RNA–Protein interactions for RNA: ENST00000420831.1

SEMA3F-204, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-204ENST00000420831 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 RTN4Q9NQC3 1192 aaKnown RBP11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 KNSTRNQ9Y448 316 aa11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 RTL1A6NKG5 1358 aa11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 INSRP06213 1382 aa11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 PARP4Q9UKK3 1724 aaKnown RBP11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 RGPD2P0DJD1 1756 aa11.26□□□□□ -0.61
SEMA3F-204ENST00000420831 FAM208AQ9UK61 1670 aaKnown RBP11.25□□□□□ -0.61
SEMA3F-204ENST00000420831 EXOC5O00471 708 aa11.25□□□□□ -0.61
SEMA3F-204ENST00000420831 IL2RBP14784 551 aa11.25□□□□□ -0.61
SEMA3F-204ENST00000420831 EZH2Q15910 746 aaKnown RBP11.25□□□□□ -0.61
SEMA3F-204ENST00000420831 MORC1Q86VD1 984 aa11.25□□□□□ -0.61
SEMA3F-204ENST00000420831 PROM2Q8N271 834 aa11.25□□□□□ -0.61
SEMA3F-204ENST00000420831 FLT4P35916 1363 aa11.25□□□□□ -0.61
SEMA3F-204ENST00000420831 EIF4A2Q14240 407 aaKnown RBP11.24□□□□□ -0.61
SEMA3F-204ENST00000420831 ACSBG1Q96GR2 724 aa11.24□□□□□ -0.61
SEMA3F-204ENST00000420831 EYA1Q99502 592 aa11.24□□□□□ -0.61
SEMA3F-204ENST00000420831 WNK3Q9BYP7 1800 aa11.23□□□□□ -0.61
SEMA3F-204ENST00000420831 APBA3O96018 575 aa11.23□□□□□ -0.61
SEMA3F-204ENST00000420831 CCDC125Q86Z20 511 aa11.23□□□□□ -0.61
SEMA3F-204ENST00000420831 DDX54Q8TDD1 881 aaKnown RBP11.23□□□□□ -0.61
SEMA3F-204ENST00000420831 CAMKK2Q96RR4 588 aa11.23□□□□□ -0.61
SEMA3F-204ENST00000420831 TNS2Q63HR2 1409 aa11.23□□□□□ -0.61
SEMA3F-204ENST00000420831 TNS1Q9HBL0 1735 aaKnown RBP11.21□□□□□ -0.61
SEMA3F-204ENST00000420831 OVOS2A0A0G2JMS6 1433 aa11.21□□□□□ -0.61
SEMA3F-204ENST00000420831 AEBP1Q8IUX7 1158 aa11.21□□□□□ -0.61
SEMA3F-204ENST00000420831 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
SEMA3F-204ENST00000420831 SMG6Q86US8 1419 aaKnown RBP11.2□□□□□ -0.62
SEMA3F-204ENST00000420831 NSD2O96028 1365 aa11.2□□□□□ -0.62
SEMA3F-204ENST00000420831 KIF24Q5T7B8 1368 aa11.2□□□□□ -0.62
SEMA3F-204ENST00000420831 MTHFSP49914 203 aa11.2□□□□□ -0.62
SEMA3F-204ENST00000420831 SF3B2Q13435 895 aaKnown RBP11.2□□□□□ -0.62
SEMA3F-204ENST00000420831 ANKRD26Q9UPS8 1709 aa11.2□□□□□ -0.62
SEMA3F-204ENST00000420831 NCAPD2Q15021 1401 aa11.19□□□□□ -0.62
SEMA3F-204ENST00000420831 PSDA5PKW4 1024 aaPredicted RBP11.19□□□□□ -0.62
SEMA3F-204ENST00000420831 CYP27B1O15528 508 aa11.19□□□□□ -0.62
SEMA3F-204ENST00000420831 BAG6P46379 1132 aa11.19□□□□□ -0.62
SEMA3F-204ENST00000420831 ZCRB1Q8TBF4 217 aaKnown RBP11.19□□□□□ -0.62
SEMA3F-204ENST00000420831 MAP2P11137 1827 aaKnown RBP11.19□□□□□ -0.62
SEMA3F-204ENST00000420831 IL13P35225 146 aa11.18□□□□□ -0.62
SEMA3F-204ENST00000420831 BCL11BQ9C0K0 894 aaPredicted RBP11.18□□□□□ -0.62
SEMA3F-204ENST00000420831 BCL9O00512 1426 aa11.18□□□□□ -0.62
SEMA3F-204ENST00000420831 TATP17735 454 aaPredicted RBP11.17□□□□□ -0.62
SEMA3F-204ENST00000420831 SHANK3Q9BYB0 1731 aa11.17□□□□□ -0.62
SEMA3F-204ENST00000420831 IGSF1Q8N6C5 1336 aa11.16□□□□□ -0.62
SEMA3F-204ENST00000420831 RGPD1P0DJD0 1748 aa11.16□□□□□ -0.62
SEMA3F-204ENST00000420831 PRIM1P49642 420 aaKnown RBP11.16□□□□□ -0.62
SEMA3F-204ENST00000420831 KCNQ4P56696 695 aa11.16□□□□□ -0.62
SEMA3F-204ENST00000420831 RAPGEF4Q8WZA2 1011 aa11.16□□□□□ -0.62
SEMA3F-204ENST00000420831 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
SEMA3F-204ENST00000420831 FBXO3Q9UK99 471 aa11.16□□□□□ -0.62
SEMA3F-204ENST00000420831 DDX10Q13206 875 aaKnown RBP11.15□□□□□ -0.62
SEMA3F-204ENST00000420831 R3HDM1Q15032 1099 aaKnown RBP11.15□□□□□ -0.62
SEMA3F-204ENST00000420831 NPC1L1Q9UHC9 1359 aa11.15□□□□□ -0.63
SEMA3F-204ENST00000420831 SBF2Q86WG5 1849 aa11.14□□□□□ -0.63
SEMA3F-204ENST00000420831 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
SEMA3F-204ENST00000420831 PDGFDQ9GZP0 370 aaPredicted RBP11.14□□□□□ -0.63
SEMA3F-204ENST00000420831 LRRC4BQ9NT99 713 aa11.14□□□□□ -0.63
SEMA3F-204ENST00000420831 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
SEMA3F-204ENST00000420831 PLSCR1O15162 318 aa11.13□□□□□ -0.63
SEMA3F-204ENST00000420831 HMOX1P09601 288 aa11.13□□□□□ -0.63
SEMA3F-204ENST00000420831 PPP2R1AP30153 589 aa11.13□□□□□ -0.63
SEMA3F-204ENST00000420831 SYTL4Q96C24 671 aaPredicted RBP11.13□□□□□ -0.63
SEMA3F-204ENST00000420831 TXNRD1Q16881 649 aa11.12□□□□□ -0.63
SEMA3F-204ENST00000420831 PHKG2P15735 406 aa11.11□□□□□ -0.63
SEMA3F-204ENST00000420831 NHSQ6T4R5 1651 aa11.11□□□□□ -0.63
SEMA3F-204ENST00000420831 PCDH11XQ9BZA7 1347 aa11.1□□□□□ -0.63
SEMA3F-204ENST00000420831 PCDH11YQ9BZA8 1340 aa11.1□□□□□ -0.63
SEMA3F-204ENST00000420831 DIAPH1O60610 1272 aaKnown RBP11.1□□□□□ -0.63
SEMA3F-204ENST00000420831 NKX1-1Q15270 411 aaPredicted RBP11.1□□□□□ -0.63
SEMA3F-204ENST00000420831 PIGBQ92521 554 aa11.1□□□□□ -0.63
SEMA3F-204ENST00000420831 RREB1Q92766 1687 aa11.1□□□□□ -0.63
SEMA3F-204ENST00000420831 NUP188Q5SRE5 1749 aa11.09□□□□□ -0.63
SEMA3F-204ENST00000420831 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
SEMA3F-204ENST00000420831 KDRP35968 1356 aa11.09□□□□□ -0.63
SEMA3F-204ENST00000420831 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
SEMA3F-204ENST00000420831 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
SEMA3F-204ENST00000420831 SPG7Q9UQ90 795 aa11.09□□□□□ -0.63
SEMA3F-204ENST00000420831 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
SEMA3F-204ENST00000420831 DOT1LQ8TEK3 1739 aa11.09□□□□□ -0.63
SEMA3F-204ENST00000420831 SMIM5Q71RC9 77 aa11.08□□□□□ -0.64
SEMA3F-204ENST00000420831 KDM6AO15550 1401 aaPredicted RBP11.08□□□□□ -0.64
SEMA3F-204ENST00000420831 BTAF1O14981 1849 aa11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 PARD3Q8TEW0 1356 aa11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 U2SURPO15042 1029 aaKnown RBP11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 MTHFSDQ2M296 383 aaKnown RBP11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 ZNF530Q6P9A1 599 aaPredicted RBP11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 IFNL2Q8IZJ0 200 aa11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 LGR6Q9HBX8 967 aa11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 ASAP1Q9ULH1 1129 aa11.07□□□□□ -0.64
SEMA3F-204ENST00000420831 SPDYE2BA6NHP3 402 aa11.06□□□□□ -0.64
SEMA3F-204ENST00000420831 SPDYE6P0CI01 402 aa11.06□□□□□ -0.64
SEMA3F-204ENST00000420831 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
SEMA3F-204ENST00000420831 PLEKHO1Q53GL0 409 aaPredicted RBP11.06□□□□□ -0.64
SEMA3F-204ENST00000420831 AMIGO3Q86WK7 504 aa11.06□□□□□ -0.64
SEMA3F-204ENST00000420831 SLC4A9Q96Q91 983 aa11.05□□□□□ -0.64
SEMA3F-204ENST00000420831 VASPP50552 380 aaPredicted RBP11.04□□□□□ -0.64
SEMA3F-204ENST00000420831 SLC15A2Q16348 729 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms