RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 WASHC2AQ641Q2 1341 aa28.24■■■□□ 2.11
HSPG2-205ENST00000427897 RREB1Q92766 1687 aa28.23■■■□□ 2.11
HSPG2-205ENST00000427897 SYTL4Q96C24 671 aaPredicted RBP28.23■■■□□ 2.11
HSPG2-205ENST00000427897 NUP188Q5SRE5 1749 aa28.21■■■□□ 2.11
HSPG2-205ENST00000427897 NHSQ6T4R5 1651 aa28.19■■■□□ 2.1
HSPG2-205ENST00000427897 RGPD3A6NKT7 1758 aaPredicted RBP28.19■■■□□ 2.1
HSPG2-205ENST00000427897 RGPD4Q7Z3J3 1758 aa28.19■■■□□ 2.1
HSPG2-205ENST00000427897 MEGF6O75095 1541 aa28.19■■■□□ 2.1
HSPG2-205ENST00000427897 TXNRD1Q16881 649 aa28.18■■■□□ 2.1
HSPG2-205ENST00000427897 PRIM1P49642 420 aaKnown RBP28.15■■■□□ 2.1
HSPG2-205ENST00000427897 EYA1Q99502 592 aa28.15■■■□□ 2.1
HSPG2-205ENST00000427897 PCDH11XQ9BZA7 1347 aa28.15■■■□□ 2.1
HSPG2-205ENST00000427897 PCDH11YQ9BZA8 1340 aa28.15■■■□□ 2.1
HSPG2-205ENST00000427897 PROM2Q8N271 834 aa28.13■■■□□ 2.09
HSPG2-205ENST00000427897 SPG7Q9UQ90 795 aa28.13■■■□□ 2.09
HSPG2-205ENST00000427897 EIF4A2Q14240 407 aaKnown RBP28.12■■■□□ 2.09
HSPG2-205ENST00000427897 STK32BQ9NY57 414 aa28.12■■■□□ 2.09
HSPG2-205ENST00000427897 BTAF1O14981 1849 aa28.11■■■□□ 2.09
HSPG2-205ENST00000427897 CNGB1Q14028 1251 aaPredicted RBP28.11■■■□□ 2.09
HSPG2-205ENST00000427897 AMER1Q5JTC6 1135 aaPredicted RBP28.08■■■□□ 2.09
HSPG2-205ENST00000427897 CC2D1BQ5T0F9 858 aaKnown RBP28.08■■■□□ 2.09
HSPG2-205ENST00000427897 DOT1LQ8TEK3 1739 aa28.08■■■□□ 2.09
HSPG2-205ENST00000427897 SHANK3Q9BYB0 1731 aa28.08■■■□□ 2.09
HSPG2-205ENST00000427897 LRP5O75197 1615 aa28.05■■■□□ 2.08
HSPG2-205ENST00000427897 ANO8Q9HCE9 1232 aaPredicted RBP28.05■■■□□ 2.08
HSPG2-205ENST00000427897 SLC15A2Q16348 729 aa28.04■■■□□ 2.08
HSPG2-205ENST00000427897 PER1O15534 1290 aaPredicted RBP28.03■■■□□ 2.08
HSPG2-205ENST00000427897 SLC27A3Q5K4L6 730 aa28.03■■■□□ 2.08
HSPG2-205ENST00000427897 CYP27B1O15528 508 aa28.02■■■□□ 2.08
HSPG2-205ENST00000427897 MPRIPQ6WCQ1 1025 aa28.02■■■□□ 2.08
HSPG2-205ENST00000427897 SPON1Q9HCB6 807 aa28.02■■■□□ 2.08
HSPG2-205ENST00000427897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.02■■■□□ 2.08
HSPG2-205ENST00000427897 PPP1R1BQ9UD71 204 aaPredicted RBP28.01■■■□□ 2.07
HSPG2-205ENST00000427897 NCAPD2Q15021 1401 aa28.01■■■□□ 2.07
HSPG2-205ENST00000427897 IFNL2Q8IZJ0 200 aa28■■■□□ 2.07
HSPG2-205ENST00000427897 IGSF1Q8N6C5 1336 aa27.99■■■□□ 2.07
HSPG2-205ENST00000427897 MTHFSP49914 203 aa27.99■■■□□ 2.07
HSPG2-205ENST00000427897 PKD1L3Q7Z443 1732 aa27.98■■■□□ 2.07
HSPG2-205ENST00000427897 PLEKHO1Q53GL0 409 aaPredicted RBP27.97■■■□□ 2.07
HSPG2-205ENST00000427897 LRRC4BQ9NT99 713 aa27.96■■■□□ 2.07
HSPG2-205ENST00000427897 CCNL1Q9UK58 526 aaPredicted RBP27.96■■■□□ 2.07
HSPG2-205ENST00000427897 PHKG2P15735 406 aa27.94■■■□□ 2.06
HSPG2-205ENST00000427897 KCNQ4P56696 695 aa27.94■■■□□ 2.06
HSPG2-205ENST00000427897 SULT6B1Q6IMI4 303 aa27.94■■■□□ 2.06
HSPG2-205ENST00000427897 ZBTB7AO95365 584 aa27.93■■■□□ 2.06
HSPG2-205ENST00000427897 HMGB2P26583 209 aaKnown RBP27.93■■■□□ 2.06
HSPG2-205ENST00000427897 NKX1-1Q15270 411 aaPredicted RBP27.93■■■□□ 2.06
HSPG2-205ENST00000427897 AMOTQ4VCS5 1084 aa27.93■■■□□ 2.06
HSPG2-205ENST00000427897 SRCAPQ6ZRS2 3230 aa27.93■■■□□ 2.06
HSPG2-205ENST00000427897 SMARCC1Q92922 1105 aaPredicted RBP27.92■■■□□ 2.06
HSPG2-205ENST00000427897 TMOD3Q9NYL9 352 aa27.92■■■□□ 2.06
HSPG2-205ENST00000427897 NPC1L1Q9UHC9 1359 aa27.91■■■□□ 2.06
HSPG2-205ENST00000427897 HSP90AB1P08238 724 aaKnown RBP27.91■■■□□ 2.06
HSPG2-205ENST00000427897 IL13P35225 146 aa27.91■■■□□ 2.06
HSPG2-205ENST00000427897 PDGFDQ9GZP0 370 aaPredicted RBP27.91■■■□□ 2.06
HSPG2-205ENST00000427897 TFCP2L1Q9NZI6 479 aa27.91■■■□□ 2.06
HSPG2-205ENST00000427897 DIAPH1O60610 1272 aaKnown RBP27.9■■■□□ 2.06
HSPG2-205ENST00000427897 C1orf141Q5JVX7 400 aa27.9■■■□□ 2.06
HSPG2-205ENST00000427897 ZNF530Q6P9A1 599 aaPredicted RBP27.9■■■□□ 2.06
HSPG2-205ENST00000427897 ATF5Q9Y2D1 282 aaPredicted RBP27.9■■■□□ 2.06
HSPG2-205ENST00000427897 PLEKHG2Q9H7P9 1386 aa27.89■■■□□ 2.06
HSPG2-205ENST00000427897 AEBP1Q8IUX7 1158 aa27.89■■■□□ 2.06
HSPG2-205ENST00000427897 ITGB4P16144 1822 aa27.88■■■□□ 2.05
HSPG2-205ENST00000427897 LY75O60449 1722 aa27.88■■■□□ 2.05
HSPG2-205ENST00000427897 ZNF827Q17R98 1081 aa27.88■■■□□ 2.05
HSPG2-205ENST00000427897 PIGBQ92521 554 aa27.88■■■□□ 2.05
HSPG2-205ENST00000427897 PALLDQ8WX93 1383 aa27.87■■■□□ 2.05
HSPG2-205ENST00000427897 AKT1S1Q96B36 256 aa27.86■■■□□ 2.05
HSPG2-205ENST00000427897 CASZ1Q86V15 1759 aa27.86■■■□□ 2.05
HSPG2-205ENST00000427897 MSH5O43196 834 aa27.85■■■□□ 2.05
HSPG2-205ENST00000427897 MTFR1LQ9H019 292 aa27.85■■■□□ 2.05
HSPG2-205ENST00000427897 PAPPAQ13219 1627 aa27.85■■■□□ 2.05
HSPG2-205ENST00000427897 TOGARAM1Q9Y4F4 1720 aa27.84■■■□□ 2.05
HSPG2-205ENST00000427897 HMOX1P09601 288 aa27.84■■■□□ 2.05
HSPG2-205ENST00000427897 DCAF5Q96JK2 942 aa27.84■■■□□ 2.05
HSPG2-205ENST00000427897 CFAP53Q96M91 514 aa27.84■■■□□ 2.05
HSPG2-205ENST00000427897 U2SURPO15042 1029 aaKnown RBP27.82■■■□□ 2.04
HSPG2-205ENST00000427897 ERVV-2B6SEH9 535 aa27.81■■■□□ 2.04
HSPG2-205ENST00000427897 CABP4P57796 275 aa27.81■■■□□ 2.04
HSPG2-205ENST00000427897 KDRP35968 1356 aa27.79■■■□□ 2.04
HSPG2-205ENST00000427897 DCAF8L1A6NGE4 600 aa27.79■■■□□ 2.04
HSPG2-205ENST00000427897 SLC16A10Q8TF71 515 aa27.79■■■□□ 2.04
HSPG2-205ENST00000427897 ASAP1Q9ULH1 1129 aa27.78■■■□□ 2.04
HSPG2-205ENST00000427897 AK7Q96M32 723 aa27.77■■■□□ 2.04
HSPG2-205ENST00000427897 PNPLA7Q6ZV29 1317 aa27.76■■■□□ 2.03
HSPG2-205ENST00000427897 LOC102724428A0A0B4J2F2 783 aa27.76■■■□□ 2.03
HSPG2-205ENST00000427897 SIK1P57059 783 aa27.76■■■□□ 2.03
HSPG2-205ENST00000427897 AKAP4Q5JQC9 854 aa27.75■■■□□ 2.03
HSPG2-205ENST00000427897 NUDCQ9Y266 331 aa27.75■■■□□ 2.03
HSPG2-205ENST00000427897 C5P01031 1676 aa27.75■■■□□ 2.03
HSPG2-205ENST00000427897 POLD1P28340 1107 aa27.74■■■□□ 2.03
HSPG2-205ENST00000427897 ZEB1P37275 1124 aaPredicted RBP27.74■■■□□ 2.03
HSPG2-205ENST00000427897 ATP6V1AP38606 617 aa27.74■■■□□ 2.03
HSPG2-205ENST00000427897 RBM42Q9BTD8 480 aaKnown RBP27.74■■■□□ 2.03
HSPG2-205ENST00000427897 ATG3Q9NT62 314 aa27.74■■■□□ 2.03
HSPG2-205ENST00000427897 QSER1Q2KHR3 1735 aa27.73■■■□□ 2.03
HSPG2-205ENST00000427897 PTGER2P43116 358 aa27.73■■■□□ 2.03
HSPG2-205ENST00000427897 FLAD1Q8NFF5 587 aa27.73■■■□□ 2.03
HSPG2-205ENST00000427897 PPP2R1AP30153 589 aa27.71■■■□□ 2.03
HSPG2-205ENST00000427897 ARXQ96QS3 562 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms