RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 AXDND1Q5T1B0 1012 aaPredicted RBP5.44□□□□□ -1.54
PTPN22-202ENST00000420377 FAM43BQ6ZT52 329 aaPredicted RBP5.44□□□□□ -1.54
PTPN22-202ENST00000420377 KRT27Q7Z3Y8 459 aa5.44□□□□□ -1.54
PTPN22-202ENST00000420377 GPBP1L1Q9HC44 474 aaPredicted RBP5.44□□□□□ -1.54
PTPN22-202ENST00000420377 ZNF777Q9ULD5 760 aaPredicted RBP5.44□□□□□ -1.54
PTPN22-202ENST00000420377 SPATA31A3Q5VYP0 1347 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 SLC34A2O95436 690 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 C1QTNF8P60827 252 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 FBXO22Q8NEZ5 403 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 LARP6Q9BRS8 491 aaKnown RBP5.43□□□□□ -1.54
PTPN22-202ENST00000420377 ALS2Q96Q42 1657 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 PLSCR1O15162 318 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 MAFGO15525 162 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 KCNQ2O43526 872 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 DNAJC2Q99543 621 aaKnown RBP5.43□□□□□ -1.54
PTPN22-202ENST00000420377 CDCA7Q9BWT1 371 aaPredicted RBP5.43□□□□□ -1.54
PTPN22-202ENST00000420377 SPON1Q9HCB6 807 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 CLTCL1P53675 1640 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 CICQ96RK0 1608 aaPredicted RBP5.43□□□□□ -1.54
PTPN22-202ENST00000420377 VPS8Q8N3P4 1428 aa5.43□□□□□ -1.54
PTPN22-202ENST00000420377 ARHGEF1Q92888 912 aaKnown RBP5.42□□□□□ -1.54
PTPN22-202ENST00000420377 CAMKK2Q96RR4 588 aa5.42□□□□□ -1.54
PTPN22-202ENST00000420377 TRPM3Q9HCF6 1732 aaPredicted RBP5.42□□□□□ -1.54
PTPN22-202ENST00000420377 PEAK1Q9H792 1746 aa5.42□□□□□ -1.54
PTPN22-202ENST00000420377 PRKAR2AP13861 404 aaKnown RBP5.42□□□□□ -1.54
PTPN22-202ENST00000420377 SLC16A10Q8TF71 515 aa5.42□□□□□ -1.54
PTPN22-202ENST00000420377 USP35Q9P2H5 1018 aa5.42□□□□□ -1.54
PTPN22-202ENST00000420377 TESPA1A2RU30 521 aaPredicted RBP5.41□□□□□ -1.54
PTPN22-202ENST00000420377 HSP90AA1P07900 732 aaKnown RBP5.41□□□□□ -1.54
PTPN22-202ENST00000420377 PPLO60437 1756 aa5.41□□□□□ -1.54
PTPN22-202ENST00000420377 ANKRD50Q9ULJ7 1429 aa5.41□□□□□ -1.54
PTPN22-202ENST00000420377 RGS3P49796 1198 aa5.4□□□□□ -1.54
PTPN22-202ENST00000420377 RBM26Q5T8P6 1007 aaKnown RBP5.4□□□□□ -1.54
PTPN22-202ENST00000420377 ZNF830Q96NB3 372 aaPredicted RBP5.4□□□□□ -1.54
PTPN22-202ENST00000420377 ITSN1Q15811 1721 aa5.4□□□□□ -1.54
PTPN22-202ENST00000420377 IFT172Q9UG01 1749 aa5.4□□□□□ -1.54
PTPN22-202ENST00000420377 ANAPC15P60006 121 aa5.4□□□□□ -1.55
PTPN22-202ENST00000420377 MLLT3P42568 568 aaPredicted RBP5.39□□□□□ -1.55
PTPN22-202ENST00000420377 IRX3P78415 501 aaPredicted RBP5.39□□□□□ -1.55
PTPN22-202ENST00000420377 MS4A4AQ96JQ5 239 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 C8orf37Q96NL8 207 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 CWC22Q9HCG8 908 aaKnown RBP5.39□□□□□ -1.55
PTPN22-202ENST00000420377 TMEM51Q9NW97 253 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 CPDO75976 1380 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 ZBTB7CA1YPR0 619 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 GPATCH11Q8N954 259 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 ZNF579Q8NAF0 562 aaKnown RBP5.39□□□□□ -1.55
PTPN22-202ENST00000420377 PDCL3Q9H2J4 239 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 NOP58Q9Y2X3 529 aaKnown RBP5.39□□□□□ -1.55
PTPN22-202ENST00000420377 SPATA31A5Q5VU36 1347 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 SPATA31A7Q8IWB4 1347 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 PLEKHG2Q9H7P9 1386 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 PATL2C9JE40 543 aaKnown RBP5.39□□□□□ -1.55
PTPN22-202ENST00000420377 SEPT12Q8IYM1 358 aa5.39□□□□□ -1.55
PTPN22-202ENST00000420377 WNK3Q9BYP7 1800 aa5.38□□□□□ -1.55
PTPN22-202ENST00000420377 FAM83GA6ND36 823 aa5.38□□□□□ -1.55
PTPN22-202ENST00000420377 GRIN3BO60391 1043 aa5.38□□□□□ -1.55
PTPN22-202ENST00000420377 HDAC5Q9UQL6 1122 aa5.38□□□□□ -1.55
PTPN22-202ENST00000420377 ZNF644Q9H582 1327 aaPredicted RBP5.38□□□□□ -1.55
PTPN22-202ENST00000420377 NLRP6P59044 892 aa5.38□□□□□ -1.55
PTPN22-202ENST00000420377 CEP120Q8N960 986 aa5.38□□□□□ -1.55
PTPN22-202ENST00000420377 USP54Q70EL1 1684 aa5.37□□□□□ -1.55
PTPN22-202ENST00000420377 ZMYND10O75800 440 aa5.37□□□□□ -1.55
PTPN22-202ENST00000420377 TRIM44Q96DX7 344 aaPredicted RBP5.37□□□□□ -1.55
PTPN22-202ENST00000420377 DDX27Q96GQ7 796 aaKnown RBP5.37□□□□□ -1.55
PTPN22-202ENST00000420377 SLC26A8Q96RN1 970 aa5.37□□□□□ -1.55
PTPN22-202ENST00000420377 PAPPAQ13219 1627 aa5.37□□□□□ -1.55
PTPN22-202ENST00000420377 NAIPQ13075 1403 aa5.37□□□□□ -1.55
PTPN22-202ENST00000420377 LMO7Q8WWI1 1683 aa5.36□□□□□ -1.55
PTPN22-202ENST00000420377 SMAP1Q8IYB5 467 aaPredicted RBP5.36□□□□□ -1.55
PTPN22-202ENST00000420377 KIF12Q96FN5 646 aa5.36□□□□□ -1.55
PTPN22-202ENST00000420377 ATP1B4Q9UN42 357 aaPredicted RBP5.36□□□□□ -1.55
PTPN22-202ENST00000420377 TRPC6Q9Y210 931 aa5.36□□□□□ -1.55
PTPN22-202ENST00000420377 PRELPP51888 382 aa5.36□□□□□ -1.55
PTPN22-202ENST00000420377 UTP14CQ5TAP6 766 aaKnown RBP5.36□□□□□ -1.55
PTPN22-202ENST00000420377 PHF12Q96QT6 1004 aa5.36□□□□□ -1.55
PTPN22-202ENST00000420377 OS9Q13438 667 aaPredicted RBP5.35□□□□□ -1.55
PTPN22-202ENST00000420377 NBPF20Q3BBV1 942 aa5.35□□□□□ -1.55
PTPN22-202ENST00000420377 SHANK3Q9BYB0 1731 aa5.35□□□□□ -1.55
PTPN22-202ENST00000420377 ANP32AP39687 249 aaKnown RBP5.35□□□□□ -1.55
PTPN22-202ENST00000420377 APLP1P51693 650 aa5.35□□□□□ -1.55
PTPN22-202ENST00000420377 TULP4Q9NRJ4 1543 aa5.35□□□□□ -1.55
PTPN22-202ENST00000420377 ARHGEF28Q8N1W1 1705 aaKnown RBP5.35□□□□□ -1.55
PTPN22-202ENST00000420377 ADCY9O60503 1353 aa5.35□□□□□ -1.55
PTPN22-202ENST00000420377 PHRF1Q9P1Y6 1649 aaKnown RBP5.35□□□□□ -1.55
PTPN22-202ENST00000420377 NRKQ7Z2Y5 1582 aa5.34□□□□□ -1.55
PTPN22-202ENST00000420377 JMYQ8N9B5 988 aa5.34□□□□□ -1.55
PTPN22-202ENST00000420377 NHSQ6T4R5 1651 aa5.34□□□□□ -1.55
PTPN22-202ENST00000420377 ZNF316A6NFI3 1004 aaPredicted RBP5.34□□□□□ -1.55
PTPN22-202ENST00000420377 ZNF784Q8NCA9 323 aaPredicted RBP5.34□□□□□ -1.55
PTPN22-202ENST00000420377 ZNF526Q8TF50 670 aaPredicted RBP5.34□□□□□ -1.55
PTPN22-202ENST00000420377 NECTIN2Q92692 538 aa5.34□□□□□ -1.55
PTPN22-202ENST00000420377 METP08581 1390 aa5.34□□□□□ -1.56
PTPN22-202ENST00000420377 PAK3O75914 559 aaPredicted RBP5.33□□□□□ -1.56
PTPN22-202ENST00000420377 CCDC27Q2M243 656 aa5.33□□□□□ -1.56
PTPN22-202ENST00000420377 GPIHBP1Q8IV16 184 aa5.33□□□□□ -1.56
PTPN22-202ENST00000420377 CRISPLD2Q9H0B8 497 aa5.33□□□□□ -1.56
PTPN22-202ENST00000420377 SBF2Q86WG5 1849 aa5.33□□□□□ -1.56
PTPN22-202ENST00000420377 OVOS2A0A0G2JMS6 1433 aa5.33□□□□□ -1.56
PTPN22-202ENST00000420377 OVOS2A0A0J9YW53 1432 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms