RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 LRRC7Q96NW7 1537 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 PLEKHH2Q8IVE3 1493 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 NPATQ14207 1427 aa3.78□□□□□ -1.8
LINC00407-201ENST00000426509 E9PCH4 1651 aa3.78□□□□□ -1.81
LINC00407-201ENST00000426509 RNF223E7ERA6 249 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 PPEF1O14829 653 aaPredicted RBP3.77□□□□□ -1.81
LINC00407-201ENST00000426509 TSPY4P0CV99 314 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 TSPY10P0CW01 314 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 ATP6V1AP38606 617 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 PDE4DQ08499 809 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 NEUROD2Q15784 382 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 RSPH4AQ5TD94 716 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 FBXO31Q5XUX0 539 aaPredicted RBP3.77□□□□□ -1.81
LINC00407-201ENST00000426509 PARP9Q8IXQ6 854 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 PRKRIP1Q9H875 184 aaPredicted RBP3.77□□□□□ -1.81
LINC00407-201ENST00000426509 FAM217BQ9NTX9 383 aaPredicted RBP3.77□□□□□ -1.81
LINC00407-201ENST00000426509 SLC27A5Q9Y2P5 690 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 A2MP01023 1474 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 PRAG1Q86YV5 1406 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 TRPM1Q7Z4N2 1603 aa3.77□□□□□ -1.81
LINC00407-201ENST00000426509 AGLP35573 1532 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 DUOX2Q9NRD8 1548 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 NR1I2O75469 434 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 S1PR4O95977 384 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 AMHR2Q16671 573 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 BRICD5Q6PL45 260 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 SULF1Q8IWU6 871 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 FAM160A2Q8N612 972 aaPredicted RBP3.76□□□□□ -1.81
LINC00407-201ENST00000426509 HLA-CQ95604 372 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 PRKD2Q9BZL6 878 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 GPCPD1Q9NPB8 672 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 LRP6O75581 1613 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 LAMC1P11047 1609 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 ABCA6Q8N139 1617 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 ERBINQ96RT1 1412 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 CEP170BQ9Y4F5 1589 aaPredicted RBP3.76□□□□□ -1.81
LINC00407-201ENST00000426509 GPRASP1Q5JY77 1395 aa3.76□□□□□ -1.81
LINC00407-201ENST00000426509 PRDM15P57071 1507 aaPredicted RBP3.75□□□□□ -1.81
LINC00407-201ENST00000426509 MYO3AQ8NEV4 1616 aa3.75□□□□□ -1.81
LINC00407-201ENST00000426509 RNF17Q9BXT8 1623 aaKnown RBP3.75□□□□□ -1.81
LINC00407-201ENST00000426509 ADH1BP00325 375 aa3.75□□□□□ -1.81
LINC00407-201ENST00000426509 CLCN1P35523 988 aa3.75□□□□□ -1.81
LINC00407-201ENST00000426509 HNRNPUQ00839 825 aaKnown RBP eCLIP3.75□□□□□ -1.81
LINC00407-201ENST00000426509 TTLL12Q14166 644 aaPredicted RBP3.75□□□□□ -1.81
LINC00407-201ENST00000426509 PLA2G2CQ5R387 149 aa3.75□□□□□ -1.81
LINC00407-201ENST00000426509 EFCAB2Q5VUJ9 269 aa3.75□□□□□ -1.81
LINC00407-201ENST00000426509 RNF19BQ6ZMZ0 732 aa3.75□□□□□ -1.81
LINC00407-201ENST00000426509 LIAT1Q6ZQX7 453 aa3.75□□□□□ -1.81
LINC00407-201ENST00000426509 KDM4CQ9H3R0 1056 aa3.75□□□□□ -1.81
LINC00407-201ENST00000426509 ESF1Q9H501 851 aaKnown RBP3.75□□□□□ -1.81
LINC00407-201ENST00000426509 SALL2Q9Y467 1007 aaPredicted RBP3.75□□□□□ -1.81
LINC00407-201ENST00000426509 STRCP1A6NGW2 1772 aa3.75□□□□□ -1.81
LINC00407-201ENST00000426509 INO80Q9ULG1 1556 aaPredicted RBP3.75□□□□□ -1.81
LINC00407-201ENST00000426509 ROCK2O75116 1388 aaKnown RBP3.75□□□□□ -1.81
LINC00407-201ENST00000426509 DEPDC5O75140 1603 aa3.74□□□□□ -1.81
LINC00407-201ENST00000426509 EIF2AK4Q9P2K8 1649 aaKnown RBP3.74□□□□□ -1.81
LINC00407-201ENST00000426509 CCDC144AA2RUR9 1427 aa3.74□□□□□ -1.81
LINC00407-201ENST00000426509 RTEL1-TNFRSF6BF6WH68 1400 aa3.74□□□□□ -1.81
LINC00407-201ENST00000426509 KDM4AO75164 1064 aa3.74□□□□□ -1.81
LINC00407-201ENST00000426509 SSTR3P32745 418 aaPredicted RBP3.74□□□□□ -1.81
LINC00407-201ENST00000426509 ZNF326Q5BKZ1 582 aaKnown RBP3.74□□□□□ -1.81
LINC00407-201ENST00000426509 GIGYF2Q6Y7W6 1299 aaKnown RBP3.74□□□□□ -1.81
LINC00407-201ENST00000426509 SPSB2Q99619 263 aa3.74□□□□□ -1.81
LINC00407-201ENST00000426509 SLC6A16Q9GZN6 736 aa3.74□□□□□ -1.81
LINC00407-201ENST00000426509 MRS2Q9HD23 443 aa3.74□□□□□ -1.81
LINC00407-201ENST00000426509 REREQ9P2R6 1566 aa3.74□□□□□ -1.81
LINC00407-201ENST00000426509 V9GY48 417 aaPredicted RBP3.74□□□□□ -1.81
LINC00407-201ENST00000426509 MROH1Q8NDA8 1641 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 A2ML1A8K2U0 1454 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 ZNF518AQ6AHZ1 1483 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 MLH3Q9UHC1 1453 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 ZBED9Q6R2W3 1325 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 CFAP74Q9C0B2 1584 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 SETD1BQ9UPS6 1966 aaKnown RBP3.73□□□□□ -1.81
LINC00407-201ENST00000426509 NPHP4O75161 1426 aaPredicted RBP3.73□□□□□ -1.81
LINC00407-201ENST00000426509 FAM135BQ49AJ0 1406 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 ST20-MTHFSA0A0A6YYL1 179 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 LCE2BO14633 110 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 NEFLP07196 543 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 MS4A1P11836 297 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 RXRBP28702 533 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 GGCXP38435 758 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 GUCA2AQ02747 115 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 TRIM67Q6ZTA4 783 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 ANKLE1Q8NAG6 615 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 CARD11Q9BXL7 1154 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 ZNF142P52746 1687 aaPredicted RBP3.73□□□□□ -1.81
LINC00407-201ENST00000426509 TRPM2O94759 1503 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 CLTCL1P53675 1640 aa3.73□□□□□ -1.81
LINC00407-201ENST00000426509 TET3O43151 1660 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 IQGAP1P46940 1657 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 RGS12O14924 1447 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 SMG6Q86US8 1419 aaKnown RBP3.72□□□□□ -1.81
LINC00407-201ENST00000426509 ATP7AQ04656 1500 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 HOXA2O43364 376 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 FMNL1O95466 1100 aaPredicted RBP3.72□□□□□ -1.81
LINC00407-201ENST00000426509 SLC19A1P41440 591 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 NBPF1Q3BBV0 1214 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 SPRYD7Q5W111 196 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 GGT6Q6P531 493 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms