RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 CDC42BPBQ9Y5S2 1711 aa16.6■□□□□ 0.25
SGMS1-203ENST00000429490 FOXO3O43524 673 aa16.6■□□□□ 0.25
SGMS1-203ENST00000429490 ZNF592Q92610 1267 aa16.6■□□□□ 0.25
SGMS1-203ENST00000429490 FBXW7Q969H0 707 aa16.6■□□□□ 0.25
SGMS1-203ENST00000429490 LMBRD1Q9NUN5 540 aa16.6■□□□□ 0.25
SGMS1-203ENST00000429490 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
SGMS1-203ENST00000429490 GNAI3P08754 354 aa16.59■□□□□ 0.25
SGMS1-203ENST00000429490 PDE1AP54750 535 aa16.59■□□□□ 0.25
SGMS1-203ENST00000429490 FERMT3Q86UX7 667 aa16.59■□□□□ 0.25
SGMS1-203ENST00000429490 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
SGMS1-203ENST00000429490 HDGFP51858 240 aaKnown RBP16.59■□□□□ 0.25
SGMS1-203ENST00000429490 ZRSR1Q15695 479 aaKnown RBP16.59■□□□□ 0.25
SGMS1-203ENST00000429490 G2E3Q7L622 706 aa16.58■□□□□ 0.25
SGMS1-203ENST00000429490 MCM2P49736 904 aa16.58■□□□□ 0.24
SGMS1-203ENST00000429490 TMEM63CQ9P1W3 806 aa16.58■□□□□ 0.24
SGMS1-203ENST00000429490 LRRFIP2Q9Y608 721 aaKnown RBP16.58■□□□□ 0.24
SGMS1-203ENST00000429490 OFD1O75665 1012 aa16.58■□□□□ 0.24
SGMS1-203ENST00000429490 HCLS1P14317 486 aaPredicted RBP16.57■□□□□ 0.24
SGMS1-203ENST00000429490 HSP90B1P14625 803 aaKnown RBP16.57■□□□□ 0.24
SGMS1-203ENST00000429490 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
SGMS1-203ENST00000429490 LRSAM1Q6UWE0 723 aa16.57■□□□□ 0.24
SGMS1-203ENST00000429490 C9orf78Q9NZ63 289 aaPredicted RBP16.57■□□□□ 0.24
SGMS1-203ENST00000429490 ATP6V1DQ9Y5K8 247 aa16.57■□□□□ 0.24
SGMS1-203ENST00000429490 CD109Q6YHK3 1445 aa16.57■□□□□ 0.24
SGMS1-203ENST00000429490 IQGAP3Q86VI3 1631 aa16.57■□□□□ 0.24
SGMS1-203ENST00000429490 NLRP6P59044 892 aa16.57■□□□□ 0.24
SGMS1-203ENST00000429490 KIF2CQ99661 725 aa16.57■□□□□ 0.24
SGMS1-203ENST00000429490 TTC12Q9H892 705 aaPredicted RBP16.57■□□□□ 0.24
SGMS1-203ENST00000429490 SPG7Q9UQ90 795 aa16.57■□□□□ 0.24
SGMS1-203ENST00000429490 TRPM2O94759 1503 aa16.57■□□□□ 0.24
SGMS1-203ENST00000429490 SRGAP3O43295 1099 aa16.57■□□□□ 0.24
SGMS1-203ENST00000429490 WDR33Q9C0J8 1336 aaKnown RBP16.56■□□□□ 0.24
SGMS1-203ENST00000429490 HDGFL1Q5TGJ6 251 aa16.56■□□□□ 0.24
SGMS1-203ENST00000429490 SLC26A8Q96RN1 970 aa16.56■□□□□ 0.24
SGMS1-203ENST00000429490 SBNO2Q9Y2G9 1366 aa16.56■□□□□ 0.24
SGMS1-203ENST00000429490 CLTCL1P53675 1640 aa16.56■□□□□ 0.24
SGMS1-203ENST00000429490 CCDC30Q5VVM6 783 aa16.56■□□□□ 0.24
SGMS1-203ENST00000429490 MADDQ8WXG6 1647 aa16.56■□□□□ 0.24
SGMS1-203ENST00000429490 WASLO00401 505 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-203ENST00000429490 IFIT2P09913 472 aaKnown RBP16.55■□□□□ 0.24
SGMS1-203ENST00000429490 ZKSCAN5Q9Y2L8 839 aa16.55■□□□□ 0.24
SGMS1-203ENST00000429490 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
SGMS1-203ENST00000429490 C17orf53Q8N3J3 647 aaPredicted RBP16.55■□□□□ 0.24
SGMS1-203ENST00000429490 TSC1Q92574 1164 aa16.55■□□□□ 0.24
SGMS1-203ENST00000429490 ATP7AQ04656 1500 aa16.55■□□□□ 0.24
SGMS1-203ENST00000429490 STK3Q13188 491 aa16.55■□□□□ 0.24
SGMS1-203ENST00000429490 CAMK4Q16566 473 aa16.55■□□□□ 0.24
SGMS1-203ENST00000429490 CCDC83Q8IWF9 413 aa16.55■□□□□ 0.24
SGMS1-203ENST00000429490 GOLGA6L6A8MZA4 724 aa16.54■□□□□ 0.24
SGMS1-203ENST00000429490 ZKSCAN1P17029 563 aaPredicted RBP16.54■□□□□ 0.24
SGMS1-203ENST00000429490 AIMP1Q12904 312 aaKnown RBP16.54■□□□□ 0.24
SGMS1-203ENST00000429490 BICD2Q8TD16 824 aa16.54■□□□□ 0.24
SGMS1-203ENST00000429490 GPT2Q8TD30 523 aa16.54■□□□□ 0.24
SGMS1-203ENST00000429490 NPATQ14207 1427 aa16.54■□□□□ 0.24
SGMS1-203ENST00000429490 MYO5CQ9NQX4 1742 aa16.54■□□□□ 0.24
SGMS1-203ENST00000429490 ANXA1P04083 346 aa16.53■□□□□ 0.24
SGMS1-203ENST00000429490 CEBPZQ03701 1054 aaKnown RBP16.53■□□□□ 0.24
SGMS1-203ENST00000429490 NSFL1CQ9UNZ2 370 aaKnown RBP16.53■□□□□ 0.24
SGMS1-203ENST00000429490 UNC13BO14795 1591 aa16.53■□□□□ 0.24
SGMS1-203ENST00000429490 MSH6P52701 1360 aa16.53■□□□□ 0.24
SGMS1-203ENST00000429490 CPA1P15085 419 aa16.53■□□□□ 0.24
SGMS1-203ENST00000429490 TEFQ10587 303 aa16.53■□□□□ 0.24
SGMS1-203ENST00000429490 USP48Q86UV5 1035 aa16.53■□□□□ 0.24
SGMS1-203ENST00000429490 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
SGMS1-203ENST00000429490 IL13P35225 146 aa16.53■□□□□ 0.24
SGMS1-203ENST00000429490 GIMAP6Q6P9H5 292 aa16.53■□□□□ 0.24
SGMS1-203ENST00000429490 EIF4A2Q14240 407 aaKnown RBP16.52■□□□□ 0.24
SGMS1-203ENST00000429490 GPATCH3Q96I76 525 aa16.52■□□□□ 0.24
SGMS1-203ENST00000429490 ESYT1Q9BSJ8 1104 aa16.52■□□□□ 0.24
SGMS1-203ENST00000429490 CNPY2Q9Y2B0 182 aa16.52■□□□□ 0.24
SGMS1-203ENST00000429490 FLIIQ13045 1269 aa16.52■□□□□ 0.24
SGMS1-203ENST00000429490 CNTROBQ8N137 903 aa16.52■□□□□ 0.24
SGMS1-203ENST00000429490 JAKMIP1Q96N16 626 aaKnown RBP16.52■□□□□ 0.24
SGMS1-203ENST00000429490 MAP7D2Q96T17 732 aa16.52■□□□□ 0.24
SGMS1-203ENST00000429490 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.52■□□□□ 0.24
SGMS1-203ENST00000429490 ZMYM3Q14202 1370 aa16.52■□□□□ 0.24
SGMS1-203ENST00000429490 OSCARQ8IYS5 282 aa16.52■□□□□ 0.23
SGMS1-203ENST00000429490 USHBP1Q8N6Y0 703 aa16.52■□□□□ 0.23
SGMS1-203ENST00000429490 GADD45BO75293 160 aaPredicted RBP16.51■□□□□ 0.23
SGMS1-203ENST00000429490 ADCY5O95622 1261 aa16.51■□□□□ 0.23
SGMS1-203ENST00000429490 CBX1P83916 185 aa16.51■□□□□ 0.23
SGMS1-203ENST00000429490 FAM69CQ0P6D2 419 aa16.51■□□□□ 0.23
SGMS1-203ENST00000429490 PALD1Q9ULE6 856 aa16.51■□□□□ 0.23
SGMS1-203ENST00000429490 NLRP1Q9C000 1473 aa16.51■□□□□ 0.23
SGMS1-203ENST00000429490 CLASP1Q7Z460 1538 aa16.51■□□□□ 0.23
SGMS1-203ENST00000429490 ZNF445P59923 1031 aa16.51■□□□□ 0.23
SGMS1-203ENST00000429490 ZHX1Q9UKY1 873 aaPredicted RBP16.51■□□□□ 0.23
SGMS1-203ENST00000429490 ASXL2Q76L83 1435 aa16.51■□□□□ 0.23
SGMS1-203ENST00000429490 H3BQV1 296 aa16.5■□□□□ 0.23
SGMS1-203ENST00000429490 IFFO2Q5TF58 517 aa16.5■□□□□ 0.23
SGMS1-203ENST00000429490 CLASRPQ8N2M8 674 aaKnown RBP16.5■□□□□ 0.23
SGMS1-203ENST00000429490 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
SGMS1-203ENST00000429490 SIL1Q9H173 461 aa16.5■□□□□ 0.23
SGMS1-203ENST00000429490 ABCC4O15439 1325 aa16.5■□□□□ 0.23
SGMS1-203ENST00000429490 SASS6Q6UVJ0 657 aa16.5■□□□□ 0.23
SGMS1-203ENST00000429490 RUFY2Q8WXA3 655 aa16.5■□□□□ 0.23
SGMS1-203ENST00000429490 PPP1R9BQ96SB3 815 aa16.5■□□□□ 0.23
SGMS1-203ENST00000429490 TRIM5Q9C035 493 aa16.5■□□□□ 0.23
SGMS1-203ENST00000429490 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
SGMS1-203ENST00000429490 PUS7Q96PZ0 661 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms