RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 PER1O15534 1290 aaPredicted RBP21.71■■□□□ 1.07
AFF3-208ENST00000427118 ACSBG1Q96GR2 724 aa21.71■■□□□ 1.07
AFF3-208ENST00000427118 BCL11BQ9C0K0 894 aaPredicted RBP21.71■■□□□ 1.07
AFF3-208ENST00000427118 NHSQ6T4R5 1651 aa21.71■■□□□ 1.07
AFF3-208ENST00000427118 NSD2O96028 1365 aa21.71■■□□□ 1.07
AFF3-208ENST00000427118 POLKQ9UBT6 870 aa21.7■■□□□ 1.06
AFF3-208ENST00000427118 KIF24Q5T7B8 1368 aa21.7■■□□□ 1.06
AFF3-208ENST00000427118 R3HDM1Q15032 1099 aaKnown RBP21.69■■□□□ 1.06
AFF3-208ENST00000427118 PARD3Q8TEW0 1356 aa21.69■■□□□ 1.06
AFF3-208ENST00000427118 SMG6Q86US8 1419 aaKnown RBP21.69■■□□□ 1.06
AFF3-208ENST00000427118 RGPD3A6NKT7 1758 aaPredicted RBP21.69■■□□□ 1.06
AFF3-208ENST00000427118 RGPD4Q7Z3J3 1758 aa21.69■■□□□ 1.06
AFF3-208ENST00000427118 DDX54Q8TDD1 881 aaKnown RBP21.68■■□□□ 1.06
AFF3-208ENST00000427118 AMER1Q5JTC6 1135 aaPredicted RBP21.67■■□□□ 1.06
AFF3-208ENST00000427118 BTAF1O14981 1849 aa21.66■■□□□ 1.06
AFF3-208ENST00000427118 PROM2Q8N271 834 aa21.65■■□□□ 1.06
AFF3-208ENST00000427118 DOT1LQ8TEK3 1739 aa21.64■■□□□ 1.06
AFF3-208ENST00000427118 PLSCR1O15162 318 aa21.64■■□□□ 1.05
AFF3-208ENST00000427118 MORC1Q86VD1 984 aa21.64■■□□□ 1.05
AFF3-208ENST00000427118 ZCRB1Q8TBF4 217 aaKnown RBP21.64■■□□□ 1.05
AFF3-208ENST00000427118 PRKRIP1Q9H875 184 aaPredicted RBP21.64■■□□□ 1.05
AFF3-208ENST00000427118 NPC1L1Q9UHC9 1359 aa21.62■■□□□ 1.05
AFF3-208ENST00000427118 NCAPD2Q15021 1401 aa21.62■■□□□ 1.05
AFF3-208ENST00000427118 RAPGEF4Q8WZA2 1011 aa21.61■■□□□ 1.05
AFF3-208ENST00000427118 EYA1Q99502 592 aa21.61■■□□□ 1.05
AFF3-208ENST00000427118 ANO8Q9HCE9 1232 aaPredicted RBP21.61■■□□□ 1.05
AFF3-208ENST00000427118 EIF4A2Q14240 407 aaKnown RBP21.6■■□□□ 1.05
AFF3-208ENST00000427118 TATP17735 454 aaPredicted RBP21.59■■□□□ 1.05
AFF3-208ENST00000427118 PKD1L3Q7Z443 1732 aa21.58■■□□□ 1.05
AFF3-208ENST00000427118 TXNRD1Q16881 649 aa21.58■■□□□ 1.05
AFF3-208ENST00000427118 CC2D1BQ5T0F9 858 aaKnown RBP21.58■■□□□ 1.05
AFF3-208ENST00000427118 LRP5O75197 1615 aa21.58■■□□□ 1.04
AFF3-208ENST00000427118 PRIM1P49642 420 aaKnown RBP21.56■■□□□ 1.04
AFF3-208ENST00000427118 NBPF14Q5TI25 921 aa21.56■■□□□ 1.04
AFF3-208ENST00000427118 TOGARAM1Q9Y4F4 1720 aa21.55■■□□□ 1.04
AFF3-208ENST00000427118 CYP27B1O15528 508 aa21.54■■□□□ 1.04
AFF3-208ENST00000427118 SYTL4Q96C24 671 aaPredicted RBP21.54■■□□□ 1.04
AFF3-208ENST00000427118 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
AFF3-208ENST00000427118 RALBP1Q15311 655 aa21.53■■□□□ 1.04
AFF3-208ENST00000427118 PAPPAQ13219 1627 aa21.52■■□□□ 1.04
AFF3-208ENST00000427118 PDGFDQ9GZP0 370 aaPredicted RBP21.52■■□□□ 1.04
AFF3-208ENST00000427118 PCDH11XQ9BZA7 1347 aa21.52■■□□□ 1.03
AFF3-208ENST00000427118 PCDH11YQ9BZA8 1340 aa21.52■■□□□ 1.03
AFF3-208ENST00000427118 IGSF1Q8N6C5 1336 aa21.51■■□□□ 1.03
AFF3-208ENST00000427118 CASZ1Q86V15 1759 aa21.51■■□□□ 1.03
AFF3-208ENST00000427118 ITGB4P16144 1822 aa21.5■■□□□ 1.03
AFF3-208ENST00000427118 LRRC4BQ9NT99 713 aa21.5■■□□□ 1.03
AFF3-208ENST00000427118 KCNQ4P56696 695 aa21.49■■□□□ 1.03
AFF3-208ENST00000427118 LY75O60449 1722 aa21.49■■□□□ 1.03
AFF3-208ENST00000427118 AEBP1Q8IUX7 1158 aa21.48■■□□□ 1.03
AFF3-208ENST00000427118 MTHFSP49914 203 aa21.46■■□□□ 1.03
AFF3-208ENST00000427118 MRS2Q9HD23 443 aa21.46■■□□□ 1.03
AFF3-208ENST00000427118 IL13P35225 146 aa21.45■■□□□ 1.02
AFF3-208ENST00000427118 ZNF827Q17R98 1081 aa21.45■■□□□ 1.02
AFF3-208ENST00000427118 STK32BQ9NY57 414 aa21.45■■□□□ 1.02
AFF3-208ENST00000427118 SPG7Q9UQ90 795 aa21.45■■□□□ 1.02
AFF3-208ENST00000427118 SLC15A2Q16348 729 aa21.44■■□□□ 1.02
AFF3-208ENST00000427118 TUBGCP6Q96RT7 1819 aa21.43■■□□□ 1.02
AFF3-208ENST00000427118 NKX1-1Q15270 411 aaPredicted RBP21.43■■□□□ 1.02
AFF3-208ENST00000427118 PHKG2P15735 406 aa21.42■■□□□ 1.02
AFF3-208ENST00000427118 MPRIPQ6WCQ1 1025 aa21.42■■□□□ 1.02
AFF3-208ENST00000427118 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
AFF3-208ENST00000427118 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.42■■□□□ 1.02
AFF3-208ENST00000427118 SULT6B1Q6IMI4 303 aa21.41■■□□□ 1.02
AFF3-208ENST00000427118 ZBTB7AO95365 584 aa21.4■■□□□ 1.02
AFF3-208ENST00000427118 PPP2R1AP30153 589 aa21.39■■□□□ 1.01
AFF3-208ENST00000427118 SLC27A3Q5K4L6 730 aa21.39■■□□□ 1.01
AFF3-208ENST00000427118 IFNL2Q8IZJ0 200 aa21.39■■□□□ 1.01
AFF3-208ENST00000427118 PIGBQ92521 554 aa21.39■■□□□ 1.01
AFF3-208ENST00000427118 COL3A1P02461 1466 aaPredicted RBP21.39■■□□□ 1.01
AFF3-208ENST00000427118 AKT1S1Q96B36 256 aa21.38■■□□□ 1.01
AFF3-208ENST00000427118 CCNL1Q9UK58 526 aaPredicted RBP21.38■■□□□ 1.01
AFF3-208ENST00000427118 KDRP35968 1356 aa21.37■■□□□ 1.01
AFF3-208ENST00000427118 SPON1Q9HCB6 807 aa21.37■■□□□ 1.01
AFF3-208ENST00000427118 PALLDQ8WX93 1383 aa21.36■■□□□ 1.01
AFF3-208ENST00000427118 TAF1LQ8IZX4 1826 aa21.36■■□□□ 1.01
AFF3-208ENST00000427118 ZNF530Q6P9A1 599 aaPredicted RBP21.36■■□□□ 1.01
AFF3-208ENST00000427118 ATF5Q9Y2D1 282 aaPredicted RBP21.36■■□□□ 1.01
AFF3-208ENST00000427118 QSER1Q2KHR3 1735 aa21.35■■□□□ 1.01
AFF3-208ENST00000427118 C5P01031 1676 aa21.35■■□□□ 1.01
AFF3-208ENST00000427118 HMOX1P09601 288 aa21.35■■□□□ 1.01
AFF3-208ENST00000427118 PLEKHO1Q53GL0 409 aaPredicted RBP21.35■■□□□ 1.01
AFF3-208ENST00000427118 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
AFF3-208ENST00000427118 KDM6AO15550 1401 aaPredicted RBP21.35■■□□□ 1.01
AFF3-208ENST00000427118 PLEKHG2Q9H7P9 1386 aa21.35■■□□□ 1.01
AFF3-208ENST00000427118 DIAPH1O60610 1272 aaKnown RBP21.34■■□□□ 1.01
AFF3-208ENST00000427118 ASAP1Q9ULH1 1129 aa21.33■■□□□ 1.01
AFF3-208ENST00000427118 TMOD3Q9NYL9 352 aa21.32■■□□□ 1
AFF3-208ENST00000427118 PNPLA7Q6ZV29 1317 aa21.31■■□□□ 1
AFF3-208ENST00000427118 PTGER2P43116 358 aa21.31■■□□□ 1
AFF3-208ENST00000427118 HNRNPUQ00839 825 aaKnown RBP eCLIP21.31■■□□□ 1
AFF3-208ENST00000427118 AMOTQ4VCS5 1084 aa21.3■■□□□ 1
AFF3-208ENST00000427118 CCDC184Q52MB2 194 aa21.3■■□□□ 1
AFF3-208ENST00000427118 FAM9BQ8IZU0 186 aa21.3■■□□□ 1
AFF3-208ENST00000427118 TFCP2L1Q9NZI6 479 aa21.3■■□□□ 1
AFF3-208ENST00000427118 VIRMAQ69YN4 1812 aaKnown RBP21.29■■□□□ 1
AFF3-208ENST00000427118 SMARCC1Q92922 1105 aaPredicted RBP21.29■■□□□ 1
AFF3-208ENST00000427118 ATG3Q9NT62 314 aa21.29■■□□□ 1
AFF3-208ENST00000427118 PPP1R1BQ9UD71 204 aaPredicted RBP21.29■■□□□ 1
AFF3-208ENST00000427118 GTF3C3Q9Y5Q9 886 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms