RNA–Protein interactions for RNA: ENST00000420115.6

CDV3-202, Transcript of CDV3 homolog, humanhuman

TSL 2 BASIC

Gene CDV3, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-202ENST00000420115 CWC22Q9HCG8 908 aaKnown RBP12.33□□□□□ -0.44
CDV3-202ENST00000420115 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
CDV3-202ENST00000420115 PKP1Q13835 747 aa12.33□□□□□ -0.44
CDV3-202ENST00000420115 PTCH1Q13635 1447 aa12.32□□□□□ -0.44
CDV3-202ENST00000420115 FAM193AP78312 1265 aa12.32□□□□□ -0.44
CDV3-202ENST00000420115 GPT2Q8TD30 523 aa12.32□□□□□ -0.44
CDV3-202ENST00000420115 GGNBP2Q9H3C7 697 aa12.32□□□□□ -0.44
CDV3-202ENST00000420115 A0A1W2PP64 1363 aa12.32□□□□□ -0.44
CDV3-202ENST00000420115 PRPF40AO75400 957 aaKnown RBP12.31□□□□□ -0.44
CDV3-202ENST00000420115 CABP2Q9NPB3 220 aa12.31□□□□□ -0.44
CDV3-202ENST00000420115 CAPN2P17655 700 aa12.31□□□□□ -0.44
CDV3-202ENST00000420115 C17orf53Q8N3J3 647 aaPredicted RBP12.31□□□□□ -0.44
CDV3-202ENST00000420115 MRPL50Q8N5N7 158 aaKnown RBP12.31□□□□□ -0.44
CDV3-202ENST00000420115 USP26Q9BXU7 913 aa12.31□□□□□ -0.44
CDV3-202ENST00000420115 DNAJC2Q99543 621 aaKnown RBP12.31□□□□□ -0.44
CDV3-202ENST00000420115 GLI2P10070 1586 aa12.31□□□□□ -0.44
CDV3-202ENST00000420115 CHD1O14646 1710 aa12.3□□□□□ -0.44
CDV3-202ENST00000420115 DIAPH1O60610 1272 aaKnown RBP12.3□□□□□ -0.44
CDV3-202ENST00000420115 LRSAM1Q6UWE0 723 aa12.3□□□□□ -0.44
CDV3-202ENST00000420115 PLEKHM2Q8IWE5 1019 aa12.3□□□□□ -0.44
CDV3-202ENST00000420115 RBM27Q9P2N5 1060 aaKnown RBP12.3□□□□□ -0.44
CDV3-202ENST00000420115 CCDC39Q9UFE4 941 aa12.3□□□□□ -0.44
CDV3-202ENST00000420115 LMTK2Q8IWU2 1503 aa12.3□□□□□ -0.44
CDV3-202ENST00000420115 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
CDV3-202ENST00000420115 ARHGEF28Q8N1W1 1705 aaKnown RBP12.3□□□□□ -0.44
CDV3-202ENST00000420115 VAMP4O75379 141 aa12.3□□□□□ -0.44
CDV3-202ENST00000420115 ABCC4O15439 1325 aa12.3□□□□□ -0.44
CDV3-202ENST00000420115 TAF3Q5VWG9 929 aa12.29□□□□□ -0.44
CDV3-202ENST00000420115 TTC22Q5TAA0 569 aa12.29□□□□□ -0.44
CDV3-202ENST00000420115 UHRF1BP1LA0JNW5 1464 aa12.29□□□□□ -0.44
CDV3-202ENST00000420115 RPGRIP1LQ68CZ1 1315 aa12.29□□□□□ -0.44
CDV3-202ENST00000420115 ST18O60284 1047 aa12.29□□□□□ -0.44
CDV3-202ENST00000420115 TMEM63CQ9P1W3 806 aa12.29□□□□□ -0.44
CDV3-202ENST00000420115 FCHSD2O94868 740 aa12.28□□□□□ -0.44
CDV3-202ENST00000420115 INTS3Q68E01 1043 aaKnown RBP12.28□□□□□ -0.44
CDV3-202ENST00000420115 ZGPATQ8N5A5 531 aaKnown RBP12.28□□□□□ -0.44
CDV3-202ENST00000420115 ZDHHC9Q9Y397 364 aa12.28□□□□□ -0.44
CDV3-202ENST00000420115 PNPLA6Q8IY17 1366 aa12.28□□□□□ -0.44
CDV3-202ENST00000420115 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
CDV3-202ENST00000420115 SYCE3A1L190 88 aa12.28□□□□□ -0.44
CDV3-202ENST00000420115 FYB1O15117 783 aa12.28□□□□□ -0.44
CDV3-202ENST00000420115 TNNT3P45378 269 aaPredicted RBP12.28□□□□□ -0.44
CDV3-202ENST00000420115 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
CDV3-202ENST00000420115 PDCL2Q8N4E4 241 aa12.28□□□□□ -0.44
CDV3-202ENST00000420115 LRRC7Q96NW7 1537 aa12.27□□□□□ -0.45
CDV3-202ENST00000420115 TNNT1P13805 278 aa12.27□□□□□ -0.45
CDV3-202ENST00000420115 TSPYL6Q8N831 410 aa12.26□□□□□ -0.45
CDV3-202ENST00000420115 DCTPP1Q9H773 170 aa12.26□□□□□ -0.45
CDV3-202ENST00000420115 ABCA9Q8IUA7 1624 aa12.26□□□□□ -0.45
CDV3-202ENST00000420115 PTMAP06454 111 aaKnown RBP12.26□□□□□ -0.45
CDV3-202ENST00000420115 PSEN1P49768 467 aa12.26□□□□□ -0.45
CDV3-202ENST00000420115 CDC42BPGQ6DT37 1551 aa12.25□□□□□ -0.45
CDV3-202ENST00000420115 FAM135BQ49AJ0 1406 aa12.25□□□□□ -0.45
CDV3-202ENST00000420115 MBD3O95983 291 aa12.25□□□□□ -0.45
CDV3-202ENST00000420115 PRKAR2BP31323 418 aa12.25□□□□□ -0.45
CDV3-202ENST00000420115 NSFL1CQ9UNZ2 370 aaKnown RBP12.25□□□□□ -0.45
CDV3-202ENST00000420115 NPATQ14207 1427 aa12.25□□□□□ -0.45
CDV3-202ENST00000420115 BCCIPQ9P287 314 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDV3-202ENST00000420115 SRPK2P78362 688 aaKnown RBP12.25□□□□□ -0.45
CDV3-202ENST00000420115 SAFB2Q14151 953 aaKnown RBP eCLIP12.25□□□□□ -0.45
CDV3-202ENST00000420115 CASC1Q6TDU7 716 aa12.25□□□□□ -0.45
CDV3-202ENST00000420115 RNF214Q8ND24 703 aa12.25□□□□□ -0.45
CDV3-202ENST00000420115 TOMM22Q9NS69 142 aa12.25□□□□□ -0.45
CDV3-202ENST00000420115 CFAP65Q6ZU64 1925 aaKnown RBP12.25□□□□□ -0.45
CDV3-202ENST00000420115 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
CDV3-202ENST00000420115 API5Q9BZZ5 524 aaKnown RBP12.24□□□□□ -0.45
CDV3-202ENST00000420115 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
CDV3-202ENST00000420115 KNDC1Q76NI1 1749 aa12.24□□□□□ -0.45
CDV3-202ENST00000420115 GNAI1P63096 354 aa12.24□□□□□ -0.45
CDV3-202ENST00000420115 C16orf71Q8IYS4 520 aaPredicted RBP12.24□□□□□ -0.45
CDV3-202ENST00000420115 TIGD1Q96MW7 591 aa12.24□□□□□ -0.45
CDV3-202ENST00000420115 BCL2L12Q9HB09 334 aa12.24□□□□□ -0.45
CDV3-202ENST00000420115 ELL2O00472 640 aaPredicted RBP12.24□□□□□ -0.45
CDV3-202ENST00000420115 CHAMP1Q96JM3 812 aa12.24□□□□□ -0.45
CDV3-202ENST00000420115 IFT57Q9NWB7 429 aa12.24□□□□□ -0.45
CDV3-202ENST00000420115 CAMSAP1Q5T5Y3 1602 aa12.24□□□□□ -0.45
CDV3-202ENST00000420115 KIF24Q5T7B8 1368 aa12.23□□□□□ -0.45
CDV3-202ENST00000420115 NFE2L2Q16236 605 aa12.23□□□□□ -0.45
CDV3-202ENST00000420115 THUMPD2Q9BTF0 503 aaKnown RBP12.23□□□□□ -0.45
CDV3-202ENST00000420115 ZFYVE9O95405 1425 aa12.23□□□□□ -0.45
CDV3-202ENST00000420115 REC8O95072 547 aa12.23□□□□□ -0.45
CDV3-202ENST00000420115 SDSP20132 328 aa12.23□□□□□ -0.45
CDV3-202ENST00000420115 KIAA2012Q0VF49 1180 aa12.23□□□□□ -0.45
CDV3-202ENST00000420115 MYRIPQ8NFW9 859 aa12.23□□□□□ -0.45
CDV3-202ENST00000420115 YEATS2Q9ULM3 1422 aa12.23□□□□□ -0.45
CDV3-202ENST00000420115 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
CDV3-202ENST00000420115 ATAD2Q6PL18 1390 aa12.22□□□□□ -0.45
CDV3-202ENST00000420115 TWISTNBQ3B726 338 aaPredicted RBP12.22□□□□□ -0.45
CDV3-202ENST00000420115 FAM43BQ6ZT52 329 aaPredicted RBP12.22□□□□□ -0.45
CDV3-202ENST00000420115 GPATCH11Q8N954 259 aa12.22□□□□□ -0.45
CDV3-202ENST00000420115 CD163L1Q9NR16 1453 aa12.22□□□□□ -0.45
CDV3-202ENST00000420115 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
CDV3-202ENST00000420115 ZNF853P0CG23 659 aa12.22□□□□□ -0.45
CDV3-202ENST00000420115 OTUD7AQ8TE49 926 aaPredicted RBP12.22□□□□□ -0.45
CDV3-202ENST00000420115 KIDINS220Q9ULH0 1771 aa12.22□□□□□ -0.45
CDV3-202ENST00000420115 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
CDV3-202ENST00000420115 TSPY26PQ9H489 355 aa12.22□□□□□ -0.45
CDV3-202ENST00000420115 NUTM2DQ5VT03 806 aaPredicted RBP12.21□□□□□ -0.45
CDV3-202ENST00000420115 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.21□□□□□ -0.452e-12■■■□□ 16.5
CDV3-202ENST00000420115 CLGNO14967 610 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms