RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 VPS8Q8N3P4 1428 aa13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 WASHC2AQ641Q2 1341 aa13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 NUTM2BA6NNL0 878 aaPredicted RBP13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 NUTM2EB1AL46 878 aaPredicted RBP13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 NUTM2AQ8IVF1 878 aaPredicted RBP13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 RUNDC1Q96C34 613 aa13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 APBB1IPQ7Z5R6 666 aaPredicted RBP13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 NUP62CLQ9H1M0 184 aa13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 NAA25Q14CX7 972 aa13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 MICALCLQ6ZW33 695 aa13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 KIF4AO95239 1232 aa13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 KRT85P78386 507 aa13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 BAZ1AQ9NRL2 1556 aaPredicted RBP13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 SPATA24Q86W54 205 aa13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 DRC1Q96MC2 740 aa13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 V9GYY5 206 aaPredicted RBP13.3□□□□□ -0.28
POLR2J4-202ENST00000427076 LUZP1Q86V48 1076 aa13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 PTPN14Q15678 1187 aa13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 CNNM1Q9NRU3 951 aa13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 CHMP4BP1P59074 171 aa13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 GNAI1P63096 354 aa13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 DHX8Q14562 1220 aaKnown RBP13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 SOGA3Q5TF21 947 aa13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 TRIM22Q8IYM9 498 aa13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 CEP57L1Q8IYX8 460 aa13.29□□□□□ -0.28
POLR2J4-202ENST00000427076 K7ELQ4 463 aaPredicted RBP13.28□□□□□ -0.28
POLR2J4-202ENST00000427076 MPHOSPH10O00566 681 aaKnown RBP13.28□□□□□ -0.28
POLR2J4-202ENST00000427076 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
POLR2J4-202ENST00000427076 DESP17661 470 aa13.28□□□□□ -0.28
POLR2J4-202ENST00000427076 KIF4BQ2VIQ3 1234 aa13.28□□□□□ -0.28
POLR2J4-202ENST00000427076 KLHL10Q6JEL2 608 aa13.28□□□□□ -0.28
POLR2J4-202ENST00000427076 COMMD10Q9Y6G5 202 aa13.27□□□□□ -0.28
POLR2J4-202ENST00000427076 SPA17Q15506 151 aa13.27□□□□□ -0.29
POLR2J4-202ENST00000427076 CPLX3Q8WVH0 158 aa13.27□□□□□ -0.29
POLR2J4-202ENST00000427076 CCDC175P0C221 793 aa13.27□□□□□ -0.29
POLR2J4-202ENST00000427076 ZNF397Q8NF99 534 aaPredicted RBP13.27□□□□□ -0.29
POLR2J4-202ENST00000427076 USP5P45974 858 aa13.27□□□□□ -0.29
POLR2J4-202ENST00000427076 PDE1CQ14123 709 aaPredicted RBP13.27□□□□□ -0.29
POLR2J4-202ENST00000427076 MCM2P49736 904 aa13.26□□□□□ -0.29
POLR2J4-202ENST00000427076 ZNF76P36508 570 aa13.26□□□□□ -0.29
POLR2J4-202ENST00000427076 BMS1Q14692 1282 aaKnown RBP13.26□□□□□ -0.29
POLR2J4-202ENST00000427076 SPECC1Q5M775 1068 aa13.26□□□□□ -0.29
POLR2J4-202ENST00000427076 GBP3Q9H0R5 595 aa13.26□□□□□ -0.29
POLR2J4-202ENST00000427076 NOL7Q9UMY1 257 aaKnown RBP13.26□□□□□ -0.29
POLR2J4-202ENST00000427076 GCOM1H8Y6P7 765 aaPredicted RBP13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 MYZAPP0CAP1 466 aa13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 CABP2Q9NPB3 220 aa13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 KIF5CO60282 957 aa13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 CTR9Q6PD62 1173 aa13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 SMTNL1A8MU46 457 aa13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 CCDC158Q5M9N0 1113 aa13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 MAATS1Q7Z4T9 603 aa13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 PDRG1Q9NUG6 133 aa13.25□□□□□ -0.29
POLR2J4-202ENST00000427076 CCDC96Q2M329 555 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 MAP9Q49MG5 647 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 LARP1Q6PKG0 1096 aaKnown RBP13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 UBA5Q9GZZ9 404 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 RABEP2Q9H5N1 569 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 BMP2KQ9NSY1 1161 aaPredicted RBP13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 HLTFQ14527 1009 aaKnown RBP eCLIP13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 ZSCAN30Q86W11 494 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 HYPKQ9NX55 129 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 SMARCC1Q92922 1105 aaPredicted RBP13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 PRDM2Q13029 1718 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 HIP1O00291 1037 aa13.24□□□□□ -0.29
POLR2J4-202ENST00000427076 FKBP4Q02790 459 aaKnown RBP eCLIP13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 JAKMIP1Q96N16 626 aaKnown RBP13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 PAIP2Q9BPZ3 127 aaKnown RBP13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 USP47Q96K76 1375 aa13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 SF3A3Q12874 501 aaKnown RBP eCLIP13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 DIXDC1Q155Q3 683 aa13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 GRIPAP1Q4V328 841 aa13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 ERC1Q8IUD2 1116 aa13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 TTC31Q49AM3 519 aaPredicted RBP13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 RBM27Q9P2N5 1060 aaKnown RBP13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 NOB1Q9ULX3 412 aaKnown RBP13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 GNL3LQ9NVN8 582 aaKnown RBP13.23□□□□□ -0.29
POLR2J4-202ENST00000427076 SFPQP23246 707 aaKnown RBP eCLIP13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 DNAJC21Q5F1R6 531 aaKnown RBP13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 CWC27Q6UX04 472 aaKnown RBP13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 CACNA2D4Q7Z3S7 1137 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 LARP6Q9BRS8 491 aaKnown RBP13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 GGNBP2Q9H3C7 697 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 MAP3K11Q16584 847 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 FERMT3Q86UX7 667 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 HOOK3Q86VS8 718 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 ABTB2Q8N961 1025 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 KIF18AQ8NI77 898 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 CFAP57Q96MR6 1250 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 ISM2Q6H9L7 571 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 HOMER2Q9NSB8 354 aa13.22□□□□□ -0.29
POLR2J4-202ENST00000427076 DAAM2Q86T65 1068 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms