RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 RXRBP28702 533 aa9.24□□□□□ -0.93
LSM8-204ENST00000424702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.24□□□□□ -0.934e-7■□□□□ 9.1
LSM8-204ENST00000424702 QTRT2Q9H974 415 aaKnown RBP9.24□□□□□ -0.93
LSM8-204ENST00000424702 MYOM1P52179 1685 aa9.24□□□□□ -0.93
LSM8-204ENST00000424702 SMC4Q9NTJ3 1288 aa9.23□□□□□ -0.93
LSM8-204ENST00000424702 RBM6P78332 1123 aaKnown RBP9.23□□□□□ -0.93
LSM8-204ENST00000424702 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
LSM8-204ENST00000424702 USHBP1Q8N6Y0 703 aa9.23□□□□□ -0.93
LSM8-204ENST00000424702 EYA1Q99502 592 aa9.23□□□□□ -0.93
LSM8-204ENST00000424702 PLIN1O60240 522 aa9.23□□□□□ -0.93
LSM8-204ENST00000424702 ERBB3P21860 1342 aa9.23□□□□□ -0.93
LSM8-204ENST00000424702 IL13P35225 146 aa9.22□□□□□ -0.93
LSM8-204ENST00000424702 AHDC1Q5TGY3 1603 aaPredicted RBP9.22□□□□□ -0.93
LSM8-204ENST00000424702 PHLPP1O60346 1717 aa9.22□□□□□ -0.93
LSM8-204ENST00000424702 DDX58O95786 925 aaKnown RBP9.21□□□□□ -0.93
LSM8-204ENST00000424702 VPS72Q15906 364 aa9.21□□□□□ -0.93
LSM8-204ENST00000424702 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.93
LSM8-204ENST00000424702 DCAF5Q96JK2 942 aa9.21□□□□□ -0.93
LSM8-204ENST00000424702 CRB1P82279 1406 aa9.21□□□□□ -0.93
LSM8-204ENST00000424702 DUSP27Q5VZP5 1158 aa9.21□□□□□ -0.94
LSM8-204ENST00000424702 MAP3K5Q99683 1374 aa9.21□□□□□ -0.94
LSM8-204ENST00000424702 CT47B1P0C2W7 299 aaPredicted RBP9.21□□□□□ -0.94
LSM8-204ENST00000424702 CCDC27Q2M243 656 aa9.21□□□□□ -0.94
LSM8-204ENST00000424702 NCBP3Q53F19 620 aaKnown RBP9.21□□□□□ -0.94
LSM8-204ENST00000424702 KIF20BQ96Q89 1820 aa9.2□□□□□ -0.94
LSM8-204ENST00000424702 ROBO1Q9Y6N7 1651 aa9.2□□□□□ -0.94
LSM8-204ENST00000424702 IGSF1Q8N6C5 1336 aa9.2□□□□□ -0.94
LSM8-204ENST00000424702 EXOC6Q8TAG9 804 aa9.2□□□□□ -0.94
LSM8-204ENST00000424702 BCL2L13Q9BXK5 485 aa9.2□□□□□ -0.94
LSM8-204ENST00000424702 PXDNQ92626 1479 aa9.2□□□□□ -0.94
LSM8-204ENST00000424702 FAM98CQ17RN3 349 aaKnown RBP9.2□□□□□ -0.94
LSM8-204ENST00000424702 LARP1Q6PKG0 1096 aaKnown RBP9.2□□□□□ -0.94
LSM8-204ENST00000424702 IL16Q14005 1332 aa9.19□□□□□ -0.94
LSM8-204ENST00000424702 TAF7Q15545 349 aaPredicted RBP9.19□□□□□ -0.94
LSM8-204ENST00000424702 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
LSM8-204ENST00000424702 RBM42Q9BTD8 480 aaKnown RBP9.19□□□□□ -0.94
LSM8-204ENST00000424702 EXOSC9Q06265 439 aaKnown RBP9.19□□□□□ -0.94
LSM8-204ENST00000424702 TSR2Q969E8 191 aaKnown RBP9.19□□□□□ -0.94
LSM8-204ENST00000424702 CRBNQ96SW2 442 aa9.19□□□□□ -0.94
LSM8-204ENST00000424702 FAM83GA6ND36 823 aa9.19□□□□□ -0.94
LSM8-204ENST00000424702 ELL2O00472 640 aaPredicted RBP9.19□□□□□ -0.94
LSM8-204ENST00000424702 STARD3NLO95772 234 aa9.19□□□□□ -0.94
LSM8-204ENST00000424702 IFT57Q9NWB7 429 aa9.19□□□□□ -0.94
LSM8-204ENST00000424702 BABAM1Q9NWV8 329 aa9.19□□□□□ -0.94
LSM8-204ENST00000424702 ZNF330Q9Y3S2 320 aaPredicted RBP9.19□□□□□ -0.94
LSM8-204ENST00000424702 SSH2Q76I76 1423 aa9.19□□□□□ -0.94
LSM8-204ENST00000424702 DCAF8L1A6NGE4 600 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 BTBD11A6QL63 1104 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 HSP90B1P14625 803 aaKnown RBP9.18□□□□□ -0.94
LSM8-204ENST00000424702 ZKSCAN2Q63HK3 967 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 FAM196AQ6ZSG2 479 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 PLEKHG2Q9H7P9 1386 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 NBPF6Q5VWK0 638 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 CLUAP1Q96AJ1 413 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 NBPF4Q96M43 638 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 FMNL2Q96PY5 1086 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 MON2Q7Z3U7 1717 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 CD163L1Q9NR16 1453 aa9.18□□□□□ -0.94
LSM8-204ENST00000424702 ABCC6O95255 1503 aa9.17□□□□□ -0.94
LSM8-204ENST00000424702 NEXNQ0ZGT2 675 aa9.17□□□□□ -0.94
LSM8-204ENST00000424702 CCDC30Q5VVM6 783 aa9.17□□□□□ -0.94
LSM8-204ENST00000424702 TOPAZ1Q8N9V7 1692 aa9.17□□□□□ -0.94
LSM8-204ENST00000424702 SOS1Q07889 1333 aaPredicted RBP9.17□□□□□ -0.94
LSM8-204ENST00000424702 BAG6P46379 1132 aa9.17□□□□□ -0.94
LSM8-204ENST00000424702 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
LSM8-204ENST00000424702 NCAPD2Q15021 1401 aa9.17□□□□□ -0.94
LSM8-204ENST00000424702 OVOS2A0A0G2JMS6 1433 aa9.17□□□□□ -0.94
LSM8-204ENST00000424702 BARGINQ6ZT62 677 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 ERICH6Q7L0X2 663 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 AEBP1Q8IUX7 1158 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 API5Q9BZZ5 524 aaKnown RBP9.16□□□□□ -0.94
LSM8-204ENST00000424702 KIF16BQ96L93 1317 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 MED1Q15648 1581 aaPredicted RBP9.16□□□□□ -0.94
LSM8-204ENST00000424702 ERVV-2B6SEH9 535 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 MSH5O43196 834 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 BCAR3O75815 825 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 KIF6Q6ZMV9 814 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 KRT27Q7Z3Y8 459 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 TMX4Q9H1E5 349 aaPredicted RBP9.16□□□□□ -0.94
LSM8-204ENST00000424702 AKAP12Q02952 1782 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 ITPRIPQ8IWB1 547 aa9.16□□□□□ -0.94
LSM8-204ENST00000424702 THUMPD2Q9BTF0 503 aaKnown RBP9.16□□□□□ -0.94
LSM8-204ENST00000424702 A0A087WZG4 1122 aa9.15□□□□□ -0.94
LSM8-204ENST00000424702 MPRIPQ6WCQ1 1025 aa9.15□□□□□ -0.94
LSM8-204ENST00000424702 FANCIQ9NVI1 1328 aa9.15□□□□□ -0.94
LSM8-204ENST00000424702 SLIT3O75094 1523 aa9.15□□□□□ -0.94
LSM8-204ENST00000424702 NBPF14Q5TI25 921 aa9.15□□□□□ -0.94
LSM8-204ENST00000424702 SEPT12Q8IYM1 358 aa9.15□□□□□ -0.94
LSM8-204ENST00000424702 PHACTR3Q96KR7 559 aa9.15□□□□□ -0.94
LSM8-204ENST00000424702 COG6Q9Y2V7 657 aa9.15□□□□□ -0.95
LSM8-204ENST00000424702 SPATA31A5Q5VU36 1347 aa9.14□□□□□ -0.95
LSM8-204ENST00000424702 SPATA31A7Q8IWB4 1347 aa9.14□□□□□ -0.95
LSM8-204ENST00000424702 RNMTO43148 476 aaKnown RBP9.14□□□□□ -0.95
LSM8-204ENST00000424702 EIF2S2P20042 333 aaKnown RBP9.14□□□□□ -0.95
LSM8-204ENST00000424702 GTF2E1P29083 439 aaPredicted RBP9.14□□□□□ -0.95
LSM8-204ENST00000424702 PDE3AQ14432 1141 aa9.14□□□□□ -0.95
LSM8-204ENST00000424702 MTHFSDQ2M296 383 aaKnown RBP9.14□□□□□ -0.95
LSM8-204ENST00000424702 SPATA31A1Q5TZJ5 1347 aa9.14□□□□□ -0.95
LSM8-204ENST00000424702 TWISTNBQ3B726 338 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms