RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 PIK3R4Q99570 1358 aa11.15□□□□□ -0.62
SNCA-206ENST00000420646 SLC4A2P04920 1241 aa11.15□□□□□ -0.63
SNCA-206ENST00000420646 G2E3Q7L622 706 aa11.15□□□□□ -0.63
SNCA-206ENST00000420646 F6X3S4 739 aa11.14□□□□□ -0.63
SNCA-206ENST00000420646 SIRT2Q8IXJ6 389 aa11.14□□□□□ -0.63
SNCA-206ENST00000420646 NPHP4O75161 1426 aaPredicted RBP11.14□□□□□ -0.63
SNCA-206ENST00000420646 NALCNQ8IZF0 1738 aa11.14□□□□□ -0.63
SNCA-206ENST00000420646 IL17REQ8NFR9 667 aa11.14□□□□□ -0.63
SNCA-206ENST00000420646 ANKARQ7Z5J8 1434 aa11.13□□□□□ -0.63
SNCA-206ENST00000420646 CRB1P82279 1406 aa11.13□□□□□ -0.63
SNCA-206ENST00000420646 USP19O94966 1318 aa11.13□□□□□ -0.63
SNCA-206ENST00000420646 HDAC1Q13547 482 aaPredicted RBP11.13□□□□□ -0.63
SNCA-206ENST00000420646 SLC4A10Q6U841 1118 aa11.13□□□□□ -0.63
SNCA-206ENST00000420646 ARHGEF10O15013 1369 aa11.12□□□□□ -0.63
SNCA-206ENST00000420646 APBB1O00213 710 aa11.12□□□□□ -0.63
SNCA-206ENST00000420646 ZC3H6P61129 1189 aaKnown RBP11.12□□□□□ -0.63
SNCA-206ENST00000420646 AXIN2Q9Y2T1 843 aa11.12□□□□□ -0.63
SNCA-206ENST00000420646 ADAMTSL3P82987 1691 aa11.12□□□□□ -0.63
SNCA-206ENST00000420646 ANKRD45Q5TZF3 282 aa11.12□□□□□ -0.63
SNCA-206ENST00000420646 LGR6Q9HBX8 967 aa11.12□□□□□ -0.63
SNCA-206ENST00000420646 CHD2O14647 1828 aaKnown RBP11.12□□□□□ -0.63
SNCA-206ENST00000420646 KDRP35968 1356 aa11.12□□□□□ -0.63
SNCA-206ENST00000420646 GCP02774 474 aa11.11□□□□□ -0.63
SNCA-206ENST00000420646 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
SNCA-206ENST00000420646 AAMPQ13685 434 aa11.11□□□□□ -0.63
SNCA-206ENST00000420646 CABLES1Q8TDN4 633 aa11.11□□□□□ -0.63
SNCA-206ENST00000420646 ZNF428Q96B54 188 aa11.11□□□□□ -0.63
SNCA-206ENST00000420646 ABCC4O15439 1325 aa11.11□□□□□ -0.63
SNCA-206ENST00000420646 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
SNCA-206ENST00000420646 SMC5Q8IY18 1101 aa11.11□□□□□ -0.63
SNCA-206ENST00000420646 FMN2Q9NZ56 1722 aa11.11□□□□□ -0.63
SNCA-206ENST00000420646 ADGRL3Q9HAR2 1447 aa11.1□□□□□ -0.63
SNCA-206ENST00000420646 GAS2L2Q8NHY3 880 aa11.1□□□□□ -0.63
SNCA-206ENST00000420646 IP6K1Q92551 441 aa11.1□□□□□ -0.63
SNCA-206ENST00000420646 ARHGAP45Q92619 1136 aa11.1□□□□□ -0.63
SNCA-206ENST00000420646 RGPD1P0DJD0 1748 aa11.1□□□□□ -0.63
SNCA-206ENST00000420646 KRT28Q7Z3Y7 464 aa11.1□□□□□ -0.63
SNCA-206ENST00000420646 KCNQ3O43525 872 aa11.09□□□□□ -0.63
SNCA-206ENST00000420646 MEIS3Q99687 375 aa11.09□□□□□ -0.63
SNCA-206ENST00000420646 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
SNCA-206ENST00000420646 API5Q9BZZ5 524 aaKnown RBP11.09□□□□□ -0.63
SNCA-206ENST00000420646 CHD1LQ86WJ1 897 aa11.08□□□□□ -0.64
SNCA-206ENST00000420646 C16orf71Q8IYS4 520 aaPredicted RBP11.08□□□□□ -0.64
SNCA-206ENST00000420646 MFAP1P55081 439 aaKnown RBP11.08□□□□□ -0.64
SNCA-206ENST00000420646 NUCB1Q02818 461 aa11.08□□□□□ -0.64
SNCA-206ENST00000420646 MARF1Q9Y4F3 1742 aaKnown RBP11.08□□□□□ -0.64
SNCA-206ENST00000420646 EIF2S2P20042 333 aaKnown RBP11.07□□□□□ -0.64
SNCA-206ENST00000420646 PIP4K2BP78356 416 aa11.07□□□□□ -0.64
SNCA-206ENST00000420646 NWD1Q149M9 1564 aa11.07□□□□□ -0.64
SNCA-206ENST00000420646 ANXA1P04083 346 aa11.07□□□□□ -0.64
SNCA-206ENST00000420646 FBXO41Q8TF61 875 aa11.07□□□□□ -0.64
SNCA-206ENST00000420646 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
SNCA-206ENST00000420646 MSH6P52701 1360 aa11.07□□□□□ -0.64
SNCA-206ENST00000420646 DAXXQ9UER7 740 aaPredicted RBP11.07□□□□□ -0.64
SNCA-206ENST00000420646 RGS12O14924 1447 aa11.06□□□□□ -0.64
SNCA-206ENST00000420646 TMEM94Q12767 1356 aa11.06□□□□□ -0.64
SNCA-206ENST00000420646 ARHGEF25Q86VW2 580 aa11.06□□□□□ -0.64
SNCA-206ENST00000420646 SMARCA5O60264 1052 aaPredicted RBP11.06□□□□□ -0.64
SNCA-206ENST00000420646 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
SNCA-206ENST00000420646 OTUD7AQ8TE49 926 aaPredicted RBP11.06□□□□□ -0.64
SNCA-206ENST00000420646 ANKRD24Q8TF21 1146 aa11.06□□□□□ -0.64
SNCA-206ENST00000420646 ATF3P18847 181 aa11.05□□□□□ -0.64
SNCA-206ENST00000420646 FKBP5Q13451 457 aaPredicted RBP11.05□□□□□ -0.64
SNCA-206ENST00000420646 TAF7Q15545 349 aaPredicted RBP11.05□□□□□ -0.64
SNCA-206ENST00000420646 SPRYD3Q8NCJ5 442 aa11.05□□□□□ -0.64
SNCA-206ENST00000420646 CERKQ8TCT0 537 aa11.05□□□□□ -0.64
SNCA-206ENST00000420646 PHAXQ9H814 394 aaKnown RBP11.05□□□□□ -0.64
SNCA-206ENST00000420646 MAP3K5Q99683 1374 aa11.05□□□□□ -0.64
SNCA-206ENST00000420646 ZNF142P52746 1687 aaPredicted RBP11.05□□□□□ -0.64
SNCA-206ENST00000420646 INTS3Q68E01 1043 aaKnown RBP11.05□□□□□ -0.64
SNCA-206ENST00000420646 ZNF530Q6P9A1 599 aaPredicted RBP11.05□□□□□ -0.64
SNCA-206ENST00000420646 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
SNCA-206ENST00000420646 DDRGK1Q96HY6 314 aa11.05□□□□□ -0.64
SNCA-206ENST00000420646 KIAA0232Q92628 1395 aa11.05□□□□□ -0.64
SNCA-206ENST00000420646 PRAMEF22A3QJZ6 481 aa11.04□□□□□ -0.64
SNCA-206ENST00000420646 FLIIQ13045 1269 aa11.04□□□□□ -0.64
SNCA-206ENST00000420646 STK31Q9BXU1 1019 aa11.03□□□□□ -0.64
SNCA-206ENST00000420646 C1orf167Q5SNV9 1468 aa11.03□□□□□ -0.64
SNCA-206ENST00000420646 NFAT5O94916 1531 aa11.03□□□□□ -0.64
SNCA-206ENST00000420646 LTN1O94822 1766 aa11.03□□□□□ -0.64
SNCA-206ENST00000420646 CEP85Q6P2H3 762 aa11.03□□□□□ -0.64
SNCA-206ENST00000420646 LMTK3Q96Q04 1460 aa11.02□□□□□ -0.64
SNCA-206ENST00000420646 SLKQ9H2G2 1235 aaPredicted RBP11.02□□□□□ -0.64
SNCA-206ENST00000420646 ZNF335Q9H4Z2 1342 aaPredicted RBP11.02□□□□□ -0.65
SNCA-206ENST00000420646 HDGFL1Q5TGJ6 251 aa11.02□□□□□ -0.65
SNCA-206ENST00000420646 NLRP2Q9NX02 1062 aa11.02□□□□□ -0.65
SNCA-206ENST00000420646 RGPD2P0DJD1 1756 aa11.02□□□□□ -0.65
SNCA-206ENST00000420646 TBC1D32Q96NH3 1257 aa11.02□□□□□ -0.65
SNCA-206ENST00000420646 GCC1Q96CN9 775 aa11.01□□□□□ -0.65
SNCA-206ENST00000420646 RTL1A6NKG5 1358 aa11.01□□□□□ -0.65
SNCA-206ENST00000420646 PTPRCP08575 1304 aa11.01□□□□□ -0.65
SNCA-206ENST00000420646 UBAP1LF5GYI3 381 aa11.01□□□□□ -0.65
SNCA-206ENST00000420646 TEFQ10587 303 aa11.01□□□□□ -0.65
SNCA-206ENST00000420646 CCDC30Q5VVM6 783 aa11.01□□□□□ -0.65
SNCA-206ENST00000420646 TSHZ3Q63HK5 1081 aa11.01□□□□□ -0.65
SNCA-206ENST00000420646 UPF2Q9HAU5 1272 aaKnown RBP11.01□□□□□ -0.65
SNCA-206ENST00000420646 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
SNCA-206ENST00000420646 BTBD11A6QL63 1104 aa11□□□□□ -0.65
SNCA-206ENST00000420646 HTATSF1O43719 755 aaKnown RBP11□□□□□ -0.65
SNCA-206ENST00000420646 CHPF2Q9P2E5 772 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms