 BSDC1Q9NW68 430 aaPredicted RBP8.81□□□□□ -1
SYNPO2-202ENST00000429713 LRRIQ1Q96JM4 1722 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 GBP7Q8N8V2 638 aaPredicted RBP8.81□□□□□ -1
SYNPO2-202ENST00000429713 TRIM5Q9C035 493 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 NBPF6Q5VWK0 638 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 NBPF5PQ86XG9 351 aaPredicted RBP8.81□□□□□ -1
SYNPO2-202ENST00000429713 NBPF4Q96M43 638 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 NBPF20Q3BBV1 942 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 SPATA24Q86W54 205 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 CEP57L1Q8IYX8 460 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 DTNBP1Q96EV8 351 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 SPATS2LQ9NUQ6 558 aaKnown RBP8.81□□□□□ -1
SYNPO2-202ENST00000429713 NOB1Q9ULX3 412 aaKnown RBP8.81□□□□□ -1
SYNPO2-202ENST00000429713 MVPQ14764 893 aaKnown RBP8.81□□□□□ -1
SYNPO2-202ENST00000429713 SEPT14Q6ZU15 432 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 RMDN2Q96LZ7 410 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 LRRFIP1Q32MZ4 808 aaKnown RBP8.81□□□□□ -1
SYNPO2-202ENST00000429713 TCP11L2Q8N4U5 519 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 ERO1AQ96HE7 468 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 ARHGEF11O15085 1522 aa8.81□□□□□ -1
SYNPO2-202ENST00000429713 ASXL1Q8IXJ9 1541 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 EBAG9O00559 213 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 GOLGA5Q8TBA6 731 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 SCAND2PQ9GZW5 306 aaPredicted RBP8.8□□□□□ -1
SYNPO2-202ENST00000429713 BUB1BO60566 1050 aaPredicted RBP8.8□□□□□ -1
SYNPO2-202ENST00000429713 SFPQP23246 707 aaKnown RBP eCLIP8.8□□□□□ -1
SYNPO2-202ENST00000429713 API5Q9BZZ5 524 aaKnown RBP8.8□□□□□ -1
SYNPO2-202ENST00000429713 FYB1O15117 783 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 WDR63Q8IWG1 891 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 ABCC5O15440 1437 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 PRG4Q92954 1404 aaPredicted RBP8.8□□□□□ -1
SYNPO2-202ENST00000429713 COG3Q96JB2 828 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 USH1CQ9Y6N9 552 aa8.8□□□□□ -1
SYNPO2-202ENST00000429713 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.8□□□□□ -1
SYNPO2-202ENST00000429713 CASQ1P31415 396 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 453.2 ms