RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ATP10DQ9P241 1426 aa20.39■□□□□ 0.86
NPC1L1-203ENST00000423141 DCTN1Q14203 1278 aa20.39■□□□□ 0.85
NPC1L1-203ENST00000423141 ANKRD44Q8N8A2 993 aa20.39■□□□□ 0.85
NPC1L1-203ENST00000423141 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
NPC1L1-203ENST00000423141 CFAP44Q96MT7 982 aa20.38■□□□□ 0.85
NPC1L1-203ENST00000423141 ZFYVE9O95405 1425 aa20.38■□□□□ 0.85
NPC1L1-203ENST00000423141 CASC1Q6TDU7 716 aa20.38■□□□□ 0.85
NPC1L1-203ENST00000423141 EMILIN1Q9Y6C2 1016 aa20.38■□□□□ 0.85
NPC1L1-203ENST00000423141 CEP85Q6P2H3 762 aa20.37■□□□□ 0.85
NPC1L1-203ENST00000423141 TMX3Q96JJ7 454 aa20.37■□□□□ 0.85
NPC1L1-203ENST00000423141 PRDM10Q9NQV6 1147 aa20.37■□□□□ 0.85
NPC1L1-203ENST00000423141 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.37■□□□□ 0.85
NPC1L1-203ENST00000423141 ABCC3O15438 1527 aa20.37■□□□□ 0.85
NPC1L1-203ENST00000423141 SIGLEC1Q9BZZ2 1709 aa20.37■□□□□ 0.85
NPC1L1-203ENST00000423141 KRT24Q2M2I5 525 aa20.37■□□□□ 0.85
NPC1L1-203ENST00000423141 FOXD4L6Q3SYB3 417 aaPredicted RBP20.37■□□□□ 0.85
NPC1L1-203ENST00000423141 FOXD4L3Q6VB84 417 aaPredicted RBP20.37■□□□□ 0.85
NPC1L1-203ENST00000423141 YEATS2Q9ULM3 1422 aa20.36■□□□□ 0.85
NPC1L1-203ENST00000423141 PTMAP06454 111 aaKnown RBP20.36■□□□□ 0.85
NPC1L1-203ENST00000423141 NEK4P51957 841 aa20.36■□□□□ 0.85
NPC1L1-203ENST00000423141 PTPRMP28827 1452 aa20.36■□□□□ 0.85
NPC1L1-203ENST00000423141 REC8O95072 547 aa20.36■□□□□ 0.85
NPC1L1-203ENST00000423141 NOL8Q76FK4 1167 aaKnown RBP20.36■□□□□ 0.85
NPC1L1-203ENST00000423141 TSC1Q92574 1164 aa20.36■□□□□ 0.85
NPC1L1-203ENST00000423141 FRMPD1Q5SYB0 1578 aa20.35■□□□□ 0.85
NPC1L1-203ENST00000423141 CDK19Q9BWU1 502 aa20.35■□□□□ 0.85
NPC1L1-203ENST00000423141 ERC2O15083 957 aa20.35■□□□□ 0.85
NPC1L1-203ENST00000423141 MBD3O95983 291 aa20.35■□□□□ 0.85
NPC1L1-203ENST00000423141 GDPD2Q9HCC8 539 aa20.34■□□□□ 0.85
NPC1L1-203ENST00000423141 BRD1O95696 1058 aa20.34■□□□□ 0.85
NPC1L1-203ENST00000423141 ZNF830Q96NB3 372 aaPredicted RBP20.34■□□□□ 0.85
NPC1L1-203ENST00000423141 TSPY26PQ9H489 355 aa20.34■□□□□ 0.85
NPC1L1-203ENST00000423141 YTHDC2Q9H6S0 1430 aaKnown RBP20.33■□□□□ 0.85
NPC1L1-203ENST00000423141 HECW2Q9P2P5 1572 aa20.33■□□□□ 0.84
NPC1L1-203ENST00000423141 KIAA2012Q0VF49 1180 aa20.33■□□□□ 0.84
NPC1L1-203ENST00000423141 IDI1Q13907 227 aa20.33■□□□□ 0.84
NPC1L1-203ENST00000423141 TSHZ3Q63HK5 1081 aa20.33■□□□□ 0.84
NPC1L1-203ENST00000423141 MEIS3Q99687 375 aa20.33■□□□□ 0.84
NPC1L1-203ENST00000423141 KIF20BQ96Q89 1820 aa20.32■□□□□ 0.84
NPC1L1-203ENST00000423141 MSH6P52701 1360 aa20.32■□□□□ 0.84
NPC1L1-203ENST00000423141 IL13P35225 146 aa20.32■□□□□ 0.84
NPC1L1-203ENST00000423141 RGS12O14924 1447 aa20.32■□□□□ 0.84
NPC1L1-203ENST00000423141 KIF24Q5T7B8 1368 aa20.32■□□□□ 0.84
NPC1L1-203ENST00000423141 GADD45BO75293 160 aaPredicted RBP20.32■□□□□ 0.84
NPC1L1-203ENST00000423141 MTERF4Q7Z6M4 381 aaKnown RBP20.32■□□□□ 0.84
NPC1L1-203ENST00000423141 RTL1A6NKG5 1358 aa20.31■□□□□ 0.84
NPC1L1-203ENST00000423141 RPAP2Q8IXW5 612 aaPredicted RBP20.31■□□□□ 0.84
NPC1L1-203ENST00000423141 SMAP1Q8IYB5 467 aaPredicted RBP20.31■□□□□ 0.84
NPC1L1-203ENST00000423141 PALD1Q9ULE6 856 aa20.31■□□□□ 0.84
NPC1L1-203ENST00000423141 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
NPC1L1-203ENST00000423141 ARHGEF40Q8TER5 1519 aa20.31■□□□□ 0.84
NPC1L1-203ENST00000423141 RIMS2Q9UQ26 1411 aa20.31■□□□□ 0.84
NPC1L1-203ENST00000423141 DNTTIP2Q5QJE6 756 aaKnown RBP20.3■□□□□ 0.84
NPC1L1-203ENST00000423141 C17orf53Q8N3J3 647 aaPredicted RBP20.3■□□□□ 0.84
NPC1L1-203ENST00000423141 MAP2P11137 1827 aaKnown RBP20.3■□□□□ 0.84
NPC1L1-203ENST00000423141 ZRANB1Q9UGI0 708 aa20.29■□□□□ 0.84
NPC1L1-203ENST00000423141 DLG5Q8TDM6 1919 aa20.29■□□□□ 0.84
NPC1L1-203ENST00000423141 MYRIPQ8NFW9 859 aa20.28■□□□□ 0.84
NPC1L1-203ENST00000423141 FAM177BA6PVY3 158 aa20.27■□□□□ 0.84
NPC1L1-203ENST00000423141 TPRNQ4KMQ1 711 aa20.27■□□□□ 0.84
NPC1L1-203ENST00000423141 ZNF710Q8N1W2 664 aa20.27■□□□□ 0.84
NPC1L1-203ENST00000423141 CCDC94Q9BW85 323 aaPredicted RBP20.27■□□□□ 0.84
NPC1L1-203ENST00000423141 ZHX1Q9UKY1 873 aaPredicted RBP20.27■□□□□ 0.84
NPC1L1-203ENST00000423141 CLTCQ00610 1675 aaKnown RBP20.27■□□□□ 0.84
NPC1L1-203ENST00000423141 PDE1AP54750 535 aa20.27■□□□□ 0.83
NPC1L1-203ENST00000423141 CUL4AQ13619 759 aa20.27■□□□□ 0.83
NPC1L1-203ENST00000423141 USP25Q9UHP3 1055 aa20.27■□□□□ 0.83
NPC1L1-203ENST00000423141 TTC12Q9H892 705 aaPredicted RBP20.26■□□□□ 0.83
NPC1L1-203ENST00000423141 NME9Q86XW9 330 aa20.25■□□□□ 0.83
NPC1L1-203ENST00000423141 POGZQ7Z3K3 1410 aa20.25■□□□□ 0.83
NPC1L1-203ENST00000423141 LMOD3Q0VAK6 560 aa20.25■□□□□ 0.83
NPC1L1-203ENST00000423141 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
NPC1L1-203ENST00000423141 USP48Q86UV5 1035 aa20.25■□□□□ 0.83
NPC1L1-203ENST00000423141 ASXL2Q76L83 1435 aa20.24■□□□□ 0.83
NPC1L1-203ENST00000423141 UPF3BQ9BZI7 483 aaKnown RBP20.24■□□□□ 0.83
NPC1L1-203ENST00000423141 NOLC1Q14978 699 aaKnown RBP eCLIP20.23■□□□□ 0.83
NPC1L1-203ENST00000423141 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
NPC1L1-203ENST00000423141 SYAP1Q96A49 352 aaPredicted RBP20.23■□□□□ 0.83
NPC1L1-203ENST00000423141 ESYT1Q9BSJ8 1104 aa20.23■□□□□ 0.83
NPC1L1-203ENST00000423141 EXOC6BQ9Y2D4 811 aa20.22■□□□□ 0.83
NPC1L1-203ENST00000423141 MYO5BQ9ULV0 1848 aa20.22■□□□□ 0.83
NPC1L1-203ENST00000423141 OSBPL3Q9H4L5 887 aa20.22■□□□□ 0.83
NPC1L1-203ENST00000423141 ANO2Q9NQ90 1003 aa20.22■□□□□ 0.83
NPC1L1-203ENST00000423141 WAPLQ7Z5K2 1190 aa20.21■□□□□ 0.83
NPC1L1-203ENST00000423141 ADCY5O95622 1261 aa20.21■□□□□ 0.83
NPC1L1-203ENST00000423141 MCM2P49736 904 aa20.21■□□□□ 0.83
NPC1L1-203ENST00000423141 AEBP1Q8IUX7 1158 aa20.21■□□□□ 0.83
NPC1L1-203ENST00000423141 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.21■□□□□ 0.83
NPC1L1-203ENST00000423141 ZSCAN20P17040 1043 aaPredicted RBP20.2■□□□□ 0.82
NPC1L1-203ENST00000423141 TCHHQ07283 1943 aa20.2■□□□□ 0.82
NPC1L1-203ENST00000423141 MCM10Q7L590 875 aa20.2■□□□□ 0.82
NPC1L1-203ENST00000423141 INTS4Q96HW7 963 aaKnown RBP20.2■□□□□ 0.82
NPC1L1-203ENST00000423141 HCLS1P14317 486 aaPredicted RBP20.2■□□□□ 0.82
NPC1L1-203ENST00000423141 F6X3S4 739 aa20.19■□□□□ 0.82
NPC1L1-203ENST00000423141 SLC4A10Q6U841 1118 aa20.19■□□□□ 0.82
NPC1L1-203ENST00000423141 CPSF1Q10570 1443 aaKnown RBP20.19■□□□□ 0.82
NPC1L1-203ENST00000423141 PRIMPOLQ96LW4 560 aa20.19■□□□□ 0.82
NPC1L1-203ENST00000423141 PHF14O94880 888 aa20.18■□□□□ 0.82
NPC1L1-203ENST00000423141 CBX1P83916 185 aa20.18■□□□□ 0.82
NPC1L1-203ENST00000423141 RILPL2Q969X0 211 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms