RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 EYA1Q99502 592 aa18.76■□□□□ 0.59
SEC23B-205ENST00000422877 BTAF1O14981 1849 aa18.76■□□□□ 0.59
SEC23B-205ENST00000422877 COL3A1P02461 1466 aaPredicted RBP18.76■□□□□ 0.59
SEC23B-205ENST00000422877 TATP17735 454 aaPredicted RBP18.75■□□□□ 0.59
SEC23B-205ENST00000422877 USHBP1Q8N6Y0 703 aa18.75■□□□□ 0.59
SEC23B-205ENST00000422877 ITGB4P16144 1822 aa18.74■□□□□ 0.59
SEC23B-205ENST00000422877 PARD3Q8TEW0 1356 aa18.74■□□□□ 0.59
SEC23B-205ENST00000422877 KDRP35968 1356 aa18.73■□□□□ 0.59
SEC23B-205ENST00000422877 ZCRB1Q8TBF4 217 aaKnown RBP18.72■□□□□ 0.59
SEC23B-205ENST00000422877 TRIM37O94972 964 aa18.71■□□□□ 0.59
SEC23B-205ENST00000422877 IL13P35225 146 aa18.71■□□□□ 0.59
SEC23B-205ENST00000422877 BAG6P46379 1132 aa18.71■□□□□ 0.59
SEC23B-205ENST00000422877 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
SEC23B-205ENST00000422877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.71■□□□□ 0.59
SEC23B-205ENST00000422877 NUP188Q5SRE5 1749 aa18.71■□□□□ 0.59
SEC23B-205ENST00000422877 TOGARAM1Q9Y4F4 1720 aa18.71■□□□□ 0.59
SEC23B-205ENST00000422877 PCDH11XQ9BZA7 1347 aa18.71■□□□□ 0.59
SEC23B-205ENST00000422877 PCDH11YQ9BZA8 1340 aa18.71■□□□□ 0.59
SEC23B-205ENST00000422877 DIAPH1O60610 1272 aaKnown RBP18.68■□□□□ 0.58
SEC23B-205ENST00000422877 PPP2R1AP30153 589 aa18.68■□□□□ 0.58
SEC23B-205ENST00000422877 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
SEC23B-205ENST00000422877 BCL11BQ9C0K0 894 aaPredicted RBP18.68■□□□□ 0.58
SEC23B-205ENST00000422877 LY75O60449 1722 aa18.67■□□□□ 0.58
SEC23B-205ENST00000422877 SCN11AQ9UI33 1791 aa18.67■□□□□ 0.58
SEC23B-205ENST00000422877 ZNF316A6NFI3 1004 aaPredicted RBP18.66■□□□□ 0.58
SEC23B-205ENST00000422877 DEFB132Q7Z7B7 95 aa18.66■□□□□ 0.58
SEC23B-205ENST00000422877 DDX54Q8TDD1 881 aaKnown RBP18.66■□□□□ 0.58
SEC23B-205ENST00000422877 CFAP53Q96M91 514 aa18.66■□□□□ 0.58
SEC23B-205ENST00000422877 SPG7Q9UQ90 795 aa18.66■□□□□ 0.58
SEC23B-205ENST00000422877 RALBP1Q15311 655 aa18.65■□□□□ 0.58
SEC23B-205ENST00000422877 PLSCR1O15162 318 aa18.64■□□□□ 0.57
SEC23B-205ENST00000422877 APBA3O96018 575 aa18.64■□□□□ 0.57
SEC23B-205ENST00000422877 AMOTQ4VCS5 1084 aa18.63■□□□□ 0.57
SEC23B-205ENST00000422877 SULT6B1Q6IMI4 303 aa18.63■□□□□ 0.57
SEC23B-205ENST00000422877 CYP27B1O15528 508 aa18.62■□□□□ 0.57
SEC23B-205ENST00000422877 CAMKK2Q96RR4 588 aa18.62■□□□□ 0.57
SEC23B-205ENST00000422877 ADAMTS7Q9UKP4 1686 aa18.61■□□□□ 0.57
SEC23B-205ENST00000422877 EN1Q05925 392 aaPredicted RBP18.61■□□□□ 0.57
SEC23B-205ENST00000422877 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
SEC23B-205ENST00000422877 AEBP1Q8IUX7 1158 aa18.61■□□□□ 0.57
SEC23B-205ENST00000422877 PLEKHO1Q53GL0 409 aaPredicted RBP18.6■□□□□ 0.57
SEC23B-205ENST00000422877 IFNL2Q8IZJ0 200 aa18.6■□□□□ 0.57
SEC23B-205ENST00000422877 TAF1LQ8IZX4 1826 aa18.59■□□□□ 0.57
SEC23B-205ENST00000422877 KCNQ2O43526 872 aa18.59■□□□□ 0.57
SEC23B-205ENST00000422877 PHKG2P15735 406 aa18.59■□□□□ 0.57
SEC23B-205ENST00000422877 ACSBG1Q96GR2 724 aa18.59■□□□□ 0.57
SEC23B-205ENST00000422877 NUDCQ9Y266 331 aa18.59■□□□□ 0.57
SEC23B-205ENST00000422877 MYBBP1AQ9BQG0 1328 aaKnown RBP18.58■□□□□ 0.57
SEC23B-205ENST00000422877 EZH2Q15910 746 aaKnown RBP18.58■□□□□ 0.56
SEC23B-205ENST00000422877 PTF1AQ7RTS3 328 aa18.58■□□□□ 0.56
SEC23B-205ENST00000422877 DLG5Q8TDM6 1919 aa18.58■□□□□ 0.56
SEC23B-205ENST00000422877 QSER1Q2KHR3 1735 aa18.57■□□□□ 0.56
SEC23B-205ENST00000422877 PAPPAQ13219 1627 aa18.56■□□□□ 0.56
SEC23B-205ENST00000422877 U2SURPO15042 1029 aaKnown RBP18.56■□□□□ 0.56
SEC23B-205ENST00000422877 HSP90AB1P08238 724 aaKnown RBP18.56■□□□□ 0.56
SEC23B-205ENST00000422877 HMOX1P09601 288 aa18.56■□□□□ 0.56
SEC23B-205ENST00000422877 ZNF831Q5JPB2 1677 aa18.55■□□□□ 0.56
SEC23B-205ENST00000422877 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
SEC23B-205ENST00000422877 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
SEC23B-205ENST00000422877 ZNF530Q6P9A1 599 aaPredicted RBP18.54■□□□□ 0.56
SEC23B-205ENST00000422877 SIPA1L3O60292 1781 aaPredicted RBP18.54■□□□□ 0.56
SEC23B-205ENST00000422877 C5P01031 1676 aa18.54■□□□□ 0.56
SEC23B-205ENST00000422877 KDM6AO15550 1401 aaPredicted RBP18.53■□□□□ 0.56
SEC23B-205ENST00000422877 C1orf141Q5JVX7 400 aa18.53■□□□□ 0.56
SEC23B-205ENST00000422877 SYTL4Q96C24 671 aaPredicted RBP18.53■□□□□ 0.56
SEC23B-205ENST00000422877 DCAF5Q96JK2 942 aa18.53■□□□□ 0.56
SEC23B-205ENST00000422877 RSPH6AQ9H0K4 717 aa18.52■□□□□ 0.56
SEC23B-205ENST00000422877 MRC1P22897 1456 aa18.52■□□□□ 0.55
SEC23B-205ENST00000422877 FCHSD2O94868 740 aa18.51■□□□□ 0.55
SEC23B-205ENST00000422877 AKAP4Q5JQC9 854 aa18.51■□□□□ 0.55
SEC23B-205ENST00000422877 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
SEC23B-205ENST00000422877 ERVV-2B6SEH9 535 aa18.5■□□□□ 0.55
SEC23B-205ENST00000422877 U2AF1L5P0DN76 240 aaPredicted RBP18.5■□□□□ 0.55
SEC23B-205ENST00000422877 U2AF1Q01081 240 aaKnown RBP eCLIP18.5■□□□□ 0.55
SEC23B-205ENST00000422877 TXNRD1Q16881 649 aa18.5■□□□□ 0.55
SEC23B-205ENST00000422877 CICQ96RK0 1608 aaPredicted RBP18.49■□□□□ 0.55
SEC23B-205ENST00000422877 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
SEC23B-205ENST00000422877 PROM2Q8N271 834 aa18.49■□□□□ 0.55
SEC23B-205ENST00000422877 GAS2L2Q8NHY3 880 aa18.49■□□□□ 0.55
SEC23B-205ENST00000422877 MTHFSDQ2M296 383 aaKnown RBP18.48■□□□□ 0.55
SEC23B-205ENST00000422877 MPRIPQ6WCQ1 1025 aa18.48■□□□□ 0.55
SEC23B-205ENST00000422877 TMOD3Q9NYL9 352 aa18.48■□□□□ 0.55
SEC23B-205ENST00000422877 CASZ1Q86V15 1759 aa18.47■□□□□ 0.55
SEC23B-205ENST00000422877 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
SEC23B-205ENST00000422877 COL5A3P25940 1745 aaPredicted RBP18.47■□□□□ 0.55
SEC23B-205ENST00000422877 PRKAR2BP31323 418 aa18.47■□□□□ 0.55
SEC23B-205ENST00000422877 NBPF14Q5TI25 921 aa18.47■□□□□ 0.55
SEC23B-205ENST00000422877 SMARCC1Q92922 1105 aaPredicted RBP18.47■□□□□ 0.55
SEC23B-205ENST00000422877 PALLDQ8WX93 1383 aa18.46■□□□□ 0.55
SEC23B-205ENST00000422877 HMGB2P26583 209 aaKnown RBP18.46■□□□□ 0.55
SEC23B-205ENST00000422877 PIGBQ92521 554 aa18.46■□□□□ 0.55
SEC23B-205ENST00000422877 MAP3K5Q99683 1374 aa18.45■□□□□ 0.54
SEC23B-205ENST00000422877 PNNQ9H307 717 aaKnown RBP18.45■□□□□ 0.54
SEC23B-205ENST00000422877 LRP5O75197 1615 aa18.45■□□□□ 0.54
SEC23B-205ENST00000422877 UBR3Q6ZT12 1888 aa18.43■□□□□ 0.54
SEC23B-205ENST00000422877 C4BP0C0L5 1744 aa18.43■□□□□ 0.54
SEC23B-205ENST00000422877 GNAT3A8MTJ3 354 aa18.42■□□□□ 0.54
SEC23B-205ENST00000422877 NEFMP07197 916 aa18.42■□□□□ 0.54
SEC23B-205ENST00000422877 CABP4P57796 275 aa18.42■□□□□ 0.54
SEC23B-205ENST00000422877 PHACTR3Q96KR7 559 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms