RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 RAPGEF4Q8WZA2 1011 aa22.75■■□□□ 1.23
VRK2-204ENST00000428021 KCNQ2O43526 872 aa22.73■■□□□ 1.23
VRK2-204ENST00000428021 TATP17735 454 aaPredicted RBP22.72■■□□□ 1.23
VRK2-204ENST00000428021 PARD3Q8TEW0 1356 aa22.71■■□□□ 1.23
VRK2-204ENST00000428021 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
VRK2-204ENST00000428021 MTHFSP49914 203 aa22.7■■□□□ 1.22
VRK2-204ENST00000428021 ACSBG1Q96GR2 724 aa22.7■■□□□ 1.22
VRK2-204ENST00000428021 RREB1Q92766 1687 aa22.69■■□□□ 1.22
VRK2-204ENST00000428021 IGSF1Q8N6C5 1336 aa22.69■■□□□ 1.22
VRK2-204ENST00000428021 PLSCR1O15162 318 aa22.69■■□□□ 1.22
VRK2-204ENST00000428021 CNGB1Q14028 1251 aaPredicted RBP22.69■■□□□ 1.22
VRK2-204ENST00000428021 KAT6BQ8WYB5 2073 aa22.68■■□□□ 1.22
VRK2-204ENST00000428021 PKD1L3Q7Z443 1732 aa22.68■■□□□ 1.22
VRK2-204ENST00000428021 RGPD3A6NKT7 1758 aaPredicted RBP22.67■■□□□ 1.22
VRK2-204ENST00000428021 RGPD4Q7Z3J3 1758 aa22.67■■□□□ 1.22
VRK2-204ENST00000428021 IL13P35225 146 aa22.66■■□□□ 1.22
VRK2-204ENST00000428021 CYP27B1O15528 508 aa22.65■■□□□ 1.22
VRK2-204ENST00000428021 NUP188Q5SRE5 1749 aa22.65■■□□□ 1.22
VRK2-204ENST00000428021 PCDH11XQ9BZA7 1347 aa22.64■■□□□ 1.22
VRK2-204ENST00000428021 PCDH11YQ9BZA8 1340 aa22.64■■□□□ 1.22
VRK2-204ENST00000428021 ZEB1P37275 1124 aaPredicted RBP22.64■■□□□ 1.21
VRK2-204ENST00000428021 PROM2Q8N271 834 aa22.64■■□□□ 1.21
VRK2-204ENST00000428021 BTAF1O14981 1849 aa22.64■■□□□ 1.21
VRK2-204ENST00000428021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.63■■□□□ 1.212e-6■■■■■ 29.2
VRK2-204ENST00000428021 DOT1LQ8TEK3 1739 aa22.62■■□□□ 1.21
VRK2-204ENST00000428021 PRIM1P49642 420 aaKnown RBP22.62■■□□□ 1.21
VRK2-204ENST00000428021 AEBP1Q8IUX7 1158 aa22.62■■□□□ 1.21
VRK2-204ENST00000428021 SPG7Q9UQ90 795 aa22.61■■□□□ 1.21
VRK2-204ENST00000428021 PLEKHG2Q9H7P9 1386 aa22.6■■□□□ 1.21
VRK2-204ENST00000428021 PSDA5PKW4 1024 aaPredicted RBP22.59■■□□□ 1.21
VRK2-204ENST00000428021 KDRP35968 1356 aa22.59■■□□□ 1.21
VRK2-204ENST00000428021 COL3A1P02461 1466 aaPredicted RBP22.59■■□□□ 1.21
VRK2-204ENST00000428021 NKX1-1Q15270 411 aaPredicted RBP22.58■■□□□ 1.21
VRK2-204ENST00000428021 TXNRD1Q16881 649 aa22.58■■□□□ 1.21
VRK2-204ENST00000428021 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
VRK2-204ENST00000428021 SRCAPQ6ZRS2 3230 aa22.57■■□□□ 1.2
VRK2-204ENST00000428021 R3HDM1Q15032 1099 aaKnown RBP22.57■■□□□ 1.2
VRK2-204ENST00000428021 SYTL4Q96C24 671 aaPredicted RBP22.57■■□□□ 1.2
VRK2-204ENST00000428021 DIAPH1O60610 1272 aaKnown RBP22.56■■□□□ 1.2
VRK2-204ENST00000428021 TOGARAM1Q9Y4F4 1720 aa22.56■■□□□ 1.2
VRK2-204ENST00000428021 PHKG2P15735 406 aa22.55■■□□□ 1.2
VRK2-204ENST00000428021 PPP2R1AP30153 589 aa22.55■■□□□ 1.2
VRK2-204ENST00000428021 DDX10Q13206 875 aaKnown RBP22.54■■□□□ 1.2
VRK2-204ENST00000428021 IFNL2Q8IZJ0 200 aa22.54■■□□□ 1.2
VRK2-204ENST00000428021 PLEKHO1Q53GL0 409 aaPredicted RBP22.53■■□□□ 1.2
VRK2-204ENST00000428021 NBPF14Q5TI25 921 aa22.53■■□□□ 1.2
VRK2-204ENST00000428021 ANO8Q9HCE9 1232 aaPredicted RBP22.53■■□□□ 1.2
VRK2-204ENST00000428021 ITGB4P16144 1822 aa22.52■■□□□ 1.2
VRK2-204ENST00000428021 HMOX1P09601 288 aa22.51■■□□□ 1.19
VRK2-204ENST00000428021 AMOTQ4VCS5 1084 aa22.51■■□□□ 1.19
VRK2-204ENST00000428021 LRRC4BQ9NT99 713 aa22.51■■□□□ 1.19
VRK2-204ENST00000428021 LY75O60449 1722 aa22.5■■□□□ 1.19
VRK2-204ENST00000428021 ZNF530Q6P9A1 599 aaPredicted RBP22.49■■□□□ 1.19
VRK2-204ENST00000428021 MPRIPQ6WCQ1 1025 aa22.49■■□□□ 1.19
VRK2-204ENST00000428021 PAPPAQ13219 1627 aa22.47■■□□□ 1.19
VRK2-204ENST00000428021 PIGBQ92521 554 aa22.47■■□□□ 1.19
VRK2-204ENST00000428021 CFAP53Q96M91 514 aa22.47■■□□□ 1.19
VRK2-204ENST00000428021 U2SURPO15042 1029 aaKnown RBP22.46■■□□□ 1.19
VRK2-204ENST00000428021 SLC27A3Q5K4L6 730 aa22.46■■□□□ 1.19
VRK2-204ENST00000428021 KCNQ4P56696 695 aa22.45■■□□□ 1.18
VRK2-204ENST00000428021 KDM6AO15550 1401 aaPredicted RBP22.45■■□□□ 1.18
VRK2-204ENST00000428021 HSP90AB1P08238 724 aaKnown RBP22.44■■□□□ 1.18
VRK2-204ENST00000428021 DCAF5Q96JK2 942 aa22.44■■□□□ 1.18
VRK2-204ENST00000428021 SLC15A2Q16348 729 aa22.43■■□□□ 1.18
VRK2-204ENST00000428021 ERVV-2B6SEH9 535 aa22.42■■□□□ 1.18
VRK2-204ENST00000428021 C1orf141Q5JVX7 400 aa22.42■■□□□ 1.18
VRK2-204ENST00000428021 STK32BQ9NY57 414 aa22.42■■□□□ 1.18
VRK2-204ENST00000428021 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
VRK2-204ENST00000428021 PALLDQ8WX93 1383 aa22.41■■□□□ 1.18
VRK2-204ENST00000428021 ZNF827Q17R98 1081 aa22.41■■□□□ 1.18
VRK2-204ENST00000428021 MTHFSDQ2M296 383 aaKnown RBP22.41■■□□□ 1.18
VRK2-204ENST00000428021 LRP5O75197 1615 aa22.4■■□□□ 1.18
VRK2-204ENST00000428021 RALBP1Q15311 655 aa22.4■■□□□ 1.18
VRK2-204ENST00000428021 PDGFDQ9GZP0 370 aaPredicted RBP22.4■■□□□ 1.18
VRK2-204ENST00000428021 CCNL1Q9UK58 526 aaPredicted RBP22.4■■□□□ 1.18
VRK2-204ENST00000428021 CASZ1Q86V15 1759 aa22.4■■□□□ 1.18
VRK2-204ENST00000428021 AKAP4Q5JQC9 854 aa22.39■■□□□ 1.17
VRK2-204ENST00000428021 SMARCC1Q92922 1105 aaPredicted RBP22.39■■□□□ 1.17
VRK2-204ENST00000428021 AKT1S1Q96B36 256 aa22.39■■□□□ 1.17
VRK2-204ENST00000428021 RSPH6AQ9H0K4 717 aa22.39■■□□□ 1.17
VRK2-204ENST00000428021 ASAP1Q9ULH1 1129 aa22.39■■□□□ 1.17
VRK2-204ENST00000428021 NUDCQ9Y266 331 aa22.39■■□□□ 1.17
VRK2-204ENST00000428021 SCN11AQ9UI33 1791 aa22.38■■□□□ 1.17
VRK2-204ENST00000428021 ATG3Q9NT62 314 aa22.37■■□□□ 1.17
VRK2-204ENST00000428021 U2AF1L5P0DN76 240 aaPredicted RBP22.36■■□□□ 1.17
VRK2-204ENST00000428021 U2AF1Q01081 240 aaKnown RBP eCLIP22.36■■□□□ 1.17
VRK2-204ENST00000428021 LGR6Q9HBX8 967 aa22.36■■□□□ 1.17
VRK2-204ENST00000428021 PRKAR2BP31323 418 aa22.35■■□□□ 1.17
VRK2-204ENST00000428021 CABP4P57796 275 aa22.35■■□□□ 1.17
VRK2-204ENST00000428021 PHACTR3Q96KR7 559 aa22.35■■□□□ 1.17
VRK2-204ENST00000428021 TAF1LQ8IZX4 1826 aa22.35■■□□□ 1.17
VRK2-204ENST00000428021 VIRMAQ69YN4 1812 aaKnown RBP22.34■■□□□ 1.17
VRK2-204ENST00000428021 ADAMTS7Q9UKP4 1686 aa22.34■■□□□ 1.17
VRK2-204ENST00000428021 C5P01031 1676 aa22.33■■□□□ 1.17
VRK2-204ENST00000428021 LOC102724428A0A0B4J2F2 783 aa22.33■■□□□ 1.17
VRK2-204ENST00000428021 RNMTO43148 476 aaKnown RBP22.33■■□□□ 1.17
VRK2-204ENST00000428021 FCHSD2O94868 740 aa22.33■■□□□ 1.17
VRK2-204ENST00000428021 SIK1P57059 783 aa22.33■■□□□ 1.17
VRK2-204ENST00000428021 NFATC2IPQ8NCF5 419 aa22.33■■□□□ 1.17
VRK2-204ENST00000428021 TUBGCP6Q96RT7 1819 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms