RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.9
BDNF-209ENST00000420794 EXOC5O00471 708 aa9.4□□□□□ -0.9
BDNF-209ENST00000420794 CCDC30Q5VVM6 783 aa9.4□□□□□ -0.9
BDNF-209ENST00000420794 USP32Q8NFA0 1604 aa9.4□□□□□ -0.91
BDNF-209ENST00000420794 FAM83GA6ND36 823 aa9.4□□□□□ -0.91
BDNF-209ENST00000420794 IL2RBP14784 551 aa9.4□□□□□ -0.91
BDNF-209ENST00000420794 MPRIPQ6WCQ1 1025 aa9.4□□□□□ -0.91
BDNF-209ENST00000420794 ZCRB1Q8TBF4 217 aaKnown RBP9.4□□□□□ -0.91
BDNF-209ENST00000420794 CERKQ8TCT0 537 aa9.4□□□□□ -0.91
BDNF-209ENST00000420794 SOS2Q07890 1332 aaPredicted RBP9.39□□□□□ -0.91
BDNF-209ENST00000420794 DZIP1LQ8IYY4 767 aaKnown RBP9.39□□□□□ -0.91
BDNF-209ENST00000420794 PLEKHF1Q96S99 279 aa9.39□□□□□ -0.91
BDNF-209ENST00000420794 C8orf37Q96NL8 207 aa9.39□□□□□ -0.91
BDNF-209ENST00000420794 TCERG1O14776 1098 aaKnown RBP9.38□□□□□ -0.91
BDNF-209ENST00000420794 B4GALNT3Q6L9W6 998 aa9.38□□□□□ -0.91
BDNF-209ENST00000420794 HDAC5Q9UQL6 1122 aa9.38□□□□□ -0.91
BDNF-209ENST00000420794 SETD1AO15047 1707 aaKnown RBP9.38□□□□□ -0.91
BDNF-209ENST00000420794 ERBB3P21860 1342 aa9.38□□□□□ -0.91
BDNF-209ENST00000420794 MAP3K5Q99683 1374 aa9.38□□□□□ -0.91
BDNF-209ENST00000420794 SLC4A10Q6U841 1118 aa9.38□□□□□ -0.91
BDNF-209ENST00000420794 NECTIN2Q92692 538 aa9.38□□□□□ -0.91
BDNF-209ENST00000420794 USP19O94966 1318 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 HDGFL1Q5TGJ6 251 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 TRIM35Q9UPQ4 493 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
BDNF-209ENST00000420794 BCAR3O75815 825 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 DDX58O95786 925 aaKnown RBP9.37□□□□□ -0.91
BDNF-209ENST00000420794 PDE3AQ14432 1141 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
BDNF-209ENST00000420794 MBIPQ9NS73 344 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 MIS18AQ9NYP9 233 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 DDX19BQ9UMR2 479 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 NWD1Q149M9 1564 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 FKBP5Q13451 457 aaPredicted RBP9.37□□□□□ -0.91
BDNF-209ENST00000420794 ALDH1L2Q3SY69 923 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 COG6Q9Y2V7 657 aa9.37□□□□□ -0.91
BDNF-209ENST00000420794 AAMPQ13685 434 aa9.36□□□□□ -0.91
BDNF-209ENST00000420794 CRBNQ96SW2 442 aa9.36□□□□□ -0.91
BDNF-209ENST00000420794 SSH2Q76I76 1423 aa9.36□□□□□ -0.91
BDNF-209ENST00000420794 RARSP54136 660 aaKnown RBP9.36□□□□□ -0.91
BDNF-209ENST00000420794 FMN2Q9NZ56 1722 aa9.36□□□□□ -0.91
BDNF-209ENST00000420794 EXOC6Q8TAG9 804 aa9.36□□□□□ -0.91
BDNF-209ENST00000420794 RWDD1Q9H446 243 aaPredicted RBP9.36□□□□□ -0.91
BDNF-209ENST00000420794 PODXL2Q9NZ53 605 aa9.36□□□□□ -0.91
BDNF-209ENST00000420794 WDR17Q8IZU2 1322 aa9.36□□□□□ -0.91
BDNF-209ENST00000420794 DCAF5Q96JK2 942 aa9.35□□□□□ -0.91
BDNF-209ENST00000420794 TMOD3Q9NYL9 352 aa9.35□□□□□ -0.91
BDNF-209ENST00000420794 SLC4A2P04920 1241 aa9.35□□□□□ -0.91
BDNF-209ENST00000420794 CARD10Q9BWT7 1032 aa9.35□□□□□ -0.91
BDNF-209ENST00000420794 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.91
BDNF-209ENST00000420794 PCDH11XQ9BZA7 1347 aa9.35□□□□□ -0.91
BDNF-209ENST00000420794 PCDH11YQ9BZA8 1340 aa9.35□□□□□ -0.91
BDNF-209ENST00000420794 KIF1AQ12756 1690 aa9.35□□□□□ -0.91
BDNF-209ENST00000420794 BABAM1Q9NWV8 329 aa9.35□□□□□ -0.91
BDNF-209ENST00000420794 KIF20BQ96Q89 1820 aa9.34□□□□□ -0.91
BDNF-209ENST00000420794 NEXNQ0ZGT2 675 aa9.34□□□□□ -0.91
BDNF-209ENST00000420794 DDB1Q16531 1140 aa9.34□□□□□ -0.91
BDNF-209ENST00000420794 ATF7IPQ6VMQ6 1270 aa9.34□□□□□ -0.91
BDNF-209ENST00000420794 NOB1Q9ULX3 412 aaKnown RBP9.34□□□□□ -0.91
BDNF-209ENST00000420794 AXIN2Q9Y2T1 843 aa9.34□□□□□ -0.91
BDNF-209ENST00000420794 RNMTO43148 476 aaKnown RBP9.34□□□□□ -0.91
BDNF-209ENST00000420794 SSH1Q8WYL5 1049 aa9.34□□□□□ -0.91
BDNF-209ENST00000420794 LARP1Q6PKG0 1096 aaKnown RBP9.33□□□□□ -0.92
BDNF-209ENST00000420794 PANK1Q8TE04 598 aa9.33□□□□□ -0.92
BDNF-209ENST00000420794 RBM42Q9BTD8 480 aaKnown RBP9.33□□□□□ -0.92
BDNF-209ENST00000420794 SPINK5Q9NQ38 1064 aaPredicted RBP9.33□□□□□ -0.92
BDNF-209ENST00000420794 ZNF521Q96K83 1311 aa9.33□□□□□ -0.92
BDNF-209ENST00000420794 FMNL2Q96PY5 1086 aa9.33□□□□□ -0.92
BDNF-209ENST00000420794 PHF23Q9BUL5 403 aaPredicted RBP9.33□□□□□ -0.92
BDNF-209ENST00000420794 NALCNQ8IZF0 1738 aa9.32□□□□□ -0.92
BDNF-209ENST00000420794 HMMRO75330 724 aa9.32□□□□□ -0.92
BDNF-209ENST00000420794 CHL1O00533 1208 aa9.32□□□□□ -0.92
BDNF-209ENST00000420794 JCADQ9P266 1359 aa9.32□□□□□ -0.92
BDNF-209ENST00000420794 SOS1Q07889 1333 aaPredicted RBP9.32□□□□□ -0.92
BDNF-209ENST00000420794 USP21Q9UK80 565 aa9.31□□□□□ -0.92
BDNF-209ENST00000420794 CPDO75976 1380 aa9.31□□□□□ -0.92
BDNF-209ENST00000420794 NPHP1O15259 732 aa9.31□□□□□ -0.92
BDNF-209ENST00000420794 RIC3Q7Z5B4 369 aa9.31□□□□□ -0.92
BDNF-209ENST00000420794 AIMP1Q12904 312 aaKnown RBP9.31□□□□□ -0.92
BDNF-209ENST00000420794 NFATC2IPQ8NCF5 419 aa9.31□□□□□ -0.92
BDNF-209ENST00000420794 MON2Q7Z3U7 1717 aa9.3□□□□□ -0.92
BDNF-209ENST00000420794 PTCD1O75127 700 aaKnown RBP9.3□□□□□ -0.92
BDNF-209ENST00000420794 C8orf58Q8NAV2 365 aa9.3□□□□□ -0.92
BDNF-209ENST00000420794 LGR6Q9HBX8 967 aa9.3□□□□□ -0.92
BDNF-209ENST00000420794 PHKG2P15735 406 aa9.3□□□□□ -0.92
BDNF-209ENST00000420794 OS9Q13438 667 aaPredicted RBP9.3□□□□□ -0.92
BDNF-209ENST00000420794 IL17REQ8NFR9 667 aa9.3□□□□□ -0.92
BDNF-209ENST00000420794 C9orf78Q9NZ63 289 aaPredicted RBP9.3□□□□□ -0.92
BDNF-209ENST00000420794 DBF4Q9UBU7 674 aaPredicted RBP9.3□□□□□ -0.92
BDNF-209ENST00000420794 VAMP4O75379 141 aa9.3□□□□□ -0.92
BDNF-209ENST00000420794 STARD3NLO95772 234 aa9.3□□□□□ -0.92
BDNF-209ENST00000420794 TEX13AQ9BXU3 409 aaPredicted RBP9.3□□□□□ -0.92
BDNF-209ENST00000420794 KDRP35968 1356 aa9.29□□□□□ -0.92
BDNF-209ENST00000420794 SNRPA1P09661 255 aaKnown RBP9.29□□□□□ -0.92
BDNF-209ENST00000420794 CCT4P50991 539 aaKnown RBP9.29□□□□□ -0.92
BDNF-209ENST00000420794 TRMT2AQ8IZ69 625 aaKnown RBP9.29□□□□□ -0.92
BDNF-209ENST00000420794 MAP2P11137 1827 aaKnown RBP9.29□□□□□ -0.92
BDNF-209ENST00000420794 CENPQQ7L2Z9 268 aaPredicted RBP9.29□□□□□ -0.92
BDNF-209ENST00000420794 HMGB2P26583 209 aaKnown RBP9.29□□□□□ -0.92
BDNF-209ENST00000420794 MVPQ14764 893 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms