RNA–Protein interactions for RNA: ENST00000423351.5

PBRM1-211, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-211ENST00000423351 ABCA3Q99758 1704 aa6.58□□□□□ -1.36
PBRM1-211ENST00000423351 SOX12O15370 315 aa6.58□□□□□ -1.36
PBRM1-211ENST00000423351 NUTM2GQ5VZR2 741 aa6.58□□□□□ -1.36
PBRM1-211ENST00000423351 SSH1Q8WYL5 1049 aa6.58□□□□□ -1.36
PBRM1-211ENST00000423351 MAP3K5Q99683 1374 aa6.58□□□□□ -1.36
PBRM1-211ENST00000423351 VAMP4O75379 141 aa6.58□□□□□ -1.36
PBRM1-211ENST00000423351 MTHFSDQ2M296 383 aaKnown RBP6.58□□□□□ -1.36
PBRM1-211ENST00000423351 CPDO75976 1380 aa6.57□□□□□ -1.36
PBRM1-211ENST00000423351 TCERG1O14776 1098 aaKnown RBP6.57□□□□□ -1.36
PBRM1-211ENST00000423351 CLUAP1Q96AJ1 413 aa6.57□□□□□ -1.36
PBRM1-211ENST00000423351 KDM3BQ7LBC6 1761 aa6.57□□□□□ -1.36
PBRM1-211ENST00000423351 MVPQ14764 893 aaKnown RBP6.57□□□□□ -1.36
PBRM1-211ENST00000423351 ATF7IPQ6VMQ6 1270 aa6.57□□□□□ -1.36
PBRM1-211ENST00000423351 DZIP1LQ8IYY4 767 aaKnown RBP6.57□□□□□ -1.36
PBRM1-211ENST00000423351 RTF1Q92541 710 aaKnown RBP6.57□□□□□ -1.36
PBRM1-211ENST00000423351 SPATA31A3Q5VYP0 1347 aa6.57□□□□□ -1.36
PBRM1-211ENST00000423351 N4BP2Q86UW6 1770 aaPredicted RBP6.57□□□□□ -1.36
PBRM1-211ENST00000423351 FRAT1Q92837 279 aaPredicted RBP6.57□□□□□ -1.36
PBRM1-211ENST00000423351 THUMPD2Q9BTF0 503 aaKnown RBP6.57□□□□□ -1.36
PBRM1-211ENST00000423351 GNAT3A8MTJ3 354 aa6.56□□□□□ -1.36
PBRM1-211ENST00000423351 MRPL50Q8N5N7 158 aaKnown RBP6.56□□□□□ -1.36
PBRM1-211ENST00000423351 PANK1Q8TE04 598 aa6.56□□□□□ -1.36
PBRM1-211ENST00000423351 CHMP4BQ9H444 224 aaKnown RBP6.56□□□□□ -1.36
PBRM1-211ENST00000423351 SIPA1L3O60292 1781 aaPredicted RBP6.56□□□□□ -1.36
PBRM1-211ENST00000423351 FAM83GA6ND36 823 aa6.56□□□□□ -1.36
PBRM1-211ENST00000423351 TWISTNBQ3B726 338 aaPredicted RBP6.56□□□□□ -1.36
PBRM1-211ENST00000423351 DDX19BQ9UMR2 479 aa6.56□□□□□ -1.36
PBRM1-211ENST00000423351 CEMIPQ8WUJ3 1361 aa6.56□□□□□ -1.36
PBRM1-211ENST00000423351 TRIM27P14373 513 aa6.56□□□□□ -1.36
PBRM1-211ENST00000423351 COG6Q9Y2V7 657 aa6.56□□□□□ -1.36
PBRM1-211ENST00000423351 PKD1L3Q7Z443 1732 aa6.56□□□□□ -1.36
PBRM1-211ENST00000423351 RLBP1P12271 317 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 AMOTQ4VCS5 1084 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 FTSJ3Q8IY81 847 aaKnown RBP6.55□□□□□ -1.36
PBRM1-211ENST00000423351 LAS1LQ9Y4W2 734 aaKnown RBP6.55□□□□□ -1.36
PBRM1-211ENST00000423351 SOS2Q07890 1332 aaPredicted RBP6.55□□□□□ -1.36
PBRM1-211ENST00000423351 BRINP3Q76B58 766 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 NOB1Q9ULX3 412 aaKnown RBP6.55□□□□□ -1.36
PBRM1-211ENST00000423351 NBPF6Q5VWK0 638 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 NBPF4Q96M43 638 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 BCL2L13Q9BXK5 485 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 ZNF335Q9H4Z2 1342 aaPredicted RBP6.55□□□□□ -1.36
PBRM1-211ENST00000423351 XPCQ01831 940 aaPredicted RBP6.55□□□□□ -1.36
PBRM1-211ENST00000423351 DCTN1Q14203 1278 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 MCM10Q7L590 875 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 ANKRD24Q8TF21 1146 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 ABCC4O15439 1325 aa6.55□□□□□ -1.36
PBRM1-211ENST00000423351 PARP4Q9UKK3 1724 aaKnown RBP6.54□□□□□ -1.36
PBRM1-211ENST00000423351 C8orf58Q8NAV2 365 aa6.54□□□□□ -1.36
PBRM1-211ENST00000423351 API5Q9BZZ5 524 aaKnown RBP6.54□□□□□ -1.36
PBRM1-211ENST00000423351 ERBB3P21860 1342 aa6.54□□□□□ -1.36
PBRM1-211ENST00000423351 PLEKHO1Q53GL0 409 aaPredicted RBP6.54□□□□□ -1.36
PBRM1-211ENST00000423351 TSPYL6Q8N831 410 aa6.54□□□□□ -1.36
PBRM1-211ENST00000423351 RTN4Q9NQC3 1192 aaKnown RBP6.54□□□□□ -1.36
PBRM1-211ENST00000423351 SCN11AQ9UI33 1791 aa6.54□□□□□ -1.36
PBRM1-211ENST00000423351 RBM19Q9Y4C8 960 aaKnown RBP6.54□□□□□ -1.36
PBRM1-211ENST00000423351 KCNA4P22459 653 aa6.54□□□□□ -1.36
PBRM1-211ENST00000423351 SLAIN2Q9P270 581 aa6.54□□□□□ -1.36
PBRM1-211ENST00000423351 AHDC1Q5TGY3 1603 aaPredicted RBP6.54□□□□□ -1.36
PBRM1-211ENST00000423351 COL22A1Q8NFW1 1626 aaPredicted RBP6.54□□□□□ -1.36
PBRM1-211ENST00000423351 PTPRCP08575 1304 aa6.53□□□□□ -1.36
PBRM1-211ENST00000423351 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
PBRM1-211ENST00000423351 LTV1Q96GA3 475 aaPredicted RBP6.53□□□□□ -1.36
PBRM1-211ENST00000423351 CHMP4AQ9BY43 222 aa6.53□□□□□ -1.36
PBRM1-211ENST00000423351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.53□□□□□ -1.367e-7■■■■□ 21.4
PBRM1-211ENST00000423351 HDAC1Q13547 482 aaPredicted RBP6.53□□□□□ -1.36
PBRM1-211ENST00000423351 RWDD1Q9H446 243 aaPredicted RBP6.53□□□□□ -1.36
PBRM1-211ENST00000423351 TSPYL4Q9UJ04 414 aa6.53□□□□□ -1.36
PBRM1-211ENST00000423351 TNNQ9UQP3 1299 aa6.53□□□□□ -1.36
PBRM1-211ENST00000423351 TAF7Q15545 349 aaPredicted RBP6.53□□□□□ -1.36
PBRM1-211ENST00000423351 HOXB7P09629 217 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 LMOD2Q6P5Q4 547 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 IL17REQ8NFR9 667 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 ZBTB40Q9NUA8 1239 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 RGS12O14924 1447 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 LTBP4Q8N2S1 1624 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 MRC1P22897 1456 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 TMEM57Q8N5G2 664 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 PXDNLA1KZ92 1463 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 AXIN2Q9Y2T1 843 aa6.52□□□□□ -1.37
PBRM1-211ENST00000423351 IGHDP01880 384 aa6.51□□□□□ -1.37
PBRM1-211ENST00000423351 ITPRIPQ8IWB1 547 aa6.51□□□□□ -1.37
PBRM1-211ENST00000423351 USHBP1Q8N6Y0 703 aa6.51□□□□□ -1.37
PBRM1-211ENST00000423351 PCDHB15Q9Y5E8 787 aa6.51□□□□□ -1.37
PBRM1-211ENST00000423351 INTS3Q68E01 1043 aaKnown RBP6.51□□□□□ -1.37
PBRM1-211ENST00000423351 LRRC59Q96AG4 307 aaKnown RBP6.51□□□□□ -1.37
PBRM1-211ENST00000423351 ZNF530Q6P9A1 599 aaPredicted RBP6.5□□□□□ -1.37
PBRM1-211ENST00000423351 ROBO1Q9Y6N7 1651 aa6.5□□□□□ -1.37
PBRM1-211ENST00000423351 C1orf141Q5JVX7 400 aa6.5□□□□□ -1.37
PBRM1-211ENST00000423351 DDX17Q92841 729 aaKnown RBP6.5□□□□□ -1.37
PBRM1-211ENST00000423351 COL14A1Q05707 1796 aaKnown RBP6.5□□□□□ -1.37
PBRM1-211ENST00000423351 ZBTB7BO15156 539 aaPredicted RBP6.5□□□□□ -1.37
PBRM1-211ENST00000423351 ZC3H6P61129 1189 aaKnown RBP6.5□□□□□ -1.37
PBRM1-211ENST00000423351 CCDC30Q5VVM6 783 aa6.5□□□□□ -1.37
PBRM1-211ENST00000423351 ZBTB7CA1YPR0 619 aa6.5□□□□□ -1.37
PBRM1-211ENST00000423351 RNMTO43148 476 aaKnown RBP6.5□□□□□ -1.37
PBRM1-211ENST00000423351 COL5A2P05997 1499 aaPredicted RBP6.49□□□□□ -1.37
PBRM1-211ENST00000423351 HEG1Q9ULI3 1381 aa6.49□□□□□ -1.37
PBRM1-211ENST00000423351 MEGF6O75095 1541 aa6.49□□□□□ -1.37
PBRM1-211ENST00000423351 PLCH1Q4KWH8 1693 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms