RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MORC1Q86VD1 984 aa11.19□□□□□ -0.62
GABPB1-205ENST00000429662 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
GABPB1-205ENST00000429662 BMP2KQ9NSY1 1161 aaPredicted RBP11.19□□□□□ -0.62
GABPB1-205ENST00000429662 CHD4Q14839 1912 aa11.19□□□□□ -0.62
GABPB1-205ENST00000429662 SPATA31A3Q5VYP0 1347 aa11.19□□□□□ -0.62
GABPB1-205ENST00000429662 MAPK8IP3Q9UPT6 1336 aa11.19□□□□□ -0.62
GABPB1-205ENST00000429662 PPLO60437 1756 aa11.18□□□□□ -0.62
GABPB1-205ENST00000429662 TRPM3Q9HCF6 1732 aaPredicted RBP11.18□□□□□ -0.62
GABPB1-205ENST00000429662 FOXO3O43524 673 aa11.17□□□□□ -0.62
GABPB1-205ENST00000429662 NEFMP07197 916 aa11.17□□□□□ -0.62
GABPB1-205ENST00000429662 CT47B1P0C2W7 299 aaPredicted RBP11.17□□□□□ -0.62
GABPB1-205ENST00000429662 EZH2Q15910 746 aaKnown RBP11.17□□□□□ -0.62
GABPB1-205ENST00000429662 FAM182BQ5T319 152 aa11.17□□□□□ -0.62
GABPB1-205ENST00000429662 WWC1Q8IX03 1113 aa11.17□□□□□ -0.62
GABPB1-205ENST00000429662 CCDC146Q8IYE0 955 aa11.17□□□□□ -0.62
GABPB1-205ENST00000429662 ZNF784Q8NCA9 323 aaPredicted RBP11.17□□□□□ -0.62
GABPB1-205ENST00000429662 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
GABPB1-205ENST00000429662 NSD3Q9BZ95 1437 aa11.17□□□□□ -0.62
GABPB1-205ENST00000429662 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
GABPB1-205ENST00000429662 PLCD3Q8N3E9 789 aa11.16□□□□□ -0.62
GABPB1-205ENST00000429662 PMFBP1Q8TBY8 1022 aa11.16□□□□□ -0.62
GABPB1-205ENST00000429662 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
GABPB1-205ENST00000429662 NRKQ7Z2Y5 1582 aa11.16□□□□□ -0.62
GABPB1-205ENST00000429662 ALS2Q96Q42 1657 aa11.16□□□□□ -0.62
GABPB1-205ENST00000429662 POTEFA5A3E0 1075 aa11.16□□□□□ -0.62
GABPB1-205ENST00000429662 C8orf34Q49A92 452 aa11.16□□□□□ -0.62
GABPB1-205ENST00000429662 ADGRB1O14514 1584 aa11.15□□□□□ -0.62
GABPB1-205ENST00000429662 TNS3Q68CZ2 1445 aa11.15□□□□□ -0.62
GABPB1-205ENST00000429662 COL14A1Q05707 1796 aaKnown RBP11.15□□□□□ -0.62
GABPB1-205ENST00000429662 CANXP27824 592 aaKnown RBP11.15□□□□□ -0.63
GABPB1-205ENST00000429662 CLUAP1Q96AJ1 413 aa11.15□□□□□ -0.63
GABPB1-205ENST00000429662 MYH16Q9H6N6 1097 aa11.15□□□□□ -0.63
GABPB1-205ENST00000429662 TECPR2O15040 1411 aa11.14□□□□□ -0.63
GABPB1-205ENST00000429662 RGPD3A6NKT7 1758 aaPredicted RBP11.14□□□□□ -0.63
GABPB1-205ENST00000429662 RGPD4Q7Z3J3 1758 aa11.14□□□□□ -0.63
GABPB1-205ENST00000429662 ESCO1Q5FWF5 840 aa11.14□□□□□ -0.63
GABPB1-205ENST00000429662 ANKRD36BQ8N2N9 1353 aa11.13□□□□□ -0.63
GABPB1-205ENST00000429662 BCAR3O75815 825 aa11.13□□□□□ -0.63
GABPB1-205ENST00000429662 TIE1P35590 1138 aa11.13□□□□□ -0.63
GABPB1-205ENST00000429662 CABLES1Q8TDN4 633 aa11.13□□□□□ -0.63
GABPB1-205ENST00000429662 NUBP1P53384 320 aa11.12□□□□□ -0.63
GABPB1-205ENST00000429662 FAM98CQ17RN3 349 aaKnown RBP11.12□□□□□ -0.63
GABPB1-205ENST00000429662 TRAK1Q9UPV9 953 aa11.12□□□□□ -0.63
GABPB1-205ENST00000429662 LAS1LQ9Y4W2 734 aaKnown RBP11.12□□□□□ -0.63
GABPB1-205ENST00000429662 QRICH2Q9H0J4 1663 aa11.12□□□□□ -0.63
GABPB1-205ENST00000429662 FAM83GA6ND36 823 aa11.11□□□□□ -0.63
GABPB1-205ENST00000429662 RARSP54136 660 aaKnown RBP11.11□□□□□ -0.63
GABPB1-205ENST00000429662 C1QTNF8P60827 252 aa11.11□□□□□ -0.63
GABPB1-205ENST00000429662 BECN1Q14457 450 aa11.11□□□□□ -0.63
GABPB1-205ENST00000429662 TCP11L2Q8N4U5 519 aa11.11□□□□□ -0.63
GABPB1-205ENST00000429662 PNNQ9H307 717 aaKnown RBP11.11□□□□□ -0.63
GABPB1-205ENST00000429662 PEAK1Q9H792 1746 aa11.1□□□□□ -0.63
GABPB1-205ENST00000429662 POTEMA6NI47 508 aa11.1□□□□□ -0.63
GABPB1-205ENST00000429662 SLC12A5Q9H2X9 1139 aa11.1□□□□□ -0.63
GABPB1-205ENST00000429662 RWDD1Q9H446 243 aaPredicted RBP11.1□□□□□ -0.63
GABPB1-205ENST00000429662 SBF2Q86WG5 1849 aa11.09□□□□□ -0.63
GABPB1-205ENST00000429662 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
GABPB1-205ENST00000429662 RGS3P49796 1198 aa11.09□□□□□ -0.63
GABPB1-205ENST00000429662 MTHFSP49914 203 aa11.09□□□□□ -0.63
GABPB1-205ENST00000429662 MAMSTRQ6ZN01 415 aa11.09□□□□□ -0.63
GABPB1-205ENST00000429662 SHANK3Q9BYB0 1731 aa11.09□□□□□ -0.63
GABPB1-205ENST00000429662 ABCC11Q96J66 1382 aa11.08□□□□□ -0.64
GABPB1-205ENST00000429662 IL16Q14005 1332 aa11.08□□□□□ -0.64
GABPB1-205ENST00000429662 SPATA31A5Q5VU36 1347 aa11.08□□□□□ -0.64
GABPB1-205ENST00000429662 SPATA31A7Q8IWB4 1347 aa11.08□□□□□ -0.64
GABPB1-205ENST00000429662 IGHDP01880 384 aa11.08□□□□□ -0.64
GABPB1-205ENST00000429662 NFKBIBQ15653 356 aa11.08□□□□□ -0.64
GABPB1-205ENST00000429662 UPF2Q9HAU5 1272 aaKnown RBP11.08□□□□□ -0.64
GABPB1-205ENST00000429662 SBNO1A3KN83 1393 aa11.07□□□□□ -0.64
GABPB1-205ENST00000429662 GSE1Q14687 1217 aa11.07□□□□□ -0.64
GABPB1-205ENST00000429662 POTEGQ6S5H5 508 aa11.07□□□□□ -0.64
GABPB1-205ENST00000429662 COG6Q9Y2V7 657 aa11.07□□□□□ -0.64
GABPB1-205ENST00000429662 KCNQ2O43526 872 aa11.05□□□□□ -0.64
GABPB1-205ENST00000429662 TRIM37O94972 964 aa11.05□□□□□ -0.64
GABPB1-205ENST00000429662 ZKSCAN2Q63HK3 967 aa11.05□□□□□ -0.64
GABPB1-205ENST00000429662 SKAP1Q86WV1 359 aa11.05□□□□□ -0.64
GABPB1-205ENST00000429662 PANK1Q8TE04 598 aa11.05□□□□□ -0.64
GABPB1-205ENST00000429662 PDGFDQ9GZP0 370 aaPredicted RBP11.05□□□□□ -0.64
GABPB1-205ENST00000429662 TERF2IPQ9NYB0 399 aa11.05□□□□□ -0.64
GABPB1-205ENST00000429662 COLQQ9Y215 455 aaPredicted RBP11.05□□□□□ -0.64
GABPB1-205ENST00000429662 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
GABPB1-205ENST00000429662 PHRF1Q9P1Y6 1649 aaKnown RBP11.05□□□□□ -0.64
GABPB1-205ENST00000429662 TULP4Q9NRJ4 1543 aa11.05□□□□□ -0.64
GABPB1-205ENST00000429662 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
GABPB1-205ENST00000429662 U2AF1L5P0DN76 240 aaPredicted RBP11.04□□□□□ -0.64
GABPB1-205ENST00000429662 U2AF1Q01081 240 aaKnown RBP eCLIP11.04□□□□□ -0.64
GABPB1-205ENST00000429662 TMEM132EQ6IEE7 984 aa11.04□□□□□ -0.64
GABPB1-205ENST00000429662 KRT28Q7Z3Y7 464 aa11.04□□□□□ -0.64
GABPB1-205ENST00000429662 FRAT1Q92837 279 aaPredicted RBP11.04□□□□□ -0.64
GABPB1-205ENST00000429662 SGIP1Q9BQI5 828 aa11.04□□□□□ -0.64
GABPB1-205ENST00000429662 SPON1Q9HCB6 807 aa11.04□□□□□ -0.64
GABPB1-205ENST00000429662 PARP4Q9UKK3 1724 aaKnown RBP11.04□□□□□ -0.64
GABPB1-205ENST00000429662 PTGER2P43116 358 aa11.03□□□□□ -0.64
GABPB1-205ENST00000429662 MVPQ14764 893 aaKnown RBP11.03□□□□□ -0.64
GABPB1-205ENST00000429662 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
GABPB1-205ENST00000429662 WAPLQ7Z5K2 1190 aa11.03□□□□□ -0.64
GABPB1-205ENST00000429662 ZNF428Q96B54 188 aa11.03□□□□□ -0.64
GABPB1-205ENST00000429662 CHMP4BQ9H444 224 aaKnown RBP11.03□□□□□ -0.64
GABPB1-205ENST00000429662 ANO8Q9HCE9 1232 aaPredicted RBP11.03□□□□□ -0.64
GABPB1-205ENST00000429662 SCUBE2Q9NQ36 999 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms