RNA–Protein interactions for RNA: ENST00000427174.5

RPUSD3-205, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-205ENST00000427174 DIAPH1O60610 1272 aaKnown RBP29.02■■■□□ 2.24
RPUSD3-205ENST00000427174 RAPGEF4Q8WZA2 1011 aa29.02■■■□□ 2.24
RPUSD3-205ENST00000427174 TATP17735 454 aaPredicted RBP29■■■□□ 2.23
RPUSD3-205ENST00000427174 FAM196AQ6ZSG2 479 aa29■■■□□ 2.23
RPUSD3-205ENST00000427174 KAT6BQ8WYB5 2073 aa28.98■■■□□ 2.23
RPUSD3-205ENST00000427174 ZCRB1Q8TBF4 217 aaKnown RBP28.98■■■□□ 2.23
RPUSD3-205ENST00000427174 PRKRIP1Q9H875 184 aaPredicted RBP28.98■■■□□ 2.23
RPUSD3-205ENST00000427174 AEBP1Q8IUX7 1158 aa28.97■■■□□ 2.23
RPUSD3-205ENST00000427174 CFAP53Q96M91 514 aa28.96■■■□□ 2.23
RPUSD3-205ENST00000427174 NHSQ6T4R5 1651 aa28.95■■■□□ 2.22
RPUSD3-205ENST00000427174 MYBBP1AQ9BQG0 1328 aaKnown RBP28.94■■■□□ 2.22
RPUSD3-205ENST00000427174 SULT6B1Q6IMI4 303 aa28.94■■■□□ 2.22
RPUSD3-205ENST00000427174 CCDC125Q86Z20 511 aa28.94■■■□□ 2.22
RPUSD3-205ENST00000427174 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.94■■■□□ 2.22
RPUSD3-205ENST00000427174 DOT1LQ8TEK3 1739 aa28.93■■■□□ 2.22
RPUSD3-205ENST00000427174 DDX54Q8TDD1 881 aaKnown RBP28.9■■■□□ 2.22
RPUSD3-205ENST00000427174 PCDH11XQ9BZA7 1347 aa28.9■■■□□ 2.22
RPUSD3-205ENST00000427174 PCDH11YQ9BZA8 1340 aa28.9■■■□□ 2.22
RPUSD3-205ENST00000427174 TOGARAM1Q9Y4F4 1720 aa28.89■■■□□ 2.22
RPUSD3-205ENST00000427174 CYP27B1O15528 508 aa28.89■■■□□ 2.22
RPUSD3-205ENST00000427174 ITGB4P16144 1822 aa28.87■■■□□ 2.21
RPUSD3-205ENST00000427174 VIRMAQ69YN4 1812 aaKnown RBP28.87■■■□□ 2.21
RPUSD3-205ENST00000427174 TRIM37O94972 964 aa28.87■■■□□ 2.21
RPUSD3-205ENST00000427174 HMOX1P09601 288 aa28.87■■■□□ 2.21
RPUSD3-205ENST00000427174 SPG7Q9UQ90 795 aa28.87■■■□□ 2.21
RPUSD3-205ENST00000427174 BTAF1O14981 1849 aa28.86■■■□□ 2.21
RPUSD3-205ENST00000427174 RGPD3A6NKT7 1758 aaPredicted RBP28.85■■■□□ 2.21
RPUSD3-205ENST00000427174 RGPD4Q7Z3J3 1758 aa28.85■■■□□ 2.21
RPUSD3-205ENST00000427174 U2SURPO15042 1029 aaKnown RBP28.85■■■□□ 2.21
RPUSD3-205ENST00000427174 NUDCQ9Y266 331 aa28.84■■■□□ 2.21
RPUSD3-205ENST00000427174 NKX1-1Q15270 411 aaPredicted RBP28.83■■■□□ 2.21
RPUSD3-205ENST00000427174 PTF1AQ7RTS3 328 aa28.83■■■□□ 2.21
RPUSD3-205ENST00000427174 AMOTQ4VCS5 1084 aa28.82■■■□□ 2.2
RPUSD3-205ENST00000427174 PLEKHO1Q53GL0 409 aaPredicted RBP28.82■■■□□ 2.2
RPUSD3-205ENST00000427174 BCL11BQ9C0K0 894 aaPredicted RBP28.82■■■□□ 2.2
RPUSD3-205ENST00000427174 RSPH6AQ9H0K4 717 aa28.81■■■□□ 2.2
RPUSD3-205ENST00000427174 KCNQ2O43526 872 aa28.8■■■□□ 2.2
RPUSD3-205ENST00000427174 PHKG2P15735 406 aa28.8■■■□□ 2.2
RPUSD3-205ENST00000427174 SCN11AQ9UI33 1791 aa28.8■■■□□ 2.2
RPUSD3-205ENST00000427174 IFNL2Q8IZJ0 200 aa28.79■■■□□ 2.2
RPUSD3-205ENST00000427174 RREB1Q92766 1687 aa28.79■■■□□ 2.2
RPUSD3-205ENST00000427174 U2AF1L5P0DN76 240 aaPredicted RBP28.78■■■□□ 2.2
RPUSD3-205ENST00000427174 U2AF1Q01081 240 aaKnown RBP eCLIP28.78■■■□□ 2.2
RPUSD3-205ENST00000427174 SF3B2Q13435 895 aaKnown RBP28.78■■■□□ 2.2
RPUSD3-205ENST00000427174 ACSBG1Q96GR2 724 aa28.78■■■□□ 2.2
RPUSD3-205ENST00000427174 ADAMTS7Q9UKP4 1686 aa28.77■■■□□ 2.2
RPUSD3-205ENST00000427174 DEFB132Q7Z7B7 95 aa28.77■■■□□ 2.2
RPUSD3-205ENST00000427174 FCHSD2O94868 740 aa28.76■■■□□ 2.19
RPUSD3-205ENST00000427174 ZNF530Q6P9A1 599 aaPredicted RBP28.75■■■□□ 2.19
RPUSD3-205ENST00000427174 ANP32CO43423 234 aa28.74■■■□□ 2.19
RPUSD3-205ENST00000427174 APBA3O96018 575 aa28.74■■■□□ 2.19
RPUSD3-205ENST00000427174 BAG6P46379 1132 aa28.74■■■□□ 2.19
RPUSD3-205ENST00000427174 KDM6AO15550 1401 aaPredicted RBP28.73■■■□□ 2.19
RPUSD3-205ENST00000427174 PRKAR2BP31323 418 aa28.73■■■□□ 2.19
RPUSD3-205ENST00000427174 DLG5Q8TDM6 1919 aa28.73■■■□□ 2.19
RPUSD3-205ENST00000427174 PRIM1P49642 420 aaKnown RBP28.72■■■□□ 2.19
RPUSD3-205ENST00000427174 MTHFSDQ2M296 383 aaKnown RBP28.72■■■□□ 2.19
RPUSD3-205ENST00000427174 CAMKK2Q96RR4 588 aa28.72■■■□□ 2.19
RPUSD3-205ENST00000427174 LY75O60449 1722 aa28.72■■■□□ 2.19
RPUSD3-205ENST00000427174 EN1Q05925 392 aaPredicted RBP28.71■■■□□ 2.19
RPUSD3-205ENST00000427174 PHACTR3Q96KR7 559 aa28.71■■■□□ 2.19
RPUSD3-205ENST00000427174 NUP188Q5SRE5 1749 aa28.71■■■□□ 2.19
RPUSD3-205ENST00000427174 PLSCR1O15162 318 aa28.7■■■□□ 2.18
RPUSD3-205ENST00000427174 AKAP4Q5JQC9 854 aa28.69■■■□□ 2.18
RPUSD3-205ENST00000427174 HSP90AB1P08238 724 aaKnown RBP28.68■■■□□ 2.18
RPUSD3-205ENST00000427174 CCDC184Q52MB2 194 aa28.68■■■□□ 2.18
RPUSD3-205ENST00000427174 DCAF5Q96JK2 942 aa28.68■■■□□ 2.18
RPUSD3-205ENST00000427174 C1orf141Q5JVX7 400 aa28.67■■■□□ 2.18
RPUSD3-205ENST00000427174 PLEKHF1Q96S99 279 aa28.67■■■□□ 2.18
RPUSD3-205ENST00000427174 EZH2Q15910 746 aaKnown RBP28.66■■■□□ 2.18
RPUSD3-205ENST00000427174 SYTL4Q96C24 671 aaPredicted RBP28.65■■■□□ 2.18
RPUSD3-205ENST00000427174 SIPA1L3O60292 1781 aaPredicted RBP28.65■■■□□ 2.18
RPUSD3-205ENST00000427174 GAS2L2Q8NHY3 880 aa28.64■■■□□ 2.18
RPUSD3-205ENST00000427174 MRC1P22897 1456 aa28.64■■■□□ 2.17
RPUSD3-205ENST00000427174 ERVV-2B6SEH9 535 aa28.63■■■□□ 2.17
RPUSD3-205ENST00000427174 MPRIPQ6WCQ1 1025 aa28.63■■■□□ 2.17
RPUSD3-205ENST00000427174 PROM2Q8N271 834 aa28.62■■■□□ 2.17
RPUSD3-205ENST00000427174 MAP3K5Q99683 1374 aa28.62■■■□□ 2.17
RPUSD3-205ENST00000427174 PIGBQ92521 554 aa28.61■■■□□ 2.17
RPUSD3-205ENST00000427174 PNNQ9H307 717 aaKnown RBP28.59■■■□□ 2.17
RPUSD3-205ENST00000427174 LGR6Q9HBX8 967 aa28.59■■■□□ 2.17
RPUSD3-205ENST00000427174 ADAMTS8Q9UP79 889 aa28.59■■■□□ 2.17
RPUSD3-205ENST00000427174 PAPPAQ13219 1627 aa28.58■■■□□ 2.17
RPUSD3-205ENST00000427174 RNMTO43148 476 aaKnown RBP28.58■■■□□ 2.17
RPUSD3-205ENST00000427174 WDR43Q15061 677 aaKnown RBP eCLIP28.58■■■□□ 2.17
RPUSD3-205ENST00000427174 TAF1LQ8IZX4 1826 aa28.57■■■□□ 2.16
RPUSD3-205ENST00000427174 GNAT3A8MTJ3 354 aa28.57■■■□□ 2.16
RPUSD3-205ENST00000427174 TMOD3Q9NYL9 352 aa28.57■■■□□ 2.16
RPUSD3-205ENST00000427174 TXNRD1Q16881 649 aa28.56■■■□□ 2.16
RPUSD3-205ENST00000427174 CEMIPQ8WUJ3 1361 aa28.55■■■□□ 2.16
RPUSD3-205ENST00000427174 ZNF831Q5JPB2 1677 aa28.54■■■□□ 2.16
RPUSD3-205ENST00000427174 IL17REQ8NFR9 667 aa28.54■■■□□ 2.16
RPUSD3-205ENST00000427174 CABP4P57796 275 aa28.53■■■□□ 2.16
RPUSD3-205ENST00000427174 PNISRQ8TF01 805 aaKnown RBP28.53■■■□□ 2.16
RPUSD3-205ENST00000427174 SLC52A2Q9HAB3 445 aa28.53■■■□□ 2.16
RPUSD3-205ENST00000427174 MRS2Q9HD23 443 aa28.53■■■□□ 2.16
RPUSD3-205ENST00000427174 NFATC2IPQ8NCF5 419 aa28.52■■■□□ 2.16
RPUSD3-205ENST00000427174 PALLDQ8WX93 1383 aa28.51■■■□□ 2.16
RPUSD3-205ENST00000427174 NEFMP07197 916 aa28.51■■■□□ 2.15
RPUSD3-205ENST00000427174 NFE2L2Q16236 605 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms