RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 ELL2O00472 640 aaPredicted RBP23.22■■□□□ 1.31
PDE6B-202ENST00000429163 GAS2L2Q8NHY3 880 aa23.22■■□□□ 1.31
PDE6B-202ENST00000429163 MAP3K19Q56UN5 1328 aa23.22■■□□□ 1.31
PDE6B-202ENST00000429163 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
PDE6B-202ENST00000429163 HSCBQ8IWL3 235 aa23.21■■□□□ 1.31
PDE6B-202ENST00000429163 SLC26A8Q96RN1 970 aa23.21■■□□□ 1.31
PDE6B-202ENST00000429163 CHMP5Q9NZZ3 219 aa23.21■■□□□ 1.31
PDE6B-202ENST00000429163 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
PDE6B-202ENST00000429163 DCTN1Q14203 1278 aa23.2■■□□□ 1.3
PDE6B-202ENST00000429163 ANKRD44Q8N8A2 993 aa23.2■■□□□ 1.3
PDE6B-202ENST00000429163 BABAM1Q9NWV8 329 aa23.19■■□□□ 1.3
PDE6B-202ENST00000429163 PIK3C2AO00443 1686 aa23.19■■□□□ 1.3
PDE6B-202ENST00000429163 RTL1A6NKG5 1358 aa23.18■■□□□ 1.3
PDE6B-202ENST00000429163 RTF1Q92541 710 aaKnown RBP23.18■■□□□ 1.3
PDE6B-202ENST00000429163 SLKQ9H2G2 1235 aaPredicted RBP23.18■■□□□ 1.3
PDE6B-202ENST00000429163 NGDNQ8NEJ9 315 aaKnown RBP23.17■■□□□ 1.3
PDE6B-202ENST00000429163 ATP10DQ9P241 1426 aa23.17■■□□□ 1.3
PDE6B-202ENST00000429163 LRRC37A3O60309 1634 aa23.17■■□□□ 1.3
PDE6B-202ENST00000429163 CIZ1Q9ULV3 898 aaPredicted RBP23.15■■□□□ 1.3
PDE6B-202ENST00000429163 CDC45O75419 566 aa23.15■■□□□ 1.3
PDE6B-202ENST00000429163 C1orf115Q9H7X2 142 aa23.15■■□□□ 1.3
PDE6B-202ENST00000429163 CEBPAP49715 358 aaPredicted RBP23.14■■□□□ 1.3
PDE6B-202ENST00000429163 MCM10Q7L590 875 aa23.14■■□□□ 1.3
PDE6B-202ENST00000429163 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
PDE6B-202ENST00000429163 CCT4P50991 539 aaKnown RBP23.13■■□□□ 1.29
PDE6B-202ENST00000429163 RGPD8O14715 1765 aaPredicted RBP23.13■■□□□ 1.29
PDE6B-202ENST00000429163 AMPHP49418 695 aa23.12■■□□□ 1.29
PDE6B-202ENST00000429163 CACNA1FO60840 1977 aa23.12■■□□□ 1.29
PDE6B-202ENST00000429163 MTHFSDQ2M296 383 aaKnown RBP23.12■■□□□ 1.29
PDE6B-202ENST00000429163 HMMRO75330 724 aa23.11■■□□□ 1.29
PDE6B-202ENST00000429163 CEP85Q6P2H3 762 aa23.11■■□□□ 1.29
PDE6B-202ENST00000429163 TBC1D9Q6ZT07 1266 aa23.11■■□□□ 1.29
PDE6B-202ENST00000429163 PLEKHM2Q8IWE5 1019 aa23.11■■□□□ 1.29
PDE6B-202ENST00000429163 EYA1Q99502 592 aa23.11■■□□□ 1.29
PDE6B-202ENST00000429163 NUTM2FA1L443 756 aa23.1■■□□□ 1.29
PDE6B-202ENST00000429163 DDIT3P35638 169 aa23.1■■□□□ 1.29
PDE6B-202ENST00000429163 TSPYL4Q9UJ04 414 aa23.1■■□□□ 1.29
PDE6B-202ENST00000429163 MARF1Q9Y4F3 1742 aaKnown RBP23.1■■□□□ 1.29
PDE6B-202ENST00000429163 CEP170BQ9Y4F5 1589 aaPredicted RBP23.09■■□□□ 1.29
PDE6B-202ENST00000429163 MSH6P52701 1360 aa23.08■■□□□ 1.29
PDE6B-202ENST00000429163 SLC4A2P04920 1241 aa23.08■■□□□ 1.28
PDE6B-202ENST00000429163 MCM4P33991 863 aa23.08■■□□□ 1.28
PDE6B-202ENST00000429163 TTC22Q5TAA0 569 aa23.08■■□□□ 1.28
PDE6B-202ENST00000429163 NLRP6P59044 892 aa23.06■■□□□ 1.28
PDE6B-202ENST00000429163 NWD1Q149M9 1564 aa23.06■■□□□ 1.28
PDE6B-202ENST00000429163 HOXC9P31274 260 aa23.06■■□□□ 1.28
PDE6B-202ENST00000429163 KIF2CQ99661 725 aa23.06■■□□□ 1.28
PDE6B-202ENST00000429163 CHMP4AQ9BY43 222 aa23.06■■□□□ 1.28
PDE6B-202ENST00000429163 GNAT3A8MTJ3 354 aa23.05■■□□□ 1.28
PDE6B-202ENST00000429163 PTMSP20962 102 aa23.05■■□□□ 1.28
PDE6B-202ENST00000429163 L1TD1Q5T7N2 865 aaKnown RBP23.05■■□□□ 1.28
PDE6B-202ENST00000429163 N4BP2Q86UW6 1770 aaPredicted RBP23.05■■□□□ 1.28
PDE6B-202ENST00000429163 PXDNLA1KZ92 1463 aa23.05■■□□□ 1.28
PDE6B-202ENST00000429163 DDX11L8A8MPP1 907 aa23.05■■□□□ 1.28
PDE6B-202ENST00000429163 KRT24Q2M2I5 525 aa23.05■■□□□ 1.28
PDE6B-202ENST00000429163 STK31Q9BXU1 1019 aa23.05■■□□□ 1.28
PDE6B-202ENST00000429163 GSPT1P15170 499 aaKnown RBP23.04■■□□□ 1.28
PDE6B-202ENST00000429163 CCDC30Q5VVM6 783 aa23.04■■□□□ 1.28
PDE6B-202ENST00000429163 CASC1Q6TDU7 716 aa23.03■■□□□ 1.28
PDE6B-202ENST00000429163 OSBPL3Q9H4L5 887 aa23.03■■□□□ 1.28
PDE6B-202ENST00000429163 MAP3K5Q99683 1374 aa23.03■■□□□ 1.28
PDE6B-202ENST00000429163 CHD2O14647 1828 aaKnown RBP23.03■■□□□ 1.28
PDE6B-202ENST00000429163 KCNA6P17658 529 aa23.02■■□□□ 1.28
PDE6B-202ENST00000429163 FAM208AQ9UK61 1670 aaKnown RBP23.02■■□□□ 1.28
PDE6B-202ENST00000429163 PHRF1Q9P1Y6 1649 aaKnown RBP23.01■■□□□ 1.27
PDE6B-202ENST00000429163 MEIS3Q99687 375 aa23.01■■□□□ 1.27
PDE6B-202ENST00000429163 ZNF142P52746 1687 aaPredicted RBP23■■□□□ 1.27
PDE6B-202ENST00000429163 K7ELQ4 463 aaPredicted RBP23■■□□□ 1.27
PDE6B-202ENST00000429163 GNAI3P08754 354 aa23■■□□□ 1.27
PDE6B-202ENST00000429163 RABEP1Q15276 862 aa23■■□□□ 1.27
PDE6B-202ENST00000429163 FOXO3O43524 673 aa23■■□□□ 1.27
PDE6B-202ENST00000429163 HSP90AB1P08238 724 aaKnown RBP23■■□□□ 1.27
PDE6B-202ENST00000429163 ISY1Q9ULR0 285 aaKnown RBP22.99■■□□□ 1.27
PDE6B-202ENST00000429163 GNAI2P04899 355 aa22.99■■□□□ 1.27
PDE6B-202ENST00000429163 SOX12O15370 315 aa22.98■■□□□ 1.27
PDE6B-202ENST00000429163 TAF7Q15545 349 aaPredicted RBP22.98■■□□□ 1.27
PDE6B-202ENST00000429163 ABTB2Q8N961 1025 aa22.97■■□□□ 1.27
PDE6B-202ENST00000429163 ADGRL3Q9HAR2 1447 aa22.97■■□□□ 1.27
PDE6B-202ENST00000429163 IL27Q8NEV9 243 aa22.96■■□□□ 1.27
PDE6B-202ENST00000429163 GBP4Q96PP9 640 aa22.96■■□□□ 1.27
PDE6B-202ENST00000429163 HOXB7P09629 217 aa22.96■■□□□ 1.27
PDE6B-202ENST00000429163 RAB3GAP1Q15042 981 aa22.96■■□□□ 1.27
PDE6B-202ENST00000429163 PHF8Q9UPP1 1060 aa22.96■■□□□ 1.27
PDE6B-202ENST00000429163 FLIIQ13045 1269 aa22.95■■□□□ 1.26
PDE6B-202ENST00000429163 ANKLE2Q86XL3 938 aa22.95■■□□□ 1.26
PDE6B-202ENST00000429163 IP6K1Q92551 441 aa22.95■■□□□ 1.26
PDE6B-202ENST00000429163 NFAT5O94916 1531 aa22.95■■□□□ 1.26
PDE6B-202ENST00000429163 CEMIPQ8WUJ3 1361 aa22.94■■□□□ 1.26
PDE6B-202ENST00000429163 REC8O95072 547 aa22.94■■□□□ 1.26
PDE6B-202ENST00000429163 CLEC17AQ6ZS10 378 aa22.94■■□□□ 1.26
PDE6B-202ENST00000429163 KCNH5Q8NCM2 988 aa22.94■■□□□ 1.26
PDE6B-202ENST00000429163 USP26Q9BXU7 913 aa22.94■■□□□ 1.26
PDE6B-202ENST00000429163 MED1Q15648 1581 aaPredicted RBP22.94■■□□□ 1.26
PDE6B-202ENST00000429163 G2E3Q7L622 706 aa22.94■■□□□ 1.26
PDE6B-202ENST00000429163 MIS18AQ9NYP9 233 aa22.93■■□□□ 1.26
PDE6B-202ENST00000429163 SDSP20132 328 aa22.93■■□□□ 1.26
PDE6B-202ENST00000429163 SKOR2Q2VWA4 1001 aaPredicted RBP22.93■■□□□ 1.26
PDE6B-202ENST00000429163 LTN1O94822 1766 aa22.92■■□□□ 1.26
PDE6B-202ENST00000429163 SPRYD3Q8NCJ5 442 aa22.92■■□□□ 1.26
PDE6B-202ENST00000429163 IL17REQ8NFR9 667 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms