RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 EYA1Q99502 592 aa18.26■□□□□ 0.51
SHISA9-201ENST00000423335 SRCIN1Q9C0H9 1055 aa18.26■□□□□ 0.51
SHISA9-201ENST00000423335 ABCC1P33527 1531 aa18.26■□□□□ 0.51
SHISA9-201ENST00000423335 CCDC27Q2M243 656 aa18.26■□□□□ 0.51
SHISA9-201ENST00000423335 PLA2R1Q13018 1463 aa18.26■□□□□ 0.51
SHISA9-201ENST00000423335 DNAJC5Q9H3Z4 198 aa18.26■□□□□ 0.51
SHISA9-201ENST00000423335 SPATA31E1Q6ZUB1 1445 aa18.25■□□□□ 0.51
SHISA9-201ENST00000423335 NPHP3Q7Z494 1330 aa18.25■□□□□ 0.51
SHISA9-201ENST00000423335 SMARCA5O60264 1052 aaPredicted RBP18.25■□□□□ 0.51
SHISA9-201ENST00000423335 MAP4K4O95819 1239 aaPredicted RBP18.24■□□□□ 0.51
SHISA9-201ENST00000423335 GNAI3P08754 354 aa18.24■□□□□ 0.51
SHISA9-201ENST00000423335 RABEP1Q15276 862 aa18.24■□□□□ 0.51
SHISA9-201ENST00000423335 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
SHISA9-201ENST00000423335 TNPO1Q92973 898 aaKnown RBP18.24■□□□□ 0.51
SHISA9-201ENST00000423335 SSFA2P28290 1259 aa18.23■□□□□ 0.51
SHISA9-201ENST00000423335 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
SHISA9-201ENST00000423335 NRDCO43847 1150 aa18.23■□□□□ 0.51
SHISA9-201ENST00000423335 GNAI2P04899 355 aa18.23■□□□□ 0.51
SHISA9-201ENST00000423335 TSPYL6Q8N831 410 aa18.23■□□□□ 0.51
SHISA9-201ENST00000423335 C8orf37Q96NL8 207 aa18.23■□□□□ 0.51
SHISA9-201ENST00000423335 PPP1R1BQ9UD71 204 aaPredicted RBP18.23■□□□□ 0.51
SHISA9-201ENST00000423335 ARHGEF5Q12774 1597 aa18.22■□□□□ 0.51
SHISA9-201ENST00000423335 SRGAP3O43295 1099 aa18.22■□□□□ 0.51
SHISA9-201ENST00000423335 CT47B1P0C2W7 299 aaPredicted RBP18.22■□□□□ 0.51
SHISA9-201ENST00000423335 ACSBG1Q96GR2 724 aa18.22■□□□□ 0.51
SHISA9-201ENST00000423335 APPP05067 770 aa18.22■□□□□ 0.51
SHISA9-201ENST00000423335 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
SHISA9-201ENST00000423335 FBXW7Q969H0 707 aa18.22■□□□□ 0.51
SHISA9-201ENST00000423335 VPS37DQ86XT2 251 aa18.21■□□□□ 0.51
SHISA9-201ENST00000423335 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
SHISA9-201ENST00000423335 TMOD3Q9NYL9 352 aa18.21■□□□□ 0.51
SHISA9-201ENST00000423335 SMC3Q9UQE7 1217 aa18.21■□□□□ 0.51
SHISA9-201ENST00000423335 ASXL1Q8IXJ9 1541 aa18.21■□□□□ 0.51
SHISA9-201ENST00000423335 XRCC6P12956 609 aaKnown RBP eCLIP18.2■□□□□ 0.5
SHISA9-201ENST00000423335 FOSBP53539 338 aa18.2■□□□□ 0.5
SHISA9-201ENST00000423335 CLASRPQ8N2M8 674 aaKnown RBP18.2■□□□□ 0.5
SHISA9-201ENST00000423335 ZBTB3Q9H5J0 574 aa18.2■□□□□ 0.5
SHISA9-201ENST00000423335 MLH3Q9UHC1 1453 aa18.2■□□□□ 0.5
SHISA9-201ENST00000423335 EXOC5O00471 708 aa18.2■□□□□ 0.5
SHISA9-201ENST00000423335 GNL2Q13823 731 aaKnown RBP18.2■□□□□ 0.5
SHISA9-201ENST00000423335 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
SHISA9-201ENST00000423335 ATP5J2-PTCD1G3V325 749 aa18.2■□□□□ 0.5
SHISA9-201ENST00000423335 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
SHISA9-201ENST00000423335 FIBPO43427 364 aa18.19■□□□□ 0.5
SHISA9-201ENST00000423335 UPF3BQ9BZI7 483 aaKnown RBP18.19■□□□□ 0.5
SHISA9-201ENST00000423335 ZNF592Q92610 1267 aa18.19■□□□□ 0.5
SHISA9-201ENST00000423335 ATP6V1DQ9Y5K8 247 aa18.19■□□□□ 0.5
SHISA9-201ENST00000423335 PREX2Q70Z35 1606 aa18.18■□□□□ 0.5
SHISA9-201ENST00000423335 GPTP24298 496 aa18.18■□□□□ 0.5
SHISA9-201ENST00000423335 KIF6Q6ZMV9 814 aa18.18■□□□□ 0.5
SHISA9-201ENST00000423335 CSPP1Q1MSJ5 1256 aa18.18■□□□□ 0.5
SHISA9-201ENST00000423335 DNAJC2Q99543 621 aaKnown RBP18.18■□□□□ 0.5
SHISA9-201ENST00000423335 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
SHISA9-201ENST00000423335 H3BQV1 296 aa18.17■□□□□ 0.5
SHISA9-201ENST00000423335 ZKSCAN1P17029 563 aaPredicted RBP18.17■□□□□ 0.5
SHISA9-201ENST00000423335 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
SHISA9-201ENST00000423335 TTC21AQ8NDW8 1320 aa18.17■□□□□ 0.5
SHISA9-201ENST00000423335 TOM1O60784 492 aa18.17■□□□□ 0.5
SHISA9-201ENST00000423335 AMOTQ4VCS5 1084 aa18.17■□□□□ 0.5
SHISA9-201ENST00000423335 PRDM15P57071 1507 aaPredicted RBP18.17■□□□□ 0.5
SHISA9-201ENST00000423335 CCDC173Q0VFZ6 552 aa18.16■□□□□ 0.5
SHISA9-201ENST00000423335 NFATC2IPQ8NCF5 419 aa18.16■□□□□ 0.5
SHISA9-201ENST00000423335 COL17A1Q9UMD9 1497 aaPredicted RBP18.16■□□□□ 0.5
SHISA9-201ENST00000423335 TBC1D9Q6ZT07 1266 aa18.16■□□□□ 0.5
SHISA9-201ENST00000423335 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
SHISA9-201ENST00000423335 ERC2O15083 957 aa18.16■□□□□ 0.5
SHISA9-201ENST00000423335 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
SHISA9-201ENST00000423335 ADCY10Q96PN6 1610 aa18.16■□□□□ 0.5
SHISA9-201ENST00000423335 IFNL2Q8IZJ0 200 aa18.15■□□□□ 0.5
SHISA9-201ENST00000423335 NSD2O96028 1365 aa18.15■□□□□ 0.5
SHISA9-201ENST00000423335 HOXC9P31274 260 aa18.15■□□□□ 0.5
SHISA9-201ENST00000423335 MYD88Q99836 296 aa18.15■□□□□ 0.5
SHISA9-201ENST00000423335 CIZ1Q9ULV3 898 aaPredicted RBP18.15■□□□□ 0.5
SHISA9-201ENST00000423335 FAM184AQ8NB25 1140 aa18.15■□□□□ 0.5
SHISA9-201ENST00000423335 SYCE3A1L190 88 aa18.14■□□□□ 0.5
SHISA9-201ENST00000423335 CCT4P50991 539 aaKnown RBP18.14■□□□□ 0.5
SHISA9-201ENST00000423335 FLIIQ13045 1269 aa18.14■□□□□ 0.5
SHISA9-201ENST00000423335 WASHC4Q2M389 1173 aa18.14■□□□□ 0.5
SHISA9-201ENST00000423335 BICD2Q8TD16 824 aa18.14■□□□□ 0.5
SHISA9-201ENST00000423335 SLAIN2Q9P270 581 aa18.14■□□□□ 0.5
SHISA9-201ENST00000423335 HTATSF1O43719 755 aaKnown RBP18.14■□□□□ 0.49
SHISA9-201ENST00000423335 SF3A1Q15459 793 aaKnown RBP18.14■□□□□ 0.49
SHISA9-201ENST00000423335 TSHZ3Q63HK5 1081 aa18.14■□□□□ 0.49
SHISA9-201ENST00000423335 BTG4Q9NY30 223 aa18.14■□□□□ 0.49
SHISA9-201ENST00000423335 GCC2Q8IWJ2 1684 aa18.13■□□□□ 0.49
SHISA9-201ENST00000423335 LMTK3Q96Q04 1460 aa18.13■□□□□ 0.49
SHISA9-201ENST00000423335 PTPRTO14522 1441 aa18.13■□□□□ 0.49
SHISA9-201ENST00000423335 RUFY2Q8WXA3 655 aa18.13■□□□□ 0.49
SHISA9-201ENST00000423335 BECN2A8MW95 431 aa18.13■□□□□ 0.49
SHISA9-201ENST00000423335 NUTM1Q86Y26 1132 aa18.13■□□□□ 0.49
SHISA9-201ENST00000423335 CNNM1Q9NRU3 951 aa18.13■□□□□ 0.49
SHISA9-201ENST00000423335 RAD21O60216 631 aa18.12■□□□□ 0.49
SHISA9-201ENST00000423335 STK11IPQ8N1F8 1099 aa18.12■□□□□ 0.49
SHISA9-201ENST00000423335 LARP6Q9BRS8 491 aaKnown RBP18.12■□□□□ 0.49
SHISA9-201ENST00000423335 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
SHISA9-201ENST00000423335 ROBO2Q9HCK4 1378 aa18.11■□□□□ 0.49
SHISA9-201ENST00000423335 GOLGA6L19H0YKK7 550 aa18.11■□□□□ 0.49
SHISA9-201ENST00000423335 FSD1Q9BTV5 496 aa18.11■□□□□ 0.49
SHISA9-201ENST00000423335 MBD3O95983 291 aa18.11■□□□□ 0.49
SHISA9-201ENST00000423335 LRRFIP2Q9Y608 721 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms