RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 ZNF428Q96B54 188 aa14.5□□□□□ -0.09
CLCN4-203ENST00000421085 NCOA2Q15596 1464 aa14.5□□□□□ -0.09
CLCN4-203ENST00000421085 DYDC1Q8WWB3 177 aa14.49□□□□□ -0.09
CLCN4-203ENST00000421085 IKQ13123 557 aaPredicted RBP14.49□□□□□ -0.09
CLCN4-203ENST00000421085 PDIA4P13667 645 aaKnown RBP14.49□□□□□ -0.09
CLCN4-203ENST00000421085 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLCN4-203ENST00000421085 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
CLCN4-203ENST00000421085 SLC12A5Q9H2X9 1139 aa14.49□□□□□ -0.09
CLCN4-203ENST00000421085 ZHX3Q9H4I2 956 aa14.49□□□□□ -0.09
CLCN4-203ENST00000421085 SLC3A2P08195 630 aaKnown RBP14.49□□□□□ -0.09
CLCN4-203ENST00000421085 MCM5P33992 734 aa14.49□□□□□ -0.09
CLCN4-203ENST00000421085 GPATCH11Q8N954 259 aa14.49□□□□□ -0.09
CLCN4-203ENST00000421085 ANO10Q9NW15 660 aa14.48□□□□□ -0.09
CLCN4-203ENST00000421085 EIF5P55010 431 aaKnown RBP14.48□□□□□ -0.09
CLCN4-203ENST00000421085 JAKMIP3Q5VZ66 844 aa14.48□□□□□ -0.09
CLCN4-203ENST00000421085 ANKRD18AQ8IVF6 992 aa14.48□□□□□ -0.09
CLCN4-203ENST00000421085 KIF5CO60282 957 aa14.48□□□□□ -0.09
CLCN4-203ENST00000421085 NOL7Q9UMY1 257 aaKnown RBP14.48□□□□□ -0.09
CLCN4-203ENST00000421085 SRGAP3O43295 1099 aa14.48□□□□□ -0.09
CLCN4-203ENST00000421085 NLRP6P59044 892 aa14.48□□□□□ -0.09
CLCN4-203ENST00000421085 MAP9Q49MG5 647 aa14.48□□□□□ -0.09
CLCN4-203ENST00000421085 CDKL5O76039 1030 aa14.47□□□□□ -0.09
CLCN4-203ENST00000421085 RPAP2Q8IXW5 612 aaPredicted RBP14.47□□□□□ -0.09
CLCN4-203ENST00000421085 PTPRGP23470 1445 aa14.47□□□□□ -0.09
CLCN4-203ENST00000421085 ADCY5O95622 1261 aa14.47□□□□□ -0.09
CLCN4-203ENST00000421085 KIF4BQ2VIQ3 1234 aa14.47□□□□□ -0.09
CLCN4-203ENST00000421085 NLRP2Q9NX02 1062 aa14.47□□□□□ -0.09
CLCN4-203ENST00000421085 KRT32Q14532 448 aa14.47□□□□□ -0.09
CLCN4-203ENST00000421085 TAF4BQ92750 862 aa14.47□□□□□ -0.09
CLCN4-203ENST00000421085 FYCO1Q9BQS8 1478 aa14.47□□□□□ -0.09
CLCN4-203ENST00000421085 SULT6B1Q6IMI4 303 aa14.46□□□□□ -0.09
CLCN4-203ENST00000421085 NUTM1Q86Y26 1132 aa14.46□□□□□ -0.09
CLCN4-203ENST00000421085 TMX1Q9H3N1 280 aa14.46□□□□□ -0.09
CLCN4-203ENST00000421085 CKAP2LQ8IYA6 745 aa14.46□□□□□ -0.09
CLCN4-203ENST00000421085 SEPT11Q9NVA2 429 aaKnown RBP14.46□□□□□ -0.09
CLCN4-203ENST00000421085 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.1
CLCN4-203ENST00000421085 TOP1P11387 765 aaKnown RBP14.45□□□□□ -0.1
CLCN4-203ENST00000421085 CNNM1Q9NRU3 951 aa14.45□□□□□ -0.1
CLCN4-203ENST00000421085 SMARCA5O60264 1052 aaPredicted RBP14.45□□□□□ -0.1
CLCN4-203ENST00000421085 TICAM2Q86XR7 235 aa14.45□□□□□ -0.1
CLCN4-203ENST00000421085 SCAND2PQ9GZW5 306 aaPredicted RBP14.45□□□□□ -0.1
CLCN4-203ENST00000421085 ERBINQ96RT1 1412 aa14.45□□□□□ -0.1
CLCN4-203ENST00000421085 CLCN1P35523 988 aa14.45□□□□□ -0.1
CLCN4-203ENST00000421085 IPO4Q8TEX9 1081 aaKnown RBP14.45□□□□□ -0.1
CLCN4-203ENST00000421085 RBM27Q9P2N5 1060 aaKnown RBP14.45□□□□□ -0.1
CLCN4-203ENST00000421085 FAM177BA6PVY3 158 aa14.45□□□□□ -0.1
CLCN4-203ENST00000421085 RNF187Q5TA31 235 aaPredicted RBP14.45□□□□□ -0.1
CLCN4-203ENST00000421085 IGF1RP08069 1367 aa14.44□□□□□ -0.1
CLCN4-203ENST00000421085 MAP2K1Q02750 393 aaPredicted RBP14.44□□□□□ -0.1
CLCN4-203ENST00000421085 EXOC6BQ9Y2D4 811 aa14.44□□□□□ -0.1
CLCN4-203ENST00000421085 PRIMPOLQ96LW4 560 aa14.44□□□□□ -0.1
CLCN4-203ENST00000421085 NACAP1Q9BZK3 213 aa14.44□□□□□ -0.1
CLCN4-203ENST00000421085 GDPD2Q9HCC8 539 aa14.44□□□□□ -0.1
CLCN4-203ENST00000421085 FKBP4Q02790 459 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLCN4-203ENST00000421085 MCM3P25205 808 aa14.44□□□□□ -0.1
CLCN4-203ENST00000421085 PRPF40BQ6NWY9 871 aaKnown RBP14.43□□□□□ -0.1
CLCN4-203ENST00000421085 ZNF397Q8NF99 534 aaPredicted RBP14.43□□□□□ -0.1
CLCN4-203ENST00000421085 RAI14Q9P0K7 980 aa14.43□□□□□ -0.1
CLCN4-203ENST00000421085 NEMFO60524 1076 aa14.43□□□□□ -0.1
CLCN4-203ENST00000421085 BAG4O95429 457 aaKnown RBP14.43□□□□□ -0.1
CLCN4-203ENST00000421085 TIGD1Q96MW7 591 aa14.43□□□□□ -0.1
CLCN4-203ENST00000421085 EZRP15311 586 aaKnown RBP14.43□□□□□ -0.1
CLCN4-203ENST00000421085 GBP2P32456 591 aaPredicted RBP14.43□□□□□ -0.1
CLCN4-203ENST00000421085 SPA17Q15506 151 aa14.43□□□□□ -0.1
CLCN4-203ENST00000421085 PLEKHO1Q53GL0 409 aaPredicted RBP14.43□□□□□ -0.1
CLCN4-203ENST00000421085 LMAN1P49257 510 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 FAM107BQ9H098 131 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 PLEKHH1Q9ULM0 1364 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 MX1P20591 662 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 ZSCAN23Q3MJ62 389 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 GOLGA6L10A0A0M3HER8 536 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 CCDC113Q9H0I3 377 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 CTNNA3Q9UI47 895 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 RARSP54136 660 aaKnown RBP14.42□□□□□ -0.1
CLCN4-203ENST00000421085 BMS1Q14692 1282 aaKnown RBP14.42□□□□□ -0.1
CLCN4-203ENST00000421085 IMMTQ16891 758 aaKnown RBP14.42□□□□□ -0.1
CLCN4-203ENST00000421085 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 CEP135Q66GS9 1140 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 KIF6Q6ZMV9 814 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 CASKIN1Q8WXD9 1431 aa14.42□□□□□ -0.1
CLCN4-203ENST00000421085 TMEM132AQ24JP5 1023 aa14.41□□□□□ -0.1
CLCN4-203ENST00000421085 MICALCLQ6ZW33 695 aa14.41□□□□□ -0.1
CLCN4-203ENST00000421085 SLC26A8Q96RN1 970 aa14.41□□□□□ -0.1
CLCN4-203ENST00000421085 KLHL10Q6JEL2 608 aa14.41□□□□□ -0.1
CLCN4-203ENST00000421085 ZFP91Q96JP5 570 aaPredicted RBP14.41□□□□□ -0.1
CLCN4-203ENST00000421085 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
CLCN4-203ENST00000421085 SSBP05455 408 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLCN4-203ENST00000421085 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
CLCN4-203ENST00000421085 XRCC6P12956 609 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLCN4-203ENST00000421085 KLHL40Q2TBA0 621 aa14.41□□□□□ -0.1
CLCN4-203ENST00000421085 DDX54Q8TDD1 881 aaKnown RBP14.41□□□□□ -0.1
CLCN4-203ENST00000421085 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.41□□□□□ -0.1
CLCN4-203ENST00000421085 SNW1Q13573 536 aaKnown RBP14.41□□□□□ -0.1
CLCN4-203ENST00000421085 GSDMDP57764 484 aa14.4□□□□□ -0.1
CLCN4-203ENST00000421085 ZSCAN25Q6NSZ9 544 aa14.4□□□□□ -0.1
CLCN4-203ENST00000421085 WASF1Q92558 559 aa14.4□□□□□ -0.1
CLCN4-203ENST00000421085 PRAM1Q96QH2 718 aa14.4□□□□□ -0.1
CLCN4-203ENST00000421085 SH2B1Q9NRF2 756 aaPredicted RBP14.4□□□□□ -0.1
CLCN4-203ENST00000421085 CEP131Q9UPN4 1083 aa14.4□□□□□ -0.1
CLCN4-203ENST00000421085 CTAGE5O15320 804 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms