RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 MIS18AQ9NYP9 233 aa19.42■□□□□ 0.7
GHDC-203ENST00000428494 CPS1P31327 1500 aa19.42■□□□□ 0.7
GHDC-203ENST00000428494 CDK12Q9NYV4 1490 aaPredicted RBP19.42■□□□□ 0.7
GHDC-203ENST00000428494 PTMSP20962 102 aa19.42■□□□□ 0.7
GHDC-203ENST00000428494 NASPP49321 788 aaPredicted RBP19.42■□□□□ 0.7
GHDC-203ENST00000428494 TRHP20396 242 aaPredicted RBP19.41■□□□□ 0.7
GHDC-203ENST00000428494 ATP10DQ9P241 1426 aa19.41■□□□□ 0.7
GHDC-203ENST00000428494 MLECQ14165 292 aa19.4■□□□□ 0.7
GHDC-203ENST00000428494 CAVIN1Q6NZI2 390 aaKnown RBP19.4■□□□□ 0.7
GHDC-203ENST00000428494 PODXL2Q9NZ53 605 aa19.4■□□□□ 0.7
GHDC-203ENST00000428494 RGS12O14924 1447 aa19.4■□□□□ 0.7
GHDC-203ENST00000428494 MSH6P52701 1360 aa19.39■□□□□ 0.7
GHDC-203ENST00000428494 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.7
GHDC-203ENST00000428494 EIF4A2Q14240 407 aaKnown RBP19.39■□□□□ 0.69
GHDC-203ENST00000428494 METP08581 1390 aa19.39■□□□□ 0.69
GHDC-203ENST00000428494 RPAP2Q8IXW5 612 aaPredicted RBP19.39■□□□□ 0.69
GHDC-203ENST00000428494 CCDC61Q9Y6R9 512 aa19.39■□□□□ 0.69
GHDC-203ENST00000428494 PLEKHG5O94827 1062 aa19.38■□□□□ 0.69
GHDC-203ENST00000428494 LMBRD1Q9NUN5 540 aa19.38■□□□□ 0.69
GHDC-203ENST00000428494 RTL1A6NKG5 1358 aa19.38■□□□□ 0.69
GHDC-203ENST00000428494 NUTM2FA1L443 756 aa19.38■□□□□ 0.69
GHDC-203ENST00000428494 CHL1O00533 1208 aa19.38■□□□□ 0.69
GHDC-203ENST00000428494 SOX12O15370 315 aa19.38■□□□□ 0.69
GHDC-203ENST00000428494 CYP2E1P05181 493 aaPredicted RBP19.38■□□□□ 0.69
GHDC-203ENST00000428494 A2ML1A8K2U0 1454 aa19.37■□□□□ 0.69
GHDC-203ENST00000428494 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
GHDC-203ENST00000428494 KIF24Q5T7B8 1368 aa19.37■□□□□ 0.69
GHDC-203ENST00000428494 NUCB2P80303 420 aa19.36■□□□□ 0.69
GHDC-203ENST00000428494 F6X3S4 739 aa19.36■□□□□ 0.69
GHDC-203ENST00000428494 FOXD4L5Q5VV16 416 aaPredicted RBP19.36■□□□□ 0.69
GHDC-203ENST00000428494 TSHZ3Q63HK5 1081 aa19.36■□□□□ 0.69
GHDC-203ENST00000428494 FOXD4L4Q8WXT5 416 aaPredicted RBP19.36■□□□□ 0.69
GHDC-203ENST00000428494 ZDHHC9Q9Y397 364 aa19.36■□□□□ 0.69
GHDC-203ENST00000428494 PRPF40AO75400 957 aaKnown RBP19.35■□□□□ 0.69
GHDC-203ENST00000428494 SLC4A10Q6U841 1118 aa19.35■□□□□ 0.69
GHDC-203ENST00000428494 DLC1Q96QB1 1528 aa19.35■□□□□ 0.69
GHDC-203ENST00000428494 CCDC173Q0VFZ6 552 aa19.35■□□□□ 0.69
GHDC-203ENST00000428494 ZSCAN23Q3MJ62 389 aa19.35■□□□□ 0.69
GHDC-203ENST00000428494 HSP90AB2PQ58FF8 381 aa19.35■□□□□ 0.69
GHDC-203ENST00000428494 G2E3Q7L622 706 aa19.35■□□□□ 0.69
GHDC-203ENST00000428494 PPP1R9BQ96SB3 815 aa19.35■□□□□ 0.69
GHDC-203ENST00000428494 ZMYND15Q9H091 742 aa19.35■□□□□ 0.69
GHDC-203ENST00000428494 RBM27Q9P2N5 1060 aaKnown RBP19.35■□□□□ 0.69
GHDC-203ENST00000428494 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
GHDC-203ENST00000428494 FOXO3O43524 673 aa19.34■□□□□ 0.69
GHDC-203ENST00000428494 REREQ9P2R6 1566 aa19.33■□□□□ 0.69
GHDC-203ENST00000428494 ST18O60284 1047 aa19.33■□□□□ 0.68
GHDC-203ENST00000428494 CASC1Q6TDU7 716 aa19.33■□□□□ 0.68
GHDC-203ENST00000428494 GPT2Q8TD30 523 aa19.32■□□□□ 0.68
GHDC-203ENST00000428494 RBSNQ9H1K0 784 aa19.32■□□□□ 0.68
GHDC-203ENST00000428494 PRIM1P49642 420 aaKnown RBP19.31■□□□□ 0.68
GHDC-203ENST00000428494 ZNF445P59923 1031 aa19.31■□□□□ 0.68
GHDC-203ENST00000428494 ANP32BQ92688 251 aaKnown RBP19.31■□□□□ 0.68
GHDC-203ENST00000428494 HSP90AA2PQ14568 343 aaPredicted RBP19.31■□□□□ 0.68
GHDC-203ENST00000428494 NSFL1CQ9UNZ2 370 aaKnown RBP19.31■□□□□ 0.68
GHDC-203ENST00000428494 EXOC6BQ9Y2D4 811 aa19.31■□□□□ 0.68
GHDC-203ENST00000428494 SETD1AO15047 1707 aaKnown RBP19.31■□□□□ 0.68
GHDC-203ENST00000428494 IBTKQ9P2D0 1353 aaPredicted RBP19.31■□□□□ 0.68
GHDC-203ENST00000428494 ERC2O15083 957 aa19.3■□□□□ 0.68
GHDC-203ENST00000428494 REC8O95072 547 aa19.3■□□□□ 0.68
GHDC-203ENST00000428494 PDE1AP54750 535 aa19.3■□□□□ 0.68
GHDC-203ENST00000428494 PTPRCP08575 1304 aa19.29■□□□□ 0.68
GHDC-203ENST00000428494 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.29■□□□□ 0.68
GHDC-203ENST00000428494 CWC22Q9HCG8 908 aaKnown RBP19.29■□□□□ 0.68
GHDC-203ENST00000428494 NEK4P51957 841 aa19.29■□□□□ 0.68
GHDC-203ENST00000428494 ZSCAN30Q86W11 494 aa19.29■□□□□ 0.68
GHDC-203ENST00000428494 NOL8Q76FK4 1167 aaKnown RBP19.28■□□□□ 0.68
GHDC-203ENST00000428494 KIAA0232Q92628 1395 aa19.27■□□□□ 0.68
GHDC-203ENST00000428494 TTC21BQ7Z4L5 1316 aa19.27■□□□□ 0.68
GHDC-203ENST00000428494 HAP1P54257 671 aaPredicted RBP19.27■□□□□ 0.68
GHDC-203ENST00000428494 VSIG10Q8N0Z9 540 aa19.26■□□□□ 0.67
GHDC-203ENST00000428494 TMEM63CQ9P1W3 806 aa19.26■□□□□ 0.67
GHDC-203ENST00000428494 KIAA1211Q6ZU35 1233 aa19.26■□□□□ 0.67
GHDC-203ENST00000428494 NECTIN2Q92692 538 aa19.26■□□□□ 0.67
GHDC-203ENST00000428494 TMX3Q96JJ7 454 aa19.26■□□□□ 0.67
GHDC-203ENST00000428494 ACEP12821 1306 aa19.26■□□□□ 0.67
GHDC-203ENST00000428494 HMMRO75330 724 aa19.25■□□□□ 0.67
GHDC-203ENST00000428494 MTHFSDQ2M296 383 aaKnown RBP19.25■□□□□ 0.67
GHDC-203ENST00000428494 TSPYL4Q9UJ04 414 aa19.25■□□□□ 0.67
GHDC-203ENST00000428494 PALD1Q9ULE6 856 aa19.25■□□□□ 0.67
GHDC-203ENST00000428494 CRB1P82279 1406 aa19.25■□□□□ 0.67
GHDC-203ENST00000428494 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
GHDC-203ENST00000428494 MON2Q7Z3U7 1717 aa19.25■□□□□ 0.67
GHDC-203ENST00000428494 SYCE3A1L190 88 aa19.24■□□□□ 0.67
GHDC-203ENST00000428494 FAM69CQ0P6D2 419 aa19.24■□□□□ 0.67
GHDC-203ENST00000428494 C3P01024 1663 aa19.24■□□□□ 0.67
GHDC-203ENST00000428494 MSNP26038 577 aaKnown RBP19.24■□□□□ 0.67
GHDC-203ENST00000428494 FOXD4L6Q3SYB3 417 aaPredicted RBP19.23■□□□□ 0.67
GHDC-203ENST00000428494 FOXD4L3Q6VB84 417 aaPredicted RBP19.23■□□□□ 0.67
GHDC-203ENST00000428494 OSBPL3Q9H4L5 887 aa19.23■□□□□ 0.67
GHDC-203ENST00000428494 MAP3K19Q56UN5 1328 aa19.23■□□□□ 0.67
GHDC-203ENST00000428494 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
GHDC-203ENST00000428494 RRP9O43818 475 aaKnown RBP19.22■□□□□ 0.67
GHDC-203ENST00000428494 RILPL2Q969X0 211 aa19.22■□□□□ 0.67
GHDC-203ENST00000428494 GNAI2P04899 355 aa19.21■□□□□ 0.67
GHDC-203ENST00000428494 ESYT1Q9BSJ8 1104 aa19.21■□□□□ 0.67
GHDC-203ENST00000428494 ROBO2Q9HCK4 1378 aa19.21■□□□□ 0.67
GHDC-203ENST00000428494 TRIM6-TRIM34B2RNG4 842 aa19.21■□□□□ 0.67
GHDC-203ENST00000428494 CCT4P50991 539 aaKnown RBP19.21■□□□□ 0.67
GHDC-203ENST00000428494 RTF1Q92541 710 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms