RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
TOP3B-203ENST00000424393 TRIM37O94972 964 aa14.83□□□□□ -0.04
TOP3B-203ENST00000424393 DDX10Q13206 875 aaKnown RBP14.83□□□□□ -0.04
TOP3B-203ENST00000424393 IGSF1Q8N6C5 1336 aa14.83□□□□□ -0.04
TOP3B-203ENST00000424393 COL3A1P02461 1466 aaPredicted RBP14.82□□□□□ -0.04
TOP3B-203ENST00000424393 TATP17735 454 aaPredicted RBP14.82□□□□□ -0.04
TOP3B-203ENST00000424393 RAPGEF4Q8WZA2 1011 aa14.82□□□□□ -0.04
TOP3B-203ENST00000424393 NHSQ6T4R5 1651 aa14.81□□□□□ -0.04
TOP3B-203ENST00000424393 IL13P35225 146 aa14.81□□□□□ -0.04
TOP3B-203ENST00000424393 ZCRB1Q8TBF4 217 aaKnown RBP14.81□□□□□ -0.04
TOP3B-203ENST00000424393 YY1P25490 414 aa14.8□□□□□ -0.04
TOP3B-203ENST00000424393 EZH2Q15910 746 aaKnown RBP14.8□□□□□ -0.04
TOP3B-203ENST00000424393 PTF1AQ7RTS3 328 aa14.8□□□□□ -0.04
TOP3B-203ENST00000424393 DDX54Q8TDD1 881 aaKnown RBP14.8□□□□□ -0.04
TOP3B-203ENST00000424393 PPP1R1BQ9UD71 204 aaPredicted RBP14.8□□□□□ -0.04
TOP3B-203ENST00000424393 DOT1LQ8TEK3 1739 aa14.8□□□□□ -0.04
TOP3B-203ENST00000424393 PPP2R1AP30153 589 aa14.79□□□□□ -0.04
TOP3B-203ENST00000424393 PARD3Q8TEW0 1356 aa14.79□□□□□ -0.04
TOP3B-203ENST00000424393 APBA3O96018 575 aa14.78□□□□□ -0.04
TOP3B-203ENST00000424393 NBPF14Q5TI25 921 aa14.77□□□□□ -0.05
TOP3B-203ENST00000424393 AEBP1Q8IUX7 1158 aa14.77□□□□□ -0.05
TOP3B-203ENST00000424393 ACSBG1Q96GR2 724 aa14.77□□□□□ -0.05
TOP3B-203ENST00000424393 RGPD3A6NKT7 1758 aaPredicted RBP14.77□□□□□ -0.05
TOP3B-203ENST00000424393 RGPD4Q7Z3J3 1758 aa14.77□□□□□ -0.05
TOP3B-203ENST00000424393 RREB1Q92766 1687 aa14.77□□□□□ -0.05
TOP3B-203ENST00000424393 KDRP35968 1356 aa14.76□□□□□ -0.05
TOP3B-203ENST00000424393 PCDH11XQ9BZA7 1347 aa14.76□□□□□ -0.05
TOP3B-203ENST00000424393 PCDH11YQ9BZA8 1340 aa14.76□□□□□ -0.05
TOP3B-203ENST00000424393 KCNQ2O43526 872 aa14.76□□□□□ -0.05
TOP3B-203ENST00000424393 DIAPH1O60610 1272 aaKnown RBP14.76□□□□□ -0.05
TOP3B-203ENST00000424393 BCL11BQ9C0K0 894 aaPredicted RBP14.76□□□□□ -0.05
TOP3B-203ENST00000424393 BTAF1O14981 1849 aa14.76□□□□□ -0.05
TOP3B-203ENST00000424393 TOGARAM1Q9Y4F4 1720 aa14.75□□□□□ -0.05
TOP3B-203ENST00000424393 PLEKHG2Q9H7P9 1386 aa14.75□□□□□ -0.05
TOP3B-203ENST00000424393 ZNF316A6NFI3 1004 aaPredicted RBP14.75□□□□□ -0.05
TOP3B-203ENST00000424393 CYP27B1O15528 508 aa14.75□□□□□ -0.05
TOP3B-203ENST00000424393 CAMKK2Q96RR4 588 aa14.75□□□□□ -0.05
TOP3B-203ENST00000424393 SULT6B1Q6IMI4 303 aa14.74□□□□□ -0.05
TOP3B-203ENST00000424393 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.74□□□□□ -0.053e-7■■□□□ 13.4
TOP3B-203ENST00000424393 SPG7Q9UQ90 795 aa14.74□□□□□ -0.05
TOP3B-203ENST00000424393 NUP188Q5SRE5 1749 aa14.74□□□□□ -0.05
TOP3B-203ENST00000424393 KAT6BQ8WYB5 2073 aa14.72□□□□□ -0.05
TOP3B-203ENST00000424393 HMOX1P09601 288 aa14.72□□□□□ -0.05
TOP3B-203ENST00000424393 ITGB4P16144 1822 aa14.71□□□□□ -0.05
TOP3B-203ENST00000424393 PLSCR1O15162 318 aa14.71□□□□□ -0.05
TOP3B-203ENST00000424393 CFAP53Q96M91 514 aa14.71□□□□□ -0.05
TOP3B-203ENST00000424393 PHKG2P15735 406 aa14.7□□□□□ -0.06
TOP3B-203ENST00000424393 PRIM1P49642 420 aaKnown RBP14.7□□□□□ -0.06
TOP3B-203ENST00000424393 NKX1-1Q15270 411 aaPredicted RBP14.7□□□□□ -0.06
TOP3B-203ENST00000424393 RALBP1Q15311 655 aa14.7□□□□□ -0.06
TOP3B-203ENST00000424393 PLEKHO1Q53GL0 409 aaPredicted RBP14.7□□□□□ -0.06
TOP3B-203ENST00000424393 U2SURPO15042 1029 aaKnown RBP14.69□□□□□ -0.06
TOP3B-203ENST00000424393 IFNL2Q8IZJ0 200 aa14.69□□□□□ -0.06
TOP3B-203ENST00000424393 SPON1Q9HCB6 807 aa14.69□□□□□ -0.06
TOP3B-203ENST00000424393 AMOTQ4VCS5 1084 aa14.68□□□□□ -0.06
TOP3B-203ENST00000424393 PROM2Q8N271 834 aa14.68□□□□□ -0.06
TOP3B-203ENST00000424393 SYTL4Q96C24 671 aaPredicted RBP14.68□□□□□ -0.06
TOP3B-203ENST00000424393 LY75O60449 1722 aa14.67□□□□□ -0.06
TOP3B-203ENST00000424393 ZNF530Q6P9A1 599 aaPredicted RBP14.67□□□□□ -0.06
TOP3B-203ENST00000424393 KDM6AO15550 1401 aaPredicted RBP14.66□□□□□ -0.06
TOP3B-203ENST00000424393 MYBBP1AQ9BQG0 1328 aaKnown RBP14.66□□□□□ -0.06
TOP3B-203ENST00000424393 VIRMAQ69YN4 1812 aaKnown RBP14.65□□□□□ -0.06
TOP3B-203ENST00000424393 TXNRD1Q16881 649 aa14.65□□□□□ -0.06
TOP3B-203ENST00000424393 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
TOP3B-203ENST00000424393 PRKRIP1Q9H875 184 aaPredicted RBP14.65□□□□□ -0.06
TOP3B-203ENST00000424393 NUDCQ9Y266 331 aa14.65□□□□□ -0.06
TOP3B-203ENST00000424393 SCN11AQ9UI33 1791 aa14.65□□□□□ -0.06
TOP3B-203ENST00000424393 PAPPAQ13219 1627 aa14.64□□□□□ -0.07
TOP3B-203ENST00000424393 MTHFSDQ2M296 383 aaKnown RBP14.64□□□□□ -0.07
TOP3B-203ENST00000424393 MPRIPQ6WCQ1 1025 aa14.64□□□□□ -0.07
TOP3B-203ENST00000424393 ADAMTS7Q9UKP4 1686 aa14.64□□□□□ -0.07
TOP3B-203ENST00000424393 HSP90AB1P08238 724 aaKnown RBP14.63□□□□□ -0.07
TOP3B-203ENST00000424393 U2AF1L5P0DN76 240 aaPredicted RBP14.63□□□□□ -0.07
TOP3B-203ENST00000424393 U2AF1Q01081 240 aaKnown RBP eCLIP14.63□□□□□ -0.07
TOP3B-203ENST00000424393 C1orf141Q5JVX7 400 aa14.63□□□□□ -0.07
TOP3B-203ENST00000424393 DCAF5Q96JK2 942 aa14.63□□□□□ -0.07
TOP3B-203ENST00000424393 PRKAR2BP31323 418 aa14.62□□□□□ -0.07
TOP3B-203ENST00000424393 AKAP4Q5JQC9 854 aa14.62□□□□□ -0.07
TOP3B-203ENST00000424393 PIGBQ92521 554 aa14.62□□□□□ -0.07
TOP3B-203ENST00000424393 PHACTR3Q96KR7 559 aa14.61□□□□□ -0.07
TOP3B-203ENST00000424393 ANO8Q9HCE9 1232 aaPredicted RBP14.61□□□□□ -0.07
TOP3B-203ENST00000424393 LRRC4BQ9NT99 713 aa14.61□□□□□ -0.07
TOP3B-203ENST00000424393 TMOD3Q9NYL9 352 aa14.61□□□□□ -0.07
TOP3B-203ENST00000424393 ERVV-2B6SEH9 535 aa14.6□□□□□ -0.07
TOP3B-203ENST00000424393 FCHSD2O94868 740 aa14.6□□□□□ -0.07
TOP3B-203ENST00000424393 PALLDQ8WX93 1383 aa14.6□□□□□ -0.07
TOP3B-203ENST00000424393 MRC1P22897 1456 aa14.59□□□□□ -0.07
TOP3B-203ENST00000424393 LGR6Q9HBX8 967 aa14.59□□□□□ -0.07
TOP3B-203ENST00000424393 TAF1LQ8IZX4 1826 aa14.58□□□□□ -0.08
TOP3B-203ENST00000424393 RNMTO43148 476 aaKnown RBP14.58□□□□□ -0.08
TOP3B-203ENST00000424393 KCNQ4P56696 695 aa14.58□□□□□ -0.08
TOP3B-203ENST00000424393 SLC27A3Q5K4L6 730 aa14.58□□□□□ -0.08
TOP3B-203ENST00000424393 GAS2L2Q8NHY3 880 aa14.58□□□□□ -0.08
TOP3B-203ENST00000424393 C5P01031 1676 aa14.58□□□□□ -0.08
TOP3B-203ENST00000424393 MAP3K5Q99683 1374 aa14.58□□□□□ -0.08
TOP3B-203ENST00000424393 CABP4P57796 275 aa14.57□□□□□ -0.08
TOP3B-203ENST00000424393 ATG3Q9NT62 314 aa14.57□□□□□ -0.08
TOP3B-203ENST00000424393 CCNL1Q9UK58 526 aaPredicted RBP14.57□□□□□ -0.08
TOP3B-203ENST00000424393 ASAP1Q9ULH1 1129 aa14.57□□□□□ -0.08
TOP3B-203ENST00000424393 CASZ1Q86V15 1759 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms