RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 C8orf34Q49A92 452 aa29.36■■■□□ 2.29
LSM8-203ENST00000422760 VAMP4O75379 141 aa29.35■■■□□ 2.29
LSM8-203ENST00000422760 LMOD2Q6P5Q4 547 aa29.35■■■□□ 2.29
LSM8-203ENST00000422760 NOB1Q9ULX3 412 aaKnown RBP29.35■■■□□ 2.29
LSM8-203ENST00000422760 MVPQ14764 893 aaKnown RBP29.35■■■□□ 2.29
LSM8-203ENST00000422760 ATF7IPQ6VMQ6 1270 aa29.35■■■□□ 2.29
LSM8-203ENST00000422760 GCP02774 474 aa29.34■■■□□ 2.29
LSM8-203ENST00000422760 GAS2L2Q8NHY3 880 aa29.34■■■□□ 2.29
LSM8-203ENST00000422760 NBR1Q14596 966 aa29.33■■■□□ 2.29
LSM8-203ENST00000422760 CRB1P82279 1406 aa29.33■■■□□ 2.29
LSM8-203ENST00000422760 MSH6P52701 1360 aa29.33■■■□□ 2.29
LSM8-203ENST00000422760 RGPD2P0DJD1 1756 aa29.33■■■□□ 2.29
LSM8-203ENST00000422760 LRRC37A3O60309 1634 aa29.33■■■□□ 2.29
LSM8-203ENST00000422760 DEKP35659 375 aaKnown RBP29.33■■■□□ 2.29
LSM8-203ENST00000422760 TWISTNBQ3B726 338 aaPredicted RBP29.33■■■□□ 2.29
LSM8-203ENST00000422760 CADPS2Q86UW7 1296 aa29.33■■■□□ 2.29
LSM8-203ENST00000422760 ZBTB7CA1YPR0 619 aa29.32■■■□□ 2.28
LSM8-203ENST00000422760 BRPF1P55201 1214 aaPredicted RBP29.32■■■□□ 2.28
LSM8-203ENST00000422760 SKAP1Q86WV1 359 aa29.32■■■□□ 2.28
LSM8-203ENST00000422760 C8orf58Q8NAV2 365 aa29.32■■■□□ 2.28
LSM8-203ENST00000422760 ELL2O00472 640 aaPredicted RBP29.31■■■□□ 2.28
LSM8-203ENST00000422760 CHL1O00533 1208 aa29.3■■■□□ 2.28
LSM8-203ENST00000422760 IPO8O15397 1037 aaKnown RBP29.3■■■□□ 2.28
LSM8-203ENST00000422760 PLEKHG5O94827 1062 aa29.3■■■□□ 2.28
LSM8-203ENST00000422760 ARHGEF25Q86VW2 580 aa29.3■■■□□ 2.28
LSM8-203ENST00000422760 RTF1Q92541 710 aaKnown RBP29.3■■■□□ 2.28
LSM8-203ENST00000422760 USHBP1Q8N6Y0 703 aa29.29■■■□□ 2.28
LSM8-203ENST00000422760 MED1Q15648 1581 aaPredicted RBP29.29■■■□□ 2.28
LSM8-203ENST00000422760 IGHDP01880 384 aa29.28■■■□□ 2.28
LSM8-203ENST00000422760 DAXXQ9UER7 740 aaPredicted RBP29.28■■■□□ 2.28
LSM8-203ENST00000422760 MRPL50Q8N5N7 158 aaKnown RBP29.27■■■□□ 2.28
LSM8-203ENST00000422760 DDX17Q92841 729 aaKnown RBP29.26■■■□□ 2.27
LSM8-203ENST00000422760 NBPF6Q5VWK0 638 aa29.26■■■□□ 2.27
LSM8-203ENST00000422760 NBPF4Q96M43 638 aa29.26■■■□□ 2.27
LSM8-203ENST00000422760 ITPRIPQ8IWB1 547 aa29.24■■■□□ 2.27
LSM8-203ENST00000422760 PCDHB15Q9Y5E8 787 aa29.24■■■□□ 2.27
LSM8-203ENST00000422760 NPHP3Q7Z494 1330 aa29.24■■■□□ 2.27
LSM8-203ENST00000422760 KIAA0232Q92628 1395 aa29.24■■■□□ 2.27
LSM8-203ENST00000422760 MAP3K5Q99683 1374 aa29.23■■■□□ 2.27
LSM8-203ENST00000422760 HTATSF1O43719 755 aaKnown RBP29.23■■■□□ 2.27
LSM8-203ENST00000422760 RGS3P49796 1198 aa29.23■■■□□ 2.27
LSM8-203ENST00000422760 TMEM57Q8N5G2 664 aa29.23■■■□□ 2.27
LSM8-203ENST00000422760 DDX19BQ9UMR2 479 aa29.23■■■□□ 2.27
LSM8-203ENST00000422760 CAMTA1Q9Y6Y1 1673 aa29.23■■■□□ 2.27
LSM8-203ENST00000422760 GNAT3A8MTJ3 354 aa29.22■■■□□ 2.27
LSM8-203ENST00000422760 PXDNQ92626 1479 aa29.22■■■□□ 2.27
LSM8-203ENST00000422760 RGPD5Q99666 1765 aa29.22■■■□□ 2.27
LSM8-203ENST00000422760 KRT24Q2M2I5 525 aa29.22■■■□□ 2.27
LSM8-203ENST00000422760 RWDD1Q9H446 243 aaPredicted RBP29.22■■■□□ 2.27
LSM8-203ENST00000422760 TNS3Q68CZ2 1445 aa29.21■■■□□ 2.27
LSM8-203ENST00000422760 ZNF335Q9H4Z2 1342 aaPredicted RBP29.21■■■□□ 2.27
LSM8-203ENST00000422760 NCAPD2Q15021 1401 aa29.2■■■□□ 2.27
LSM8-203ENST00000422760 LRRC59Q96AG4 307 aaKnown RBP29.2■■■□□ 2.27
LSM8-203ENST00000422760 ARHGAP45Q92619 1136 aa29.2■■■□□ 2.26
LSM8-203ENST00000422760 BCL11AQ9H165 835 aa29.19■■■□□ 2.26
LSM8-203ENST00000422760 CRYBG1Q9Y4K1 1723 aa29.18■■■□□ 2.26
LSM8-203ENST00000422760 HAP1P54257 671 aaPredicted RBP29.18■■■□□ 2.26
LSM8-203ENST00000422760 MIS18AQ9NYP9 233 aa29.18■■■□□ 2.26
LSM8-203ENST00000422760 TSPYL4Q9UJ04 414 aa29.18■■■□□ 2.26
LSM8-203ENST00000422760 ANKRD24Q8TF21 1146 aa29.16■■■□□ 2.26
LSM8-203ENST00000422760 AXIN2Q9Y2T1 843 aa29.15■■■□□ 2.26
LSM8-203ENST00000422760 LMO7Q8WWI1 1683 aa29.15■■■□□ 2.26
LSM8-203ENST00000422760 ABCC4O15439 1325 aa29.14■■■□□ 2.26
LSM8-203ENST00000422760 ZC3H6P61129 1189 aaKnown RBP29.14■■■□□ 2.25
LSM8-203ENST00000422760 BRINP3Q76B58 766 aa29.13■■■□□ 2.25
LSM8-203ENST00000422760 IL17REQ8NFR9 667 aa29.13■■■□□ 2.25
LSM8-203ENST00000422760 ZBTB40Q9NUA8 1239 aa29.12■■■□□ 2.25
LSM8-203ENST00000422760 SPATA31A3Q5VYP0 1347 aa29.11■■■□□ 2.25
LSM8-203ENST00000422760 COL18A1P39060 1754 aa29.11■■■□□ 2.25
LSM8-203ENST00000422760 ERBB3P21860 1342 aa29.11■■■□□ 2.25
LSM8-203ENST00000422760 API5Q9BZZ5 524 aaKnown RBP29.09■■■□□ 2.25
LSM8-203ENST00000422760 CEMIPQ8WUJ3 1361 aa29.09■■■□□ 2.25
LSM8-203ENST00000422760 ABCC6O95255 1503 aa29.07■■■□□ 2.24
LSM8-203ENST00000422760 FAM208AQ9UK61 1670 aaKnown RBP29.07■■■□□ 2.24
LSM8-203ENST00000422760 CABLES1Q8TDN4 633 aa29.07■■■□□ 2.24
LSM8-203ENST00000422760 UPF2Q9HAU5 1272 aaKnown RBP29.06■■■□□ 2.24
LSM8-203ENST00000422760 HDAC1Q13547 482 aaPredicted RBP29.06■■■□□ 2.24
LSM8-203ENST00000422760 RGS12O14924 1447 aa29.06■■■□□ 2.24
LSM8-203ENST00000422760 TAF7Q15545 349 aaPredicted RBP29.04■■■□□ 2.24
LSM8-203ENST00000422760 PLEKHO1Q53GL0 409 aaPredicted RBP29.04■■■□□ 2.24
LSM8-203ENST00000422760 ZNF530Q6P9A1 599 aaPredicted RBP29.04■■■□□ 2.24
LSM8-203ENST00000422760 BABAM1Q9NWV8 329 aa29.04■■■□□ 2.24
LSM8-203ENST00000422760 SLAIN2Q9P270 581 aa29.04■■■□□ 2.24
LSM8-203ENST00000422760 BECN1Q14457 450 aa29.04■■■□□ 2.24
LSM8-203ENST00000422760 CHMP4BQ9H444 224 aaKnown RBP29.04■■■□□ 2.24
LSM8-203ENST00000422760 AMOTQ4VCS5 1084 aa29.03■■■□□ 2.24
LSM8-203ENST00000422760 KDM3BQ7LBC6 1761 aa29.03■■■□□ 2.24
LSM8-203ENST00000422760 ZBTB7BO15156 539 aaPredicted RBP29.02■■■□□ 2.24
LSM8-203ENST00000422760 AKAP4Q5JQC9 854 aa29.02■■■□□ 2.24
LSM8-203ENST00000422760 PDZRN3Q9UPQ7 1066 aa29.01■■■□□ 2.23
LSM8-203ENST00000422760 PTPRCP08575 1304 aa29.01■■■□□ 2.23
LSM8-203ENST00000422760 CPDO75976 1380 aa28.99■■■□□ 2.23
LSM8-203ENST00000422760 LGR6Q9HBX8 967 aa28.99■■■□□ 2.23
LSM8-203ENST00000422760 SOS2Q07890 1332 aaPredicted RBP28.99■■■□□ 2.23
LSM8-203ENST00000422760 SLC4A2P04920 1241 aa28.98■■■□□ 2.23
LSM8-203ENST00000422760 OVOS2A0A0G2JMS6 1433 aa28.97■■■□□ 2.23
LSM8-203ENST00000422760 CACNA1FO60840 1977 aa28.97■■■□□ 2.23
LSM8-203ENST00000422760 SOS1Q07889 1333 aaPredicted RBP28.97■■■□□ 2.23
LSM8-203ENST00000422760 CHRNA2Q15822 529 aa28.96■■■□□ 2.23
LSM8-203ENST00000422760 C1orf141Q5JVX7 400 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms