RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 COL5A2P05997 1499 aaPredicted RBP12.32□□□□□ -0.44
TPM3P4-201ENST00000425942 BCL9LQ86UU0 1499 aa12.32□□□□□ -0.44
TPM3P4-201ENST00000425942 COG3Q96JB2 828 aa12.31□□□□□ -0.44
TPM3P4-201ENST00000425942 C8orf37Q96NL8 207 aa12.31□□□□□ -0.44
TPM3P4-201ENST00000425942 POLR3GLQ9BT43 218 aa12.31□□□□□ -0.44
TPM3P4-201ENST00000425942 AFF2P51816 1311 aa12.31□□□□□ -0.44
TPM3P4-201ENST00000425942 PARP4Q9UKK3 1724 aaKnown RBP12.31□□□□□ -0.44
TPM3P4-201ENST00000425942 AATKQ6ZMQ8 1374 aa12.3□□□□□ -0.44
TPM3P4-201ENST00000425942 GLI3P10071 1580 aa12.3□□□□□ -0.44
TPM3P4-201ENST00000425942 SMG6Q86US8 1419 aaKnown RBP12.3□□□□□ -0.44
TPM3P4-201ENST00000425942 THSD7AQ9UPZ6 1657 aa12.3□□□□□ -0.44
TPM3P4-201ENST00000425942 C11orf95C9JLR9 678 aaPredicted RBP12.3□□□□□ -0.44
TPM3P4-201ENST00000425942 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
TPM3P4-201ENST00000425942 GCP02774 474 aa12.3□□□□□ -0.44
TPM3P4-201ENST00000425942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
TPM3P4-201ENST00000425942 PRDM11Q9NQV5 511 aa12.3□□□□□ -0.44
TPM3P4-201ENST00000425942 PEAK1Q9H792 1746 aa12.29□□□□□ -0.44
TPM3P4-201ENST00000425942 RGL2O15211 777 aa12.29□□□□□ -0.44
TPM3P4-201ENST00000425942 DPY19L2Q6NUT2 758 aa12.29□□□□□ -0.44
TPM3P4-201ENST00000425942 NME9Q86XW9 330 aa12.29□□□□□ -0.44
TPM3P4-201ENST00000425942 CABLES1Q8TDN4 633 aa12.29□□□□□ -0.44
TPM3P4-201ENST00000425942 NGLY1Q96IV0 654 aa12.28□□□□□ -0.44
TPM3P4-201ENST00000425942 NUTM2GQ5VZR2 741 aa12.27□□□□□ -0.45
TPM3P4-201ENST00000425942 SLAIN1Q8ND83 568 aa12.27□□□□□ -0.45
TPM3P4-201ENST00000425942 CARD14Q9BXL6 1004 aa12.27□□□□□ -0.45
TPM3P4-201ENST00000425942 PANK3Q9H999 370 aa12.27□□□□□ -0.45
TPM3P4-201ENST00000425942 USP21Q9UK80 565 aa12.27□□□□□ -0.45
TPM3P4-201ENST00000425942 TRPC5Q9UL62 973 aaPredicted RBP12.27□□□□□ -0.45
TPM3P4-201ENST00000425942 KNSTRNQ9Y448 316 aa12.27□□□□□ -0.45
TPM3P4-201ENST00000425942 FYB1O15117 783 aa12.26□□□□□ -0.45
TPM3P4-201ENST00000425942 ARHGEF25Q86VW2 580 aa12.26□□□□□ -0.45
TPM3P4-201ENST00000425942 UNC5CLQ8IV45 518 aa12.26□□□□□ -0.45
TPM3P4-201ENST00000425942 FLT4P35916 1363 aa12.26□□□□□ -0.45
TPM3P4-201ENST00000425942 LRRC37A3O60309 1634 aa12.26□□□□□ -0.45
TPM3P4-201ENST00000425942 CRB1P82279 1406 aa12.25□□□□□ -0.45
TPM3P4-201ENST00000425942 BRWD3Q6RI45 1802 aa12.25□□□□□ -0.45
TPM3P4-201ENST00000425942 RGPD2P0DJD1 1756 aa12.24□□□□□ -0.45
TPM3P4-201ENST00000425942 VPS72Q15906 364 aa12.24□□□□□ -0.45
TPM3P4-201ENST00000425942 L3MBTL3Q96JM7 780 aaPredicted RBP12.24□□□□□ -0.45
TPM3P4-201ENST00000425942 BCL11BQ9C0K0 894 aaPredicted RBP12.24□□□□□ -0.45
TPM3P4-201ENST00000425942 FAM83GA6ND36 823 aa12.23□□□□□ -0.45
TPM3P4-201ENST00000425942 ZC3H6P61129 1189 aaKnown RBP12.23□□□□□ -0.45
TPM3P4-201ENST00000425942 GGNBP2Q9H3C7 697 aa12.23□□□□□ -0.45
TPM3P4-201ENST00000425942 BTG4Q9NY30 223 aa12.23□□□□□ -0.45
TPM3P4-201ENST00000425942 RGS17Q9UGC6 210 aaPredicted RBP12.23□□□□□ -0.45
TPM3P4-201ENST00000425942 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
TPM3P4-201ENST00000425942 RGS12O14924 1447 aa12.22□□□□□ -0.45
TPM3P4-201ENST00000425942 PLEKHG2Q9H7P9 1386 aa12.22□□□□□ -0.45
TPM3P4-201ENST00000425942 ERBB3P21860 1342 aa12.22□□□□□ -0.45
TPM3P4-201ENST00000425942 WDR17Q8IZU2 1322 aa12.22□□□□□ -0.45
TPM3P4-201ENST00000425942 RBM6P78332 1123 aaKnown RBP12.22□□□□□ -0.45
TPM3P4-201ENST00000425942 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
TPM3P4-201ENST00000425942 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.22□□□□□ -0.45
TPM3P4-201ENST00000425942 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
TPM3P4-201ENST00000425942 PKD1L3Q7Z443 1732 aa12.21□□□□□ -0.45
TPM3P4-201ENST00000425942 PER1O15534 1290 aaPredicted RBP12.21□□□□□ -0.45
TPM3P4-201ENST00000425942 INSRP06213 1382 aa12.2□□□□□ -0.46
TPM3P4-201ENST00000425942 MAP3K19Q56UN5 1328 aa12.2□□□□□ -0.46
TPM3P4-201ENST00000425942 CHRNA2Q15822 529 aa12.2□□□□□ -0.46
TPM3P4-201ENST00000425942 LCE2DQ5TA82 110 aaPredicted RBP12.2□□□□□ -0.46
TPM3P4-201ENST00000425942 THRAP3Q9Y2W1 955 aaKnown RBP12.2□□□□□ -0.46
TPM3P4-201ENST00000425942 STK24Q9Y6E0 443 aa12.2□□□□□ -0.46
TPM3P4-201ENST00000425942 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
TPM3P4-201ENST00000425942 NCAPD2Q15021 1401 aa12.2□□□□□ -0.46
TPM3P4-201ENST00000425942 SPATA31A5Q5VU36 1347 aa12.19□□□□□ -0.46
TPM3P4-201ENST00000425942 SPATA31A7Q8IWB4 1347 aa12.19□□□□□ -0.46
TPM3P4-201ENST00000425942 STK25O00506 426 aa12.19□□□□□ -0.46
TPM3P4-201ENST00000425942 RXRBP28702 533 aa12.19□□□□□ -0.46
TPM3P4-201ENST00000425942 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
TPM3P4-201ENST00000425942 IP6K1Q92551 441 aa12.19□□□□□ -0.46
TPM3P4-201ENST00000425942 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
TPM3P4-201ENST00000425942 GJD4Q96KN9 370 aaPredicted RBP12.19□□□□□ -0.46
TPM3P4-201ENST00000425942 QTRT2Q9H974 415 aaKnown RBP12.19□□□□□ -0.46
TPM3P4-201ENST00000425942 SPATA31A1Q5TZJ5 1347 aa12.18□□□□□ -0.46
TPM3P4-201ENST00000425942 SOX12O15370 315 aa12.18□□□□□ -0.46
TPM3P4-201ENST00000425942 HOXC9P31274 260 aa12.18□□□□□ -0.46
TPM3P4-201ENST00000425942 POTEAQ6S8J7 498 aa12.18□□□□□ -0.46
TPM3P4-201ENST00000425942 DISP2A7MBM2 1401 aa12.18□□□□□ -0.46
TPM3P4-201ENST00000425942 AMPHP49418 695 aa12.17□□□□□ -0.46
TPM3P4-201ENST00000425942 MORC1Q86VD1 984 aa12.17□□□□□ -0.46
TPM3P4-201ENST00000425942 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
TPM3P4-201ENST00000425942 TNS2Q63HR2 1409 aa12.17□□□□□ -0.46
TPM3P4-201ENST00000425942 PARD3Q8TEW0 1356 aa12.17□□□□□ -0.46
TPM3P4-201ENST00000425942 RGPD3A6NKT7 1758 aaPredicted RBP12.16□□□□□ -0.46
TPM3P4-201ENST00000425942 RGPD4Q7Z3J3 1758 aa12.16□□□□□ -0.46
TPM3P4-201ENST00000425942 BARGINQ6ZT62 677 aa12.16□□□□□ -0.46
TPM3P4-201ENST00000425942 MS4A4AQ96JQ5 239 aa12.16□□□□□ -0.46
TPM3P4-201ENST00000425942 CDCA7Q9BWT1 371 aaPredicted RBP12.16□□□□□ -0.46
TPM3P4-201ENST00000425942 COL3A1P02461 1466 aaPredicted RBP12.15□□□□□ -0.46
TPM3P4-201ENST00000425942 EP400Q96L91 3159 aa12.15□□□□□ -0.46
TPM3P4-201ENST00000425942 ZBTB7CA1YPR0 619 aa12.15□□□□□ -0.46
TPM3P4-201ENST00000425942 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
TPM3P4-201ENST00000425942 EVA1CP58658 441 aa12.15□□□□□ -0.46
TPM3P4-201ENST00000425942 CARD10Q9BWT7 1032 aa12.15□□□□□ -0.46
TPM3P4-201ENST00000425942 STRN4Q9NRL3 753 aa12.15□□□□□ -0.46
TPM3P4-201ENST00000425942 CCDC9Q9Y3X0 531 aaKnown RBP12.15□□□□□ -0.46
TPM3P4-201ENST00000425942 SBF2Q86WG5 1849 aa12.15□□□□□ -0.46
TPM3P4-201ENST00000425942 TNS1Q9HBL0 1735 aaKnown RBP12.14□□□□□ -0.47
TPM3P4-201ENST00000425942 ONECUT3O60422 494 aaPredicted RBP12.14□□□□□ -0.47
TPM3P4-201ENST00000425942 RRS1Q15050 365 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms