RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 WWC3Q9ULE0 1092 aa16.76■□□□□ 0.27
ALMS1P1-201ENST00000428767 PRIM1P49642 420 aaKnown RBP16.75■□□□□ 0.27
ALMS1P1-201ENST00000428767 CCNL1Q9UK58 526 aaPredicted RBP16.75■□□□□ 0.27
ALMS1P1-201ENST00000428767 NSD2O96028 1365 aa16.75■□□□□ 0.27
ALMS1P1-201ENST00000428767 NME9Q86XW9 330 aa16.74■□□□□ 0.27
ALMS1P1-201ENST00000428767 TAF1LQ8IZX4 1826 aa16.74■□□□□ 0.27
ALMS1P1-201ENST00000428767 ANKRD36BQ8N2N9 1353 aa16.74■□□□□ 0.27
ALMS1P1-201ENST00000428767 LTV1Q96GA3 475 aaPredicted RBP16.72■□□□□ 0.27
ALMS1P1-201ENST00000428767 USP31Q70CQ4 1352 aa16.72■□□□□ 0.27
ALMS1P1-201ENST00000428767 CD2APQ9Y5K6 639 aa16.7■□□□□ 0.26
ALMS1P1-201ENST00000428767 KIF3CO14782 793 aa16.69■□□□□ 0.26
ALMS1P1-201ENST00000428767 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
ALMS1P1-201ENST00000428767 WDR90Q96KV7 1748 aa16.68■□□□□ 0.26
ALMS1P1-201ENST00000428767 USP47Q96K76 1375 aa16.68■□□□□ 0.26
ALMS1P1-201ENST00000428767 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
ALMS1P1-201ENST00000428767 SBNO2Q9Y2G9 1366 aa16.67■□□□□ 0.26
ALMS1P1-201ENST00000428767 CAPN15O75808 1086 aa16.67■□□□□ 0.26
ALMS1P1-201ENST00000428767 UBR3Q6ZT12 1888 aa16.67■□□□□ 0.26
ALMS1P1-201ENST00000428767 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
ALMS1P1-201ENST00000428767 MEGF6O75095 1541 aa16.66■□□□□ 0.26
ALMS1P1-201ENST00000428767 APLP1P51693 650 aa16.66■□□□□ 0.26
ALMS1P1-201ENST00000428767 C4BP0C0L5 1744 aa16.65■□□□□ 0.26
ALMS1P1-201ENST00000428767 PCNTO95613 3336 aa16.64■□□□□ 0.25
ALMS1P1-201ENST00000428767 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
ALMS1P1-201ENST00000428767 CICQ96RK0 1608 aaPredicted RBP16.63■□□□□ 0.25
ALMS1P1-201ENST00000428767 TMC1Q8TDI8 760 aa16.63■□□□□ 0.25
ALMS1P1-201ENST00000428767 IP6K1Q92551 441 aa16.63■□□□□ 0.25
ALMS1P1-201ENST00000428767 ITGB4P16144 1822 aa16.63■□□□□ 0.25
ALMS1P1-201ENST00000428767 ROCK2O75116 1388 aaKnown RBP16.63■□□□□ 0.25
ALMS1P1-201ENST00000428767 N4BP2Q86UW6 1770 aaPredicted RBP16.62■□□□□ 0.25
ALMS1P1-201ENST00000428767 DNAJC5GQ8N7S2 189 aa16.62■□□□□ 0.25
ALMS1P1-201ENST00000428767 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
ALMS1P1-201ENST00000428767 SMIM5Q71RC9 77 aa16.61■□□□□ 0.25
ALMS1P1-201ENST00000428767 PHF14O94880 888 aa16.6■□□□□ 0.25
ALMS1P1-201ENST00000428767 COL13A1Q5TAT6 717 aaPredicted RBP16.6■□□□□ 0.25
ALMS1P1-201ENST00000428767 HDGFL2Q7Z4V5 671 aaPredicted RBP16.6■□□□□ 0.25
ALMS1P1-201ENST00000428767 AMIGO3Q86WK7 504 aa16.6■□□□□ 0.25
ALMS1P1-201ENST00000428767 FLAD1Q8NFF5 587 aa16.6■□□□□ 0.25
ALMS1P1-201ENST00000428767 PALLDQ8WX93 1383 aa16.6■□□□□ 0.25
ALMS1P1-201ENST00000428767 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
ALMS1P1-201ENST00000428767 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
ALMS1P1-201ENST00000428767 AK7Q96M32 723 aa16.59■□□□□ 0.25
ALMS1P1-201ENST00000428767 TOMM70O94826 608 aa16.58■□□□□ 0.24
ALMS1P1-201ENST00000428767 HTRA3P83110 453 aa16.58■□□□□ 0.24
ALMS1P1-201ENST00000428767 USHBP1Q8N6Y0 703 aa16.58■□□□□ 0.24
ALMS1P1-201ENST00000428767 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
ALMS1P1-201ENST00000428767 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
ALMS1P1-201ENST00000428767 FBLN1P23142 703 aa16.57■□□□□ 0.24
ALMS1P1-201ENST00000428767 HOXC9P31274 260 aa16.57■□□□□ 0.24
ALMS1P1-201ENST00000428767 SLC12A5Q9H2X9 1139 aa16.57■□□□□ 0.24
ALMS1P1-201ENST00000428767 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
ALMS1P1-201ENST00000428767 AMPHP49418 695 aa16.56■□□□□ 0.24
ALMS1P1-201ENST00000428767 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
ALMS1P1-201ENST00000428767 MPRIPQ6WCQ1 1025 aa16.55■□□□□ 0.24
ALMS1P1-201ENST00000428767 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.54■□□□□ 0.24
ALMS1P1-201ENST00000428767 MAP2P11137 1827 aaKnown RBP16.54■□□□□ 0.24
ALMS1P1-201ENST00000428767 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
ALMS1P1-201ENST00000428767 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
ALMS1P1-201ENST00000428767 TNS4Q8IZW8 715 aa16.53■□□□□ 0.24
ALMS1P1-201ENST00000428767 KLRG1Q96E93 195 aa16.53■□□□□ 0.24
ALMS1P1-201ENST00000428767 NSD3Q9BZ95 1437 aa16.53■□□□□ 0.24
ALMS1P1-201ENST00000428767 BRCA1P38398 1863 aaKnown RBP16.52■□□□□ 0.24
ALMS1P1-201ENST00000428767 NBPF6Q5VWK0 638 aa16.52■□□□□ 0.24
ALMS1P1-201ENST00000428767 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
ALMS1P1-201ENST00000428767 NBPF4Q96M43 638 aa16.52■□□□□ 0.24
ALMS1P1-201ENST00000428767 TERF2IPQ9NYB0 399 aa16.52■□□□□ 0.24
ALMS1P1-201ENST00000428767 BCS1LQ9Y276 419 aa16.52■□□□□ 0.24
ALMS1P1-201ENST00000428767 COG3Q96JB2 828 aa16.51■□□□□ 0.23
ALMS1P1-201ENST00000428767 PCDH11XQ9BZA7 1347 aa16.5■□□□□ 0.23
ALMS1P1-201ENST00000428767 PCDH11YQ9BZA8 1340 aa16.5■□□□□ 0.23
ALMS1P1-201ENST00000428767 TATP17735 454 aaPredicted RBP16.5■□□□□ 0.23
ALMS1P1-201ENST00000428767 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
ALMS1P1-201ENST00000428767 CGNL1Q0VF96 1302 aa16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 SSFA2P28290 1259 aa16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 ARHGAP27Q6ZUM4 889 aa16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 RBM46Q8TBY0 533 aaKnown RBP16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 ARFGEF1Q9Y6D6 1849 aa16.49■□□□□ 0.23
ALMS1P1-201ENST00000428767 MMP10P09238 476 aa16.48■□□□□ 0.23
ALMS1P1-201ENST00000428767 PRELPP51888 382 aa16.48■□□□□ 0.23
ALMS1P1-201ENST00000428767 SMARCC1Q92922 1105 aaPredicted RBP16.48■□□□□ 0.23
ALMS1P1-201ENST00000428767 RTL1A6NKG5 1358 aa16.48■□□□□ 0.23
ALMS1P1-201ENST00000428767 KCPQ6ZWJ8 1503 aa16.47■□□□□ 0.23
ALMS1P1-201ENST00000428767 A0A0G2JLW4 131 aa16.47■□□□□ 0.23
ALMS1P1-201ENST00000428767 GNPATO15228 680 aa16.47■□□□□ 0.23
ALMS1P1-201ENST00000428767 SIN3AQ96ST3 1273 aa16.47■□□□□ 0.23
ALMS1P1-201ENST00000428767 CYP27B1O15528 508 aa16.46■□□□□ 0.23
ALMS1P1-201ENST00000428767 TNRC6CQ9HCJ0 1690 aaKnown RBP16.46■□□□□ 0.23
ALMS1P1-201ENST00000428767 C10orf71Q711Q0 1435 aa16.45■□□□□ 0.22
ALMS1P1-201ENST00000428767 C4AP0C0L4 1744 aa16.45■□□□□ 0.22
ALMS1P1-201ENST00000428767 FCHSD2O94868 740 aa16.45■□□□□ 0.22
ALMS1P1-201ENST00000428767 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
ALMS1P1-201ENST00000428767 C9orf131Q5VYM1 1079 aa16.45■□□□□ 0.22
ALMS1P1-201ENST00000428767 LOC102724428A0A0B4J2F2 783 aa16.44■□□□□ 0.22
ALMS1P1-201ENST00000428767 SIK1P57059 783 aa16.44■□□□□ 0.22
ALMS1P1-201ENST00000428767 PIGBQ92521 554 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms