RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
AP000550.1-201ENST00000420508 SYNMO15061 1565 aa17.73■□□□□ 0.43
AP000550.1-201ENST00000420508 SRGAP3O43295 1099 aa17.73■□□□□ 0.43
AP000550.1-201ENST00000420508 ZSCAN25Q6NSZ9 544 aa17.73■□□□□ 0.43
AP000550.1-201ENST00000420508 CCDC47Q96A33 483 aaKnown RBP17.73■□□□□ 0.43
AP000550.1-201ENST00000420508 MX1P20591 662 aa17.72■□□□□ 0.43
AP000550.1-201ENST00000420508 CCDC158Q5M9N0 1113 aa17.72■□□□□ 0.43
AP000550.1-201ENST00000420508 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.72■□□□□ 0.43
AP000550.1-201ENST00000420508 PIK3R4Q99570 1358 aa17.72■□□□□ 0.43
AP000550.1-201ENST00000420508 ZNF396Q96N95 335 aaPredicted RBP17.72■□□□□ 0.43
AP000550.1-201ENST00000420508 APPP05067 770 aa17.72■□□□□ 0.43
AP000550.1-201ENST00000420508 TPM2P07951 284 aa17.72■□□□□ 0.43
AP000550.1-201ENST00000420508 LARP1Q6PKG0 1096 aaKnown RBP17.72■□□□□ 0.43
AP000550.1-201ENST00000420508 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
AP000550.1-201ENST00000420508 ANKRD20A12PQ8NF67 263 aa17.71■□□□□ 0.43
AP000550.1-201ENST00000420508 TSPY26PQ9H489 355 aa17.71■□□□□ 0.43
AP000550.1-201ENST00000420508 XBP1P17861 261 aa17.71■□□□□ 0.43
AP000550.1-201ENST00000420508 SART3Q15020 963 aaKnown RBP17.71■□□□□ 0.43
AP000550.1-201ENST00000420508 ACEP12821 1306 aa17.71■□□□□ 0.42
AP000550.1-201ENST00000420508 TTC37Q6PGP7 1564 aa17.7■□□□□ 0.42
AP000550.1-201ENST00000420508 HYPKQ9NX55 129 aa17.7■□□□□ 0.42
AP000550.1-201ENST00000420508 HMGB2P26583 209 aaKnown RBP17.7■□□□□ 0.42
AP000550.1-201ENST00000420508 TBC1D32Q96NH3 1257 aa17.7■□□□□ 0.42
AP000550.1-201ENST00000420508 MBIPQ9NS73 344 aa17.7■□□□□ 0.42
AP000550.1-201ENST00000420508 G3V3G9 751 aa17.7■□□□□ 0.42
AP000550.1-201ENST00000420508 DCAF8Q5TAQ9 597 aa17.7■□□□□ 0.42
AP000550.1-201ENST00000420508 MCM10Q7L590 875 aa17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 KDM6BO15054 1643 aa17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 NUCB1Q02818 461 aa17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 WASHC4Q2M389 1173 aa17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 NFXL1Q6ZNB6 911 aa17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 VPS37DQ86XT2 251 aa17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 DBF4Q9UBU7 674 aaPredicted RBP17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 A0A1W2PP64 1363 aa17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 EDC4Q6P2E9 1401 aaKnown RBP17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 TSR1Q2NL82 804 aaKnown RBP17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 CTNNA3Q9UI47 895 aa17.69■□□□□ 0.42
AP000550.1-201ENST00000420508 ZMYM3Q14202 1370 aa17.68■□□□□ 0.42
AP000550.1-201ENST00000420508 MTERF4Q7Z6M4 381 aaKnown RBP17.68■□□□□ 0.42
AP000550.1-201ENST00000420508 TPD52L1Q16890 204 aaPredicted RBP17.68■□□□□ 0.42
AP000550.1-201ENST00000420508 CARD14Q9BXL6 1004 aa17.68■□□□□ 0.42
AP000550.1-201ENST00000420508 SIRT1Q96EB6 747 aa17.68■□□□□ 0.42
AP000550.1-201ENST00000420508 BRMS1Q9HCU9 246 aa17.68■□□□□ 0.42
AP000550.1-201ENST00000420508 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
AP000550.1-201ENST00000420508 PTPRTO14522 1441 aa17.67■□□□□ 0.42
AP000550.1-201ENST00000420508 CAVIN1Q6NZI2 390 aaKnown RBP17.67■□□□□ 0.42
AP000550.1-201ENST00000420508 FLT4P35916 1363 aa17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 IQGAP3Q86VI3 1631 aa17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 BABAM1Q9NWV8 329 aa17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 MSH5O43196 834 aa17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 DNAAF4Q8WXU2 420 aa17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 SH2B1Q9NRF2 756 aaPredicted RBP17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 PRDM15P57071 1507 aaPredicted RBP17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 KRT85P78386 507 aa17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 BLOC1S2Q6QNY1 142 aa17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 AACSQ86V21 672 aa17.66■□□□□ 0.42
AP000550.1-201ENST00000420508 PRPF40AO75400 957 aaKnown RBP17.65■□□□□ 0.42
AP000550.1-201ENST00000420508 FLIIQ13045 1269 aa17.65■□□□□ 0.42
AP000550.1-201ENST00000420508 JMYQ8N9B5 988 aa17.65■□□□□ 0.42
AP000550.1-201ENST00000420508 MLH3Q9UHC1 1453 aa17.65■□□□□ 0.42
AP000550.1-201ENST00000420508 MAP7D2Q96T17 732 aa17.65■□□□□ 0.42
AP000550.1-201ENST00000420508 FOXD4L6Q3SYB3 417 aaPredicted RBP17.64■□□□□ 0.42
AP000550.1-201ENST00000420508 TTC39AQ5SRH9 613 aa17.64■□□□□ 0.42
AP000550.1-201ENST00000420508 FOXD4L3Q6VB84 417 aaPredicted RBP17.64■□□□□ 0.42
AP000550.1-201ENST00000420508 IGHDP01880 384 aa17.64■□□□□ 0.41
AP000550.1-201ENST00000420508 MRPL50Q8N5N7 158 aaKnown RBP17.64■□□□□ 0.41
AP000550.1-201ENST00000420508 GNL3LQ9NVN8 582 aaKnown RBP17.64■□□□□ 0.41
AP000550.1-201ENST00000420508 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
AP000550.1-201ENST00000420508 HSP90AA2PQ14568 343 aaPredicted RBP17.64■□□□□ 0.41
AP000550.1-201ENST00000420508 TOM1L2Q6ZVM7 507 aa17.64■□□□□ 0.41
AP000550.1-201ENST00000420508 GRPEL1Q9HAV7 217 aa17.64■□□□□ 0.41
AP000550.1-201ENST00000420508 DNAJC2Q99543 621 aaKnown RBP17.63■□□□□ 0.41
AP000550.1-201ENST00000420508 PDRG1Q9NUG6 133 aa17.63■□□□□ 0.41
AP000550.1-201ENST00000420508 TET3O43151 1660 aa17.63■□□□□ 0.41
AP000550.1-201ENST00000420508 CROCC2H7BZ55 1655 aa17.63■□□□□ 0.41
AP000550.1-201ENST00000420508 KINO60870 393 aaKnown RBP17.63■□□□□ 0.41
AP000550.1-201ENST00000420508 PRDM11Q9NQV5 511 aa17.63■□□□□ 0.41
AP000550.1-201ENST00000420508 CDC42BPAQ5VT25 1732 aa17.63■□□□□ 0.41
AP000550.1-201ENST00000420508 SLC3A2P08195 630 aaKnown RBP17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 TTC22Q5TAA0 569 aa17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 SYTL4Q96C24 671 aaPredicted RBP17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 TBC1D2Q9BYX2 928 aa17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 UNC13BO14795 1591 aa17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 CCDC57Q2TAC2 916 aa17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 ANKRD44Q8N8A2 993 aa17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 CCDC192P0DO97 292 aa17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 AKAP2Q9Y2D5 859 aa17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
AP000550.1-201ENST00000420508 MARCH6O60337 910 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 CDKL5O76039 1030 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 SNX21Q969T3 373 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 CCP110O43303 1012 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 CEP126Q9P2H0 1117 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 NACAP1Q9BZK3 213 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 CFAP45Q9UL16 551 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 MAGI2Q86UL8 1455 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 OLFM4Q6UX06 510 aa17.61■□□□□ 0.41
AP000550.1-201ENST00000420508 HMGB1P09429 215 aaKnown RBP17.6■□□□□ 0.41
AP000550.1-201ENST00000420508 HMGN5P82970 282 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms