RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 HSPA1AP0DMV8 641 aaKnown RBP13.26□□□□□ -0.29
TRIM39-206ENST00000420746 HSPA1BP0DMV9 641 aaKnown RBP13.26□□□□□ -0.29
TRIM39-206ENST00000420746 KCNQ4P56696 695 aa13.26□□□□□ -0.29
TRIM39-206ENST00000420746 DCAF11Q8TEB1 546 aa13.25□□□□□ -0.29
TRIM39-206ENST00000420746 NLRP2Q9NX02 1062 aa13.25□□□□□ -0.29
TRIM39-206ENST00000420746 CABP1Q9NZU7 370 aa13.25□□□□□ -0.29
TRIM39-206ENST00000420746 PLEKHG2Q9H7P9 1386 aa13.24□□□□□ -0.29
TRIM39-206ENST00000420746 TTC21AQ8NDW8 1320 aa13.24□□□□□ -0.29
TRIM39-206ENST00000420746 KDM2AQ9Y2K7 1162 aa13.24□□□□□ -0.29
TRIM39-206ENST00000420746 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
TRIM39-206ENST00000420746 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
TRIM39-206ENST00000420746 CABP2Q9NPB3 220 aa13.23□□□□□ -0.29
TRIM39-206ENST00000420746 PRIM1P49642 420 aaKnown RBP13.22□□□□□ -0.29
TRIM39-206ENST00000420746 SYTL4Q96C24 671 aaPredicted RBP13.22□□□□□ -0.29
TRIM39-206ENST00000420746 USP47Q96K76 1375 aa13.21□□□□□ -0.29
TRIM39-206ENST00000420746 PPARGC1BQ86YN6 1023 aaKnown RBP13.21□□□□□ -0.29
TRIM39-206ENST00000420746 NSD3Q9BZ95 1437 aa13.21□□□□□ -0.3
TRIM39-206ENST00000420746 SOX12O15370 315 aa13.2□□□□□ -0.3
TRIM39-206ENST00000420746 SMC1BQ8NDV3 1235 aa13.2□□□□□ -0.3
TRIM39-206ENST00000420746 DDX54Q8TDD1 881 aaKnown RBP13.2□□□□□ -0.3
TRIM39-206ENST00000420746 USP54Q70EL1 1684 aa13.2□□□□□ -0.3
TRIM39-206ENST00000420746 DOT1LQ8TEK3 1739 aa13.19□□□□□ -0.3
TRIM39-206ENST00000420746 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
TRIM39-206ENST00000420746 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
TRIM39-206ENST00000420746 C5P01031 1676 aa13.19□□□□□ -0.3
TRIM39-206ENST00000420746 PXDNLA1KZ92 1463 aa13.19□□□□□ -0.3
TRIM39-206ENST00000420746 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
TRIM39-206ENST00000420746 ANKRD24Q8TF21 1146 aa13.18□□□□□ -0.3
TRIM39-206ENST00000420746 KIAA1210Q9ULL0 1709 aa13.18□□□□□ -0.3
TRIM39-206ENST00000420746 USP31Q70CQ4 1352 aa13.18□□□□□ -0.3
TRIM39-206ENST00000420746 TGFB2P61812 414 aa13.17□□□□□ -0.3
TRIM39-206ENST00000420746 PRDM10Q9NQV6 1147 aa13.15□□□□□ -0.3
TRIM39-206ENST00000420746 BCS1LQ9Y276 419 aa13.15□□□□□ -0.3
TRIM39-206ENST00000420746 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.31
TRIM39-206ENST00000420746 FAM208AQ9UK61 1670 aaKnown RBP13.15□□□□□ -0.31
TRIM39-206ENST00000420746 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
TRIM39-206ENST00000420746 SSFA2P28290 1259 aa13.14□□□□□ -0.31
TRIM39-206ENST00000420746 C9orf131Q5VYM1 1079 aa13.14□□□□□ -0.31
TRIM39-206ENST00000420746 ARHGAP27Q6ZUM4 889 aa13.14□□□□□ -0.31
TRIM39-206ENST00000420746 KIAA1551Q9HCM1 1747 aa13.13□□□□□ -0.31
TRIM39-206ENST00000420746 KIF13BQ9NQT8 1826 aa13.13□□□□□ -0.31
TRIM39-206ENST00000420746 AK7Q96M32 723 aa13.13□□□□□ -0.31
TRIM39-206ENST00000420746 C4BP0C0L5 1744 aa13.13□□□□□ -0.31
TRIM39-206ENST00000420746 TOGARAM1Q9Y4F4 1720 aa13.13□□□□□ -0.31
TRIM39-206ENST00000420746 PALLDQ8WX93 1383 aa13.12□□□□□ -0.31
TRIM39-206ENST00000420746 TAF1LQ8IZX4 1826 aa13.12□□□□□ -0.31
TRIM39-206ENST00000420746 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
TRIM39-206ENST00000420746 ZCRB1Q8TBF4 217 aaKnown RBP13.12□□□□□ -0.31
TRIM39-206ENST00000420746 EVC2Q86UK5 1308 aa13.12□□□□□ -0.31
TRIM39-206ENST00000420746 ZC3H4Q9UPT8 1303 aaKnown RBP13.12□□□□□ -0.31
TRIM39-206ENST00000420746 PKD1L3Q7Z443 1732 aa13.11□□□□□ -0.31
TRIM39-206ENST00000420746 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.11□□□□□ -0.31
TRIM39-206ENST00000420746 AMIGO3Q86WK7 504 aa13.11□□□□□ -0.31
TRIM39-206ENST00000420746 RRAGCQ9HB90 399 aa13.11□□□□□ -0.31
TRIM39-206ENST00000420746 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
TRIM39-206ENST00000420746 LTN1O94822 1766 aa13.1□□□□□ -0.31
TRIM39-206ENST00000420746 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
TRIM39-206ENST00000420746 CGNL1Q0VF96 1302 aa13.09□□□□□ -0.31
TRIM39-206ENST00000420746 FCHSD2O94868 740 aa13.08□□□□□ -0.32
TRIM39-206ENST00000420746 PHF14O94880 888 aa13.08□□□□□ -0.32
TRIM39-206ENST00000420746 MMP10P09238 476 aa13.08□□□□□ -0.32
TRIM39-206ENST00000420746 NBPF1Q3BBV0 1214 aa13.08□□□□□ -0.32
TRIM39-206ENST00000420746 IP6K1Q92551 441 aa13.08□□□□□ -0.32
TRIM39-206ENST00000420746 SMARCC1Q92922 1105 aaPredicted RBP13.08□□□□□ -0.32
TRIM39-206ENST00000420746 A0A0G2JLW4 131 aa13.07□□□□□ -0.32
TRIM39-206ENST00000420746 RNF181Q9P0P0 153 aa13.07□□□□□ -0.32
TRIM39-206ENST00000420746 MON2Q7Z3U7 1717 aa13.07□□□□□ -0.32
TRIM39-206ENST00000420746 MEGF6O75095 1541 aa13.07□□□□□ -0.32
TRIM39-206ENST00000420746 FOXN1O15353 648 aa13.06□□□□□ -0.32
TRIM39-206ENST00000420746 RGS19P49795 217 aa13.06□□□□□ -0.32
TRIM39-206ENST00000420746 DCAF5Q96JK2 942 aa13.06□□□□□ -0.32
TRIM39-206ENST00000420746 ARFGEF1Q9Y6D6 1849 aa13.06□□□□□ -0.32
TRIM39-206ENST00000420746 BRCA1P38398 1863 aaKnown RBP13.06□□□□□ -0.32
TRIM39-206ENST00000420746 N4BP2Q86UW6 1770 aaPredicted RBP13.05□□□□□ -0.32
TRIM39-206ENST00000420746 VEGFAP15692 232 aaPredicted RBP13.05□□□□□ -0.32
TRIM39-206ENST00000420746 DPEP1P16444 411 aa13.05□□□□□ -0.32
TRIM39-206ENST00000420746 CTCFP49711 727 aaPredicted RBP13.05□□□□□ -0.32
TRIM39-206ENST00000420746 MLLT1Q03111 559 aaPredicted RBP13.05□□□□□ -0.32
TRIM39-206ENST00000420746 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
TRIM39-206ENST00000420746 ABHD8Q96I13 439 aa13.04□□□□□ -0.32
TRIM39-206ENST00000420746 CCDC87Q9NVE4 849 aa13.04□□□□□ -0.32
TRIM39-206ENST00000420746 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
TRIM39-206ENST00000420746 KCNA3P22001 575 aa13.03□□□□□ -0.32
TRIM39-206ENST00000420746 NME9Q86XW9 330 aa13.03□□□□□ -0.32
TRIM39-206ENST00000420746 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.03□□□□□ -0.32
TRIM39-206ENST00000420746 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
TRIM39-206ENST00000420746 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
TRIM39-206ENST00000420746 GLTPD2A6NH11 291 aa13.02□□□□□ -0.33
TRIM39-206ENST00000420746 SMIM5Q71RC9 77 aa13.02□□□□□ -0.33
TRIM39-206ENST00000420746 AIDAQ96BJ3 306 aa13.02□□□□□ -0.33
TRIM39-206ENST00000420746 PIM2Q9P1W9 311 aa13.02□□□□□ -0.33
TRIM39-206ENST00000420746 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
TRIM39-206ENST00000420746 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
TRIM39-206ENST00000420746 PCDH11XQ9BZA7 1347 aa13.01□□□□□ -0.33
TRIM39-206ENST00000420746 PCDH11YQ9BZA8 1340 aa13.01□□□□□ -0.33
TRIM39-206ENST00000420746 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
TRIM39-206ENST00000420746 EDC4Q6P2E9 1401 aaKnown RBP13□□□□□ -0.33
TRIM39-206ENST00000420746 CNTNAP1P78357 1384 aa13□□□□□ -0.33
TRIM39-206ENST00000420746 GNPATO15228 680 aa13□□□□□ -0.33
TRIM39-206ENST00000420746 TMF1P82094 1093 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms