RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 RGPD4Q7Z3J3 1758 aa25.23■■□□□ 1.63
MSH5-207ENST00000425703 RREB1Q92766 1687 aa25.2■■□□□ 1.63
MSH5-207ENST00000425703 KCNQ2O43526 872 aa25.2■■□□□ 1.62
MSH5-207ENST00000425703 NHSQ6T4R5 1651 aa25.2■■□□□ 1.62
MSH5-207ENST00000425703 NPC1L1Q9UHC9 1359 aa25.19■■□□□ 1.62
MSH5-207ENST00000425703 EYA1Q99502 592 aa25.19■■□□□ 1.62
MSH5-207ENST00000425703 EIF4A2Q14240 407 aaKnown RBP25.18■■□□□ 1.62
MSH5-207ENST00000425703 NBPF14Q5TI25 921 aa25.18■■□□□ 1.62
MSH5-207ENST00000425703 ACSBG1Q96GR2 724 aa25.18■■□□□ 1.62
MSH5-207ENST00000425703 PLEKHG2Q9H7P9 1386 aa25.18■■□□□ 1.62
MSH5-207ENST00000425703 PCDH11XQ9BZA7 1347 aa25.16■■□□□ 1.62
MSH5-207ENST00000425703 PCDH11YQ9BZA8 1340 aa25.16■■□□□ 1.62
MSH5-207ENST00000425703 SRCAPQ6ZRS2 3230 aa25.16■■□□□ 1.62
MSH5-207ENST00000425703 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.15■■□□□ 1.623e-7■□□□□ 11.2
MSH5-207ENST00000425703 PSDA5PKW4 1024 aaPredicted RBP25.14■■□□□ 1.62
MSH5-207ENST00000425703 R3HDM1Q15032 1099 aaKnown RBP25.14■■□□□ 1.62
MSH5-207ENST00000425703 PROM2Q8N271 834 aa25.14■■□□□ 1.62
MSH5-207ENST00000425703 NUP188Q5SRE5 1749 aa25.14■■□□□ 1.61
MSH5-207ENST00000425703 SHANK3Q9BYB0 1731 aa25.13■■□□□ 1.61
MSH5-207ENST00000425703 IGSF1Q8N6C5 1336 aa25.12■■□□□ 1.61
MSH5-207ENST00000425703 TXNRD1Q16881 649 aa25.12■■□□□ 1.61
MSH5-207ENST00000425703 SPG7Q9UQ90 795 aa25.11■■□□□ 1.61
MSH5-207ENST00000425703 CYP27B1O15528 508 aa25.09■■□□□ 1.61
MSH5-207ENST00000425703 PRIM1P49642 420 aaKnown RBP25.09■■□□□ 1.61
MSH5-207ENST00000425703 CC2D1BQ5T0F9 858 aaKnown RBP25.09■■□□□ 1.61
MSH5-207ENST00000425703 PKD1L3Q7Z443 1732 aa25.08■■□□□ 1.61
MSH5-207ENST00000425703 MTHFSP49914 203 aa25.06■■□□□ 1.6
MSH5-207ENST00000425703 NKX1-1Q15270 411 aaPredicted RBP25.06■■□□□ 1.6
MSH5-207ENST00000425703 SYTL4Q96C24 671 aaPredicted RBP25.06■■□□□ 1.6
MSH5-207ENST00000425703 BTAF1O14981 1849 aa25.06■■□□□ 1.6
MSH5-207ENST00000425703 IL13P35225 146 aa25.04■■□□□ 1.6
MSH5-207ENST00000425703 SLC27A3Q5K4L6 730 aa25.04■■□□□ 1.6
MSH5-207ENST00000425703 ANO8Q9HCE9 1232 aaPredicted RBP25.03■■□□□ 1.6
MSH5-207ENST00000425703 DOT1LQ8TEK3 1739 aa25.03■■□□□ 1.6
MSH5-207ENST00000425703 LRP5O75197 1615 aa25.02■■□□□ 1.6
MSH5-207ENST00000425703 KDRP35968 1356 aa25.02■■□□□ 1.6
MSH5-207ENST00000425703 IFNL2Q8IZJ0 200 aa25.01■■□□□ 1.59
MSH5-207ENST00000425703 KAT6BQ8WYB5 2073 aa25.01■■□□□ 1.59
MSH5-207ENST00000425703 AMOTQ4VCS5 1084 aa25■■□□□ 1.59
MSH5-207ENST00000425703 STK32BQ9NY57 414 aa25■■□□□ 1.59
MSH5-207ENST00000425703 PHKG2P15735 406 aa24.99■■□□□ 1.59
MSH5-207ENST00000425703 SLC15A2Q16348 729 aa24.99■■□□□ 1.59
MSH5-207ENST00000425703 PLEKHO1Q53GL0 409 aaPredicted RBP24.99■■□□□ 1.59
MSH5-207ENST00000425703 SULT6B1Q6IMI4 303 aa24.97■■□□□ 1.59
MSH5-207ENST00000425703 AEBP1Q8IUX7 1158 aa24.97■■□□□ 1.59
MSH5-207ENST00000425703 LRRC4BQ9NT99 713 aa24.97■■□□□ 1.59
MSH5-207ENST00000425703 DIAPH1O60610 1272 aaKnown RBP24.96■■□□□ 1.59
MSH5-207ENST00000425703 PAPPAQ13219 1627 aa24.95■■□□□ 1.58
MSH5-207ENST00000425703 HSP90AB1P08238 724 aaKnown RBP24.95■■□□□ 1.58
MSH5-207ENST00000425703 HMGB2P26583 209 aaKnown RBP24.95■■□□□ 1.58
MSH5-207ENST00000425703 MPRIPQ6WCQ1 1025 aa24.94■■□□□ 1.58
MSH5-207ENST00000425703 SMARCC1Q92922 1105 aaPredicted RBP24.93■■□□□ 1.58
MSH5-207ENST00000425703 DCAF5Q96JK2 942 aa24.92■■□□□ 1.58
MSH5-207ENST00000425703 COL3A1P02461 1466 aaPredicted RBP24.91■■□□□ 1.58
MSH5-207ENST00000425703 CNGB1Q14028 1251 aaPredicted RBP24.91■■□□□ 1.58
MSH5-207ENST00000425703 PIGBQ92521 554 aa24.91■■□□□ 1.58
MSH5-207ENST00000425703 CCNL1Q9UK58 526 aaPredicted RBP24.91■■□□□ 1.58
MSH5-207ENST00000425703 LY75O60449 1722 aa24.91■■□□□ 1.58
MSH5-207ENST00000425703 TOGARAM1Q9Y4F4 1720 aa24.91■■□□□ 1.58
MSH5-207ENST00000425703 ERVV-2B6SEH9 535 aa24.9■■□□□ 1.58
MSH5-207ENST00000425703 ZNF530Q6P9A1 599 aaPredicted RBP24.9■■□□□ 1.58
MSH5-207ENST00000425703 AKT1S1Q96B36 256 aa24.9■■□□□ 1.58
MSH5-207ENST00000425703 SPON1Q9HCB6 807 aa24.9■■□□□ 1.58
MSH5-207ENST00000425703 TMOD3Q9NYL9 352 aa24.9■■□□□ 1.58
MSH5-207ENST00000425703 PALLDQ8WX93 1383 aa24.9■■□□□ 1.58
MSH5-207ENST00000425703 ZNF827Q17R98 1081 aa24.88■■□□□ 1.57
MSH5-207ENST00000425703 C1orf141Q5JVX7 400 aa24.88■■□□□ 1.57
MSH5-207ENST00000425703 CASZ1Q86V15 1759 aa24.88■■□□□ 1.57
MSH5-207ENST00000425703 CFAP53Q96M91 514 aa24.87■■□□□ 1.57
MSH5-207ENST00000425703 PPP2R1AP30153 589 aa24.86■■□□□ 1.57
MSH5-207ENST00000425703 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
MSH5-207ENST00000425703 ITGB4P16144 1822 aa24.85■■□□□ 1.57
MSH5-207ENST00000425703 HMOX1P09601 288 aa24.85■■□□□ 1.57
MSH5-207ENST00000425703 PDGFDQ9GZP0 370 aaPredicted RBP24.85■■□□□ 1.57
MSH5-207ENST00000425703 KCNQ4P56696 695 aa24.84■■□□□ 1.57
MSH5-207ENST00000425703 KDM6AO15550 1401 aaPredicted RBP24.84■■□□□ 1.57
MSH5-207ENST00000425703 AKAP4Q5JQC9 854 aa24.82■■□□□ 1.56
MSH5-207ENST00000425703 MTFR1LQ9H019 292 aa24.82■■□□□ 1.56
MSH5-207ENST00000425703 TFCP2L1Q9NZI6 479 aa24.82■■□□□ 1.56
MSH5-207ENST00000425703 U2SURPO15042 1029 aaKnown RBP24.81■■□□□ 1.56
MSH5-207ENST00000425703 ZBTB7AO95365 584 aa24.8■■□□□ 1.56
MSH5-207ENST00000425703 CABP4P57796 275 aa24.8■■□□□ 1.56
MSH5-207ENST00000425703 SLC16A10Q8TF71 515 aa24.8■■□□□ 1.56
MSH5-207ENST00000425703 ASAP1Q9ULH1 1129 aa24.8■■□□□ 1.56
MSH5-207ENST00000425703 NUDCQ9Y266 331 aa24.8■■□□□ 1.56
MSH5-207ENST00000425703 LOC102724428A0A0B4J2F2 783 aa24.79■■□□□ 1.56
MSH5-207ENST00000425703 SIK1P57059 783 aa24.79■■□□□ 1.56
MSH5-207ENST00000425703 ATG3Q9NT62 314 aa24.79■■□□□ 1.56
MSH5-207ENST00000425703 PNPLA7Q6ZV29 1317 aa24.79■■□□□ 1.56
MSH5-207ENST00000425703 QSER1Q2KHR3 1735 aa24.78■■□□□ 1.56
MSH5-207ENST00000425703 PTGER2P43116 358 aa24.77■■□□□ 1.56
MSH5-207ENST00000425703 MTHFSDQ2M296 383 aaKnown RBP24.77■■□□□ 1.56
MSH5-207ENST00000425703 PPP1R1BQ9UD71 204 aaPredicted RBP24.76■■□□□ 1.55
MSH5-207ENST00000425703 C5P01031 1676 aa24.75■■□□□ 1.55
MSH5-207ENST00000425703 NFATC2IPQ8NCF5 419 aa24.74■■□□□ 1.55
MSH5-207ENST00000425703 FLAD1Q8NFF5 587 aa24.74■■□□□ 1.55
MSH5-207ENST00000425703 SGIP1Q9BQI5 828 aa24.74■■□□□ 1.55
MSH5-207ENST00000425703 ATF5Q9Y2D1 282 aaPredicted RBP24.74■■□□□ 1.55
MSH5-207ENST00000425703 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
MSH5-207ENST00000425703 RALBP1Q15311 655 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms