RNA–Protein interactions for RNA: ENST00000421450.1

TNFAIP3-203, Transcript of TNF alpha induced protein 3, humanhuman

TSL 2

Gene TNFAIP3, Length 421 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-203ENST00000421450 NSD2O96028 1365 aa24.07■■□□□ 1.44
TNFAIP3-203ENST00000421450 MEGF6O75095 1541 aa24.06■■□□□ 1.44
TNFAIP3-203ENST00000421450 NUP188Q5SRE5 1749 aa24.06■■□□□ 1.44
TNFAIP3-203ENST00000421450 WASHC2AQ641Q2 1341 aa24.06■■□□□ 1.44
TNFAIP3-203ENST00000421450 SYTL4Q96C24 671 aaPredicted RBP24.04■■□□□ 1.44
TNFAIP3-203ENST00000421450 NHSQ6T4R5 1651 aa24.04■■□□□ 1.44
TNFAIP3-203ENST00000421450 RGPD3A6NKT7 1758 aaPredicted RBP24.03■■□□□ 1.44
TNFAIP3-203ENST00000421450 RGPD4Q7Z3J3 1758 aa24.03■■□□□ 1.44
TNFAIP3-203ENST00000421450 TXNRD1Q16881 649 aa24.01■■□□□ 1.43
TNFAIP3-203ENST00000421450 EYA1Q99502 592 aa23.99■■□□□ 1.43
TNFAIP3-203ENST00000421450 PRIM1P49642 420 aaKnown RBP23.98■■□□□ 1.43
TNFAIP3-203ENST00000421450 PROM2Q8N271 834 aa23.98■■□□□ 1.43
TNFAIP3-203ENST00000421450 PCDH11XQ9BZA7 1347 aa23.98■■□□□ 1.43
TNFAIP3-203ENST00000421450 PCDH11YQ9BZA8 1340 aa23.98■■□□□ 1.43
TNFAIP3-203ENST00000421450 BTAF1O14981 1849 aa23.98■■□□□ 1.43
TNFAIP3-203ENST00000421450 EIF4A2Q14240 407 aaKnown RBP23.97■■□□□ 1.43
TNFAIP3-203ENST00000421450 SHANK3Q9BYB0 1731 aa23.96■■□□□ 1.43
TNFAIP3-203ENST00000421450 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
TNFAIP3-203ENST00000421450 AMER1Q5JTC6 1135 aaPredicted RBP23.95■■□□□ 1.42
TNFAIP3-203ENST00000421450 STK32BQ9NY57 414 aa23.95■■□□□ 1.42
TNFAIP3-203ENST00000421450 DOT1LQ8TEK3 1739 aa23.94■■□□□ 1.42
TNFAIP3-203ENST00000421450 ANO8Q9HCE9 1232 aaPredicted RBP23.94■■□□□ 1.42
TNFAIP3-203ENST00000421450 SPG7Q9UQ90 795 aa23.94■■□□□ 1.42
TNFAIP3-203ENST00000421450 CC2D1BQ5T0F9 858 aaKnown RBP23.93■■□□□ 1.42
TNFAIP3-203ENST00000421450 LRP5O75197 1615 aa23.92■■□□□ 1.42
TNFAIP3-203ENST00000421450 PER1O15534 1290 aaPredicted RBP23.9■■□□□ 1.42
TNFAIP3-203ENST00000421450 NCAPD2Q15021 1401 aa23.9■■□□□ 1.42
TNFAIP3-203ENST00000421450 CYP27B1O15528 508 aa23.89■■□□□ 1.41
TNFAIP3-203ENST00000421450 SLC15A2Q16348 729 aa23.88■■□□□ 1.41
TNFAIP3-203ENST00000421450 PKD1L3Q7Z443 1732 aa23.87■■□□□ 1.41
TNFAIP3-203ENST00000421450 IGSF1Q8N6C5 1336 aa23.86■■□□□ 1.41
TNFAIP3-203ENST00000421450 SLC27A3Q5K4L6 730 aa23.86■■□□□ 1.41
TNFAIP3-203ENST00000421450 MPRIPQ6WCQ1 1025 aa23.86■■□□□ 1.41
TNFAIP3-203ENST00000421450 SPON1Q9HCB6 807 aa23.86■■□□□ 1.41
TNFAIP3-203ENST00000421450 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.86■■□□□ 1.412e-6■□□□□ 8.4
TNFAIP3-203ENST00000421450 SRCAPQ6ZRS2 3230 aa23.85■■□□□ 1.41
TNFAIP3-203ENST00000421450 MTHFSP49914 203 aa23.85■■□□□ 1.41
TNFAIP3-203ENST00000421450 IFNL2Q8IZJ0 200 aa23.84■■□□□ 1.41
TNFAIP3-203ENST00000421450 LRRC4BQ9NT99 713 aa23.84■■□□□ 1.41
TNFAIP3-203ENST00000421450 KCNQ4P56696 695 aa23.83■■□□□ 1.41
TNFAIP3-203ENST00000421450 PLEKHO1Q53GL0 409 aaPredicted RBP23.82■■□□□ 1.4
TNFAIP3-203ENST00000421450 PPP1R1BQ9UD71 204 aaPredicted RBP23.82■■□□□ 1.4
TNFAIP3-203ENST00000421450 CCNL1Q9UK58 526 aaPredicted RBP23.82■■□□□ 1.4
TNFAIP3-203ENST00000421450 PHKG2P15735 406 aa23.81■■□□□ 1.4
TNFAIP3-203ENST00000421450 SULT6B1Q6IMI4 303 aa23.81■■□□□ 1.4
TNFAIP3-203ENST00000421450 ZBTB7AO95365 584 aa23.8■■□□□ 1.4
TNFAIP3-203ENST00000421450 IL13P35225 146 aa23.8■■□□□ 1.4
TNFAIP3-203ENST00000421450 AEBP1Q8IUX7 1158 aa23.8■■□□□ 1.4
TNFAIP3-203ENST00000421450 PDGFDQ9GZP0 370 aaPredicted RBP23.8■■□□□ 1.4
TNFAIP3-203ENST00000421450 NKX1-1Q15270 411 aaPredicted RBP23.79■■□□□ 1.4
TNFAIP3-203ENST00000421450 NPC1L1Q9UHC9 1359 aa23.78■■□□□ 1.4
TNFAIP3-203ENST00000421450 ZNF827Q17R98 1081 aa23.78■■□□□ 1.4
TNFAIP3-203ENST00000421450 AMOTQ4VCS5 1084 aa23.78■■□□□ 1.4
TNFAIP3-203ENST00000421450 ITGB4P16144 1822 aa23.77■■□□□ 1.4
TNFAIP3-203ENST00000421450 LY75O60449 1722 aa23.77■■□□□ 1.4
TNFAIP3-203ENST00000421450 ZNF530Q6P9A1 599 aaPredicted RBP23.77■■□□□ 1.4
TNFAIP3-203ENST00000421450 SMARCC1Q92922 1105 aaPredicted RBP23.77■■□□□ 1.4
TNFAIP3-203ENST00000421450 TMOD3Q9NYL9 352 aa23.77■■□□□ 1.4
TNFAIP3-203ENST00000421450 ATF5Q9Y2D1 282 aaPredicted RBP23.77■■□□□ 1.4
TNFAIP3-203ENST00000421450 PAPPAQ13219 1627 aa23.77■■□□□ 1.4
TNFAIP3-203ENST00000421450 TOGARAM1Q9Y4F4 1720 aa23.76■■□□□ 1.39
TNFAIP3-203ENST00000421450 CASZ1Q86V15 1759 aa23.76■■□□□ 1.39
TNFAIP3-203ENST00000421450 PIGBQ92521 554 aa23.76■■□□□ 1.39
TNFAIP3-203ENST00000421450 TFCP2L1Q9NZI6 479 aa23.76■■□□□ 1.39
TNFAIP3-203ENST00000421450 PALLDQ8WX93 1383 aa23.76■■□□□ 1.39
TNFAIP3-203ENST00000421450 PLEKHG2Q9H7P9 1386 aa23.76■■□□□ 1.39
TNFAIP3-203ENST00000421450 DIAPH1O60610 1272 aaKnown RBP23.75■■□□□ 1.39
TNFAIP3-203ENST00000421450 HSP90AB1P08238 724 aaKnown RBP23.75■■□□□ 1.39
TNFAIP3-203ENST00000421450 C1orf141Q5JVX7 400 aa23.74■■□□□ 1.39
TNFAIP3-203ENST00000421450 AKT1S1Q96B36 256 aa23.74■■□□□ 1.39
TNFAIP3-203ENST00000421450 HMOX1P09601 288 aa23.72■■□□□ 1.39
TNFAIP3-203ENST00000421450 MTFR1LQ9H019 292 aa23.72■■□□□ 1.39
TNFAIP3-203ENST00000421450 HMGB2P26583 209 aaKnown RBP23.71■■□□□ 1.39
TNFAIP3-203ENST00000421450 DCAF5Q96JK2 942 aa23.71■■□□□ 1.39
TNFAIP3-203ENST00000421450 U2SURPO15042 1029 aaKnown RBP23.7■■□□□ 1.38
TNFAIP3-203ENST00000421450 KDRP35968 1356 aa23.69■■□□□ 1.38
TNFAIP3-203ENST00000421450 MSH5O43196 834 aa23.69■■□□□ 1.38
TNFAIP3-203ENST00000421450 ERVV-2B6SEH9 535 aa23.68■■□□□ 1.38
TNFAIP3-203ENST00000421450 CABP4P57796 275 aa23.68■■□□□ 1.38
TNFAIP3-203ENST00000421450 CFAP53Q96M91 514 aa23.68■■□□□ 1.38
TNFAIP3-203ENST00000421450 PNPLA7Q6ZV29 1317 aa23.67■■□□□ 1.38
TNFAIP3-203ENST00000421450 ASAP1Q9ULH1 1129 aa23.67■■□□□ 1.38
TNFAIP3-203ENST00000421450 C5P01031 1676 aa23.65■■□□□ 1.38
TNFAIP3-203ENST00000421450 LOC102724428A0A0B4J2F2 783 aa23.65■■□□□ 1.38
TNFAIP3-203ENST00000421450 SIK1P57059 783 aa23.65■■□□□ 1.38
TNFAIP3-203ENST00000421450 SLC16A10Q8TF71 515 aa23.65■■□□□ 1.38
TNFAIP3-203ENST00000421450 PTGER2P43116 358 aa23.64■■□□□ 1.37
TNFAIP3-203ENST00000421450 AK7Q96M32 723 aa23.64■■□□□ 1.37
TNFAIP3-203ENST00000421450 QSER1Q2KHR3 1735 aa23.64■■□□□ 1.37
TNFAIP3-203ENST00000421450 TUBGCP6Q96RT7 1819 aa23.63■■□□□ 1.37
TNFAIP3-203ENST00000421450 KDM6AO15550 1401 aaPredicted RBP23.63■■□□□ 1.37
TNFAIP3-203ENST00000421450 ATP6V1AP38606 617 aa23.63■■□□□ 1.37
TNFAIP3-203ENST00000421450 ATG3Q9NT62 314 aa23.63■■□□□ 1.37
TNFAIP3-203ENST00000421450 TAF1LQ8IZX4 1826 aa23.62■■□□□ 1.37
TNFAIP3-203ENST00000421450 AKAP4Q5JQC9 854 aa23.62■■□□□ 1.37
TNFAIP3-203ENST00000421450 RBM42Q9BTD8 480 aaKnown RBP23.62■■□□□ 1.37
TNFAIP3-203ENST00000421450 POLD1P28340 1107 aa23.61■■□□□ 1.37
TNFAIP3-203ENST00000421450 PPP2R1AP30153 589 aa23.61■■□□□ 1.37
TNFAIP3-203ENST00000421450 NUDCQ9Y266 331 aa23.61■■□□□ 1.37
TNFAIP3-203ENST00000421450 COL3A1P02461 1466 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms